Os05g0511400

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Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0511400| Description = Similar to Protein kinase GhCLK1 (Fragment)| Version = NM_001062550.1 GI:115464830 GeneID:4339288| Length = 7712 bp|...")
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Gene Name

Os05g0511400

Description

Similar to Protein kinase GhCLK1 (Fragment)

Version

NM_001062550.1 GI:115464830 GeneID:4339288

Length

7712 bp

Definition

Oryza sativa Japonica Group Os05g0511400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25393119..25400830

Sequence Coding Region

25393429..25393550,25393640..25393696,25393808..25393892,25394297..25394344,25394631..25394744
,25394826..25394957,25395407..25395491,25395592..25395671,25396318..25396552
,25396628..25396869,25396955..25397038,25398076..25398250,25399565..25399776

Expression

GEO Profiles:Os05g0511400

Genome Context

<gbrowseImage1> name=NC_008398:25393119..25400830 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25393119..25400830 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattccgcgagaagttggttccagaagttccagccgagggacaaatcgaagagtccagcggtggctgccagtcatggaaaggatccaggaaagccaccaattgatgacgcgccatctagtgcaacaaaacagagggttgccgcggcaaaacagtacattgagaatcattacaagacccagatgaagtccctgcaagataggaaagaaaggcgctggatgttggagaggaaactacaggatgcagaggttcctgtagaagagcaaaataatattctaaagcatttggagaaaaaggagaccgaatatatgcggttgcagagacataagatgggggttgaagattttgaacttttgacaattattggaagaggtgcatttggcgaggtgcgtctttgtagagagaaggcgtctaagaatgtatatgcaatgaaaaagcttaagaaatctgagatgcttcgtaggggccaggttgagcatgtcaaagctgaaagaaaccttcttgcagaagttgatagtgcttttatagtcaagctctactattcttttcaagatgaagaatacttgtatctcatcatggagtaccttcctggtggtgacatgatgactttgcttatgcgcaaggacacactgacagaagatgaggccagattttacattgcagaaaccgtattagcaatagaatctattcacaagcacagctacattcaccgggatatcaaaccagacaatctattgttagatcgcagtggtcacttgaagctttctgactttggattgtgtaaacctttggatagcagtaattttccaaatttgaatgagccagattatacatctacaaagggcaccaagcctttacctgatagtagcagccggttaagctcttctgctctaaagcgcacacagcaggagcaattgtcgcattggcaaaagaaccgacgaatgctggcatattcaacggttggtactcctgattacattgctccagaggttctgctgaagaaaggatatggaatggaatgtgactggtggtcccttggtgcaattatgtatgaaatgcttgttggttatcctccattctattcggaggatccaatgtcaacctgcagaaagattgtaaactggagaagtcacttgaaattccctgaagaggcaaagctttctcctgaagctaaggatctcatcagcaaacttctatgtaatgttgagcagagacttggaacaaaaggagcccatgagataaaagcacatccatggtttagaggtctcccatgggaaagattgtatcagatgaaagctgctttcataccagaagttaacagcgagttggatactcagaattttgagaaatttgaggagaccggagcacaaattcaaagttcatctaagtcaggtccatggagaaagatgcttccgtccaaggatgcaaactttgttggctatacatataagaattttgaaattgtaaatgatgatgaggttgcaggaattgctgagttgaagaagaagagttccaagtcaaagcggccaactatcaagacattatttgagagcatggatgaagatgagcctgttcaaggaagtttcttaaatatgttgccccataaggaggggcaaccttcatctcactccaccattccaccagaacaataccaacctcgacataaatag</cdnaseq>

Protein Sequence

<aaseq>MDSARSWFQKFQPRDKSKSPAVAASHGKDPGKPPIDDAPSSATK QRVAAAKQYIENHYKTQMKSLQDRKERRWMLERKLQDAEVPVEEQNNILKHLEKKETE YMRLQRHKMGVEDFELLTIIGRGAFGEVRLCREKASKNVYAMKKLKKSEMLRRGQVEH VKAERNLLAEVDSAFIVKLYYSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARF YIAETVLAIESIHKHSYIHRDIKPDNLLLDRSGHLKLSDFGLCKPLDSSNFPNLNEPD YTSTKGTKPLPDSSSRLSSSALKRTQQEQLSHWQKNRRMLAYSTVGTPDYIAPEVLLK KGYGMECDWWSLGAIMYEMLVGYPPFYSEDPMSTCRKIVNWRSHLKFPEEAKLSPEAK DLISKLLCNVEQRLGTKGAHEIKAHPWFRGLPWERLYQMKAAFIPEVNSELDTQNFEK FEETGAQIQSSSKSGPWRKMLPSKDANFVGYTYKNFEIVNDDEVAGIAELKKKSSKSK RPTIKTLFESMDEDEPVQGSFLNMLPHKEGQPSSHSTIPPEQYQPRHK</aaseq>

Gene Sequence

<dnaseqindica>7281..7402#7135..7191#6939..7023#6487..6534#6087..6200#5874..6005#5340..5424#5160..5239#4279..4513#3962..4203#3793..3876#2581..2755#1055..1266#gctgcctgctttgcccacgaaaagacaacccaacccggcgagtcgtagcagagtagagagagaaagaggaggaggaggaaaaaaaataaaattaaggcagttcgttcgttccccacttttgcctgctccaatcgccgccccccgccccgccgcctcgtcgcccgcccgagatccgctccgcgttgcctcccgccgccgccgaggtgagcgcgcgcttccccggacgacgcggctccggccggtggtttcgctgtctgcggtgtgtaaggttttttttgtttgtttggagcgggggtgcagtggaggggactttgggatgagctgcggctgtgtgctcaggggagggaggggtgtgtgtgtgtgtgtgtgtggattgcggcttggtgggattccggtggcgaattggtgactcgtcgctgtggcgcgtggttgtgagctttgggagttggggggttgggggcgtttgtgaggcgatggggggtttctggtgctgcttttcgtgggtggtttctgggggtctcccgggtggaggcaatgtgatttctggatcgaattctgctacttccggtgccggagagttttttttttctctcgagattttgtttcgcttggaaattgagatcttgaggtgttctccctcaatcgtaagcagtgttctagctacccctttcgatgggatatagttcgagctctcaccatggtttaatttcaaacatggagtaggcgtggtttgatttcaagtatggagtaggttcatatatggcggggcaaaacatggcaggaacttgtaacttgtgaatattttatttgaattttcattcagtcgtgtgacagatggcaactgggtgtaacgattctgattgagaatatttatctcctcaaatttcagatagaggcatcgttcccagcattgggttccacggagaattgccaatttggatatctgatccaattgttagttggattgaccgtttcagagtgcctgcagttggctgctggattggtcaatataagaaaaccgttggtttcggagatgatgccattgtgagtggaaatggattccgcgagaagttggttccagaagttccagccgagggacaaatcgaagagtccagcggtggctgccagtcatggaaaggatccaggaaagccaccaattgatgacgcgccatctagtgcaacaaaacagagggttgccgcggcaaaacagtacattgagaatcattacaagacccagatgaagtccctgcaagataggaaagaaaggtaggcgacataattatatttcttgctacttttgcctggttgtatttctcgcaaaaatatatttttggcattttgcgtatatgtaacggaatttgttattaccgttgtactgtaccatacaaagaagagaaattagaccagcaaaggccaccttttgttgttgtttggtagggcacctgacaacacatatcacactttgtaggttgtgatttcaatggtaaatacatttctgggtaattgaacaagattgcgcgtgtgtgtgcatgtgtgcccttgacactgccaaaaaaaggaagcttgattgattgggtagctttcctgactagcgctcgtgttagtaacaaataaatgttgtcctagtagatttgttcagccaaacaaatttaatttagaaaagaaaatatattcatcaatatttaaattagttatttgaaagtgatatgagtttatttgccttatccaaagtgatgcttgatgcgactgaaaggagtatattggttatcttgtagggttacacaagcggcttctttttctcaaaaacgctggacagttgcatttcatttcattaagagagaaacatatatacaaaggaggggccaaaaagccccgcaagtcgcaacaagcccaaaacacatcacaccgaggtgatgctgaacccagaaaaaaaaacccctcctagactacctaggcgttcggcgcaaatatcttagaaagaaactcctgaagcgcacgagccccagttaagcaccataggctactctcatttgacaccgcttgcaaaaccactgtgacattgggagaggcctcattgaacacacaatcattgcgatgcttccaaacctcccaagctactaaaatgatcaaagaattcagccccttccatgaatctttatgaatccctttaatagccttgcaccacccaacttgaaaaactcaattctgaagattgtatctcgcacacgttgtaaaagctgtaactcgcacatgacttttaaatggttcattgaactcacgcaatttgtgtgggtatacccattttggttgctttccccttttcagggtttttgattttgacgccaccgcttttgatttttatgctctaacagtttattttaataatccatgatgagctttttctgctcatactcaatttgaatttcttattgtctttgcgcactattacttctttttgcatcactagaaaatcatatcaacctgctttgttcctattatgggtaattcacttccttttatgcccattcaatggatgacattttgttgccagtcctctctgatgtgttcatttgcttttaggcgctggatgttggagaggaaactacaggatgcagaggttcctgtagaagagcaaaataatattctaaagcatttggagaaaaaggagaccgaatatatgcggttgcagagacataagatgggggttgaagattttgaacttttgacaattattggaagaggtgcatttggcgaggtacttctgatctcaattccatacacaggaccttagcaaatttcttttggagcacaagaacactagatgtgctaagatttctttgtggccttctatttacatcctgttaacagtaggttcagttagaatcatggtcgacttgccattttttgcttatgcaatgtctgtagtataaatttggatctcttttatgcttagaaaaatgtgctgccttgctgctcctttttgcatgatgccatttaacatggaagtgttctgactgaaaaaaaatggggaaaatgggagtttttttaattgtttgaaaaagggctgctttcatgaaaaagggaaaatgtgagtttttttagtttatttgttatatctggtttcctgatgggtcacactttggtcccctgtaatgatggcattcaattcgtcaagtggtcctaggccattcatttgtcttctgaattctaatcattctcccgatacatattgtaaaaggaaaataaaaggaaggaagtcaaggaactctgattttcccagcttatgttctgcttaaggacctaatatagtataccactttatcataggctcaagtctacatgtaatccctcctttcttgtgtattcgagagaaaagaaacatgtaatccctcctcaagtctagatgaaacctggtctagacttttatgccctgcctcgtcaatcttcagtgtcttccacataaatttatttgagtgagaaatagggtcatgtctttttatgcctataatctaccattaaacttaagacaaataaaaaaggcatgtgcttagtgtccaacaagactttgtatttattatttttattccagatttaaccctttttaaatagaagattcttatgtttcttccttttcaacaagagaatagtataaatatgtctatttgcttagtgtggtagatctatgcagttctgaaactactatatctaatcgtcatcaattatatgtacttacttttgaggccatttaaatgtgcatcgctcttgatgtcactgtaaattgtaattatgcaggtgcgtctttgtagagagaaggcgtctaagaatgtatatgcaatgaaaaagcttaagaaatctgagatgcttcgtaggggccaggtaccatgtatggtctggctgcattattttgtagtttctatttctgatttacacgtatgctttgacatggttgtacaaatttcaggttgagcatgtcaaagctgaaagaaaccttcttgcagaagttgatagtgcttttatagtcaagctctactattcttttcaagatgaagaatacttgtatctcatcatggagtaccttcctggtggtgacatgatgactttgcttatgcgcaaggacacactgacagaagatgaggccagattttacattgcagaaaccgtattagcaatagaatctattcacaagcacagctacattcaccggtatcaaataagtgttcccaagttttggtaagaaatttgatgattccaaagataaccttggtgtttttttttcagggatatcaaaccagacaatctattgttagatcgcagtggtcacttgaagctttctgactttggattgtgtaaacctttggatagcagtaattttccaaatttgaatgagccagattatacatctacaaagggcaccaagcctttacctgatagtagcagccggttaagctcttctgctctaaagcgcacacagcaggagcaattgtcgcattggcaaaagaaccgacgaatgctggtaagtagcatatctgaaactgaatcaactaattgatatttgatagaaccttgccaatgttgtgatgcctgatgccacatgcccacatcaagttgatgcatttaatagtttttatagtaaattcacactagttgtgagcttttgtttgaacatctgggctaataatactttggtcttttacctggcataaaaccacatgaaaattattttgctacgatggattttcaagattcatttgtgcttcctcaagacaaggtttttagagtcggtgaacattgaatatttctgaataaagaatatttgcgtgcagaagcataaatgatgctattcctggacagacttaattcaggcatttgtgtacaatgtgcagtgttacagtgcacgattccaaggaaataaaaaatttcatgctctaagcttcaaagttttagtggattgtgtaaatcatgcattatttagctgttgatgaaacttggtatttattatatgaaaaatcatttaacgtttatcttgaatttttcacattttgctctctgactacgttttgccacgttggcaagtgaatatgtacatgagtctagttttctaggctctcatcaatatatggtagtatgcttagttatactcttttttttttggcatgcaggcatattcaacggttggtactcctgattacattgctccagaggttctgctgaagaaaggatatggaatggaatgtgactggttagtctcttatcttgtaattgtccataattgttaagtcatgttatttttcctcatccatgtgcttcgttcttgttctcacattttattttgatcttaggtggtcccttggtgcaattatgtatgaaatgcttgttggttatcctccattctattcggaggatccaatgtcaacctgcagaaaggcatgtactttgcccacagttttttttaatttgttatctagagggtaattgtttggaattttctatattcagtctaagcaaacctcacccaacttgcaagaagacaaccttatgccaaattttatcgcacaatcaacacagcagaatgcagtatttgccatagtaatgtactagtgacctgcatgtaatcaaattattatgtgggtcagtggctagatgatgatggtagcaactggtcctcggagctcagcctatacagtttgtggactccaataatcacgcatgaccttggtttttccttatgaagtgccctatagtgggaaaattttgtggaaggctgtatttcccaatgctttcagctaagcttgtttactccagtacaggaaatactcatgtagcttcatgagcatgtgtttcatccaattttattttctattcttcatttgcagattgtaaactggagaagtcacttgaaattccctgaagaggcaaagctttctcctgaagctaaggatctcatcagcaaacttctatgtaatgttgagcagagacttggaacaaaaggagcccatgagataaaagtgcgctctcttctatatgtacaatatctttattgctctcaactgtgtgcttaattattatcgtcatatgctctactttaggcacatccatggtttagaggtctcccatgggaaagattgtatcagatgaaagctgctttcataccagaagttaacagcgagttggatactcagaattttgagaaatttgaggaggtaaatttcagtcgttttcccattggtctgattcatgtgataatttgaggagggatttcgtttcaccttgttttattaggttgtgatcttaaaccttgctgcatttagcattatgattttctaatatgcatgacaacttagccacgttttacatcgtctccatggtaacatgtttatttctggtcttttgagagtgaaacctaaaactacgagtatgctattttggtaaactgtatagaaagctgaagttatgacacctgtacttacctttcttactattttgcagaccggagcacaaattcaaagttcatctaagtcaggtccatggagaaaggtatgtgtgacttcaccatgaaatgctaattactgagtagttggaaacacattcctaataatgaagctgcatatgtgttggtcaaacaactgttatatcatatatactttacggcagcacgtgtgtcgcctgtgcgactctattttctgctatctgtagaatgtagatagggaacatacatagcttgactagtgatggaccatgggcatgaagcttgtgattcactgctagctagtctgtagccataaaaatatataaaaaactagtatgtattaggaacatttccaaaatttccaactattgcttttaggaggcagaaattaacatgcttaattagagatgtttcattttcgtattgcctcttagccaatgaactaaaacgaagagcactgctatttttgcagatgcttccgtccaaggatgcaaactttgttggctatacatataagaattttgaaattgtaaatgatgatgaggttgcaggaattggttagcactctctctctctctctaatgaaattgtaaatgatgatgcctttctttagattatgcatttttagtgtcttttgtttgaaaaaaaatgttgtgcttatggaacagctgagttgaagaagaagagttccaagtcaaagcggccaactatcaagacattatttggtattgagcactattattacctattggttccttatacaccatgtaccgtttttcatgatatgtttaacttgcttttatccttaaaacagagagcatggatgaagatgagcctgttcaaggaagtttcttaaatatgttgccccataaggaggggcaaccttcatctcactccaccattccaccagaacaataccaacctcgacataaataggataaggaggttttcaaaagtaaaacacagataattaaaacaagaaaaaaattggttccttttgatcttgtttcccgtccaagctttgtaaattctaaccgatgctttctcttctcaaattcttcatacaaaaatccctcctctgtccaaagagtggtgtttgctgtacgcggcgatgtttgtttggttcgccgtgtgtttgggttacagcttcggtgatgatgggtctcaggttacagctagtgtatacttgctaccatttctgacgggcatgtgtattgcaattaaattcacccctcttttgttctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0511400, RefSeq:Os05g0511400