Os05g0511500

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Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0511500| Description = Similar to Lipoic acid synthase-like protein| Version = NM_001062551.1 GI:115464832 GeneID:4339289| Length = 2444 bp...")
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Gene Name

Os05g0511500

Description

Similar to Lipoic acid synthase-like protein

Version

NM_001062551.1 GI:115464832 GeneID:4339289

Length

2444 bp

Definition

Oryza sativa Japonica Group Os05g0511500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25405035..25407478

Sequence Coding Region

25405060..25405413,25405557..25405738,25405831..25405921,25405999..25406156,25406469..25406640
,25406737..25406847,25407111..25407197

Expression

GEO Profiles:Os05g0511500

Genome Context

<gbrowseImage1> name=NC_008398:25405035..25407478 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25405035..25407478 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcctactgctctagggtttaccaccaccacccggtctcgccttccacaatgcagggatcgctcgcgaggccttcgatccacgcgggatccgcaagcctgaccttccgtgctcggcccaattccgtgtccatcgtgcgatgcgacgcggactcgccgccggagggaagtgctgtggcgggatgggcgcctccggggccgtacacggggagggacccggcggcgaggaagccggcgtggctgagacagcgtgcggcgcagggggagaagtacgcgaggctgagggagtcgctcggggagctcaagctcaacaccgtctgcgtcgaggcccaatgccccaacatcggtgagtgttgggatggcggcggcggtgcaggtggggacggggacggcattgcgacggcgacgatcatgctcctcggcgacacttgtacccgtggttgtcgattctgtgccgtgaaaaccagtaacaagcctccgccgcccgatgccctggagcctctcaggacagcagtggcagttgcaagttggggcgtagactatgttgtgctgacaagtgttgatagagatgaccttcctgatggtggaagtggccattttgcgcaaacagtgaaggctctaaaggaattgaaacctggtatactggtggagtgtctaacttcagactttcgaggtgacctggaggcagtttcatccttggcaagctctggtttggatgtgtttgcacacaacattgaaactgtgaggagtctgcagagaatagtcagagatccccgagcagcatacgatcagagtttagctgttctgaaacatgcgaaaaattgcaaagatggtatggtaacgaagtcctctatcatgcttggtctaggtgagacagatgaagaggtgaagcaaaccatgtgtgatttgagggccattgacgttgatattctgaccttgggacaatatttacagccaacagaaagacacttgcgggtcagagaatatgtgactcctgagaagtttgatttctggaaggagtatggggaatctctgggttttctttatgttgctagtggacctctggttcggtcttcgtatcgtgcgggagagctctttgtgcaaaatttggtcagacgtaaaaaagccgagcttgcacctactttgcagtaa</cdnaseq>

Protein Sequence

<aaseq>MAAYCSRVYHHHPVSPSTMQGSLARPSIHAGSASLTFRARPNSV SIVRCDADSPPEGSAVAGWAPPGPYTGRDPAARKPAWLRQRAAQGEKYARLRESLGEL KLNTVCVEAQCPNIGECWDGGGGAGGDGDGIATATIMLLGDTCTRGCRFCAVKTSNKP PPPDALEPLRTAVAVASWGVDYVVLTSVDRDDLPDGGSGHFAQTVKALKELKPGILVE CLTSDFRGDLEAVSSLASSGLDVFAHNIETVRSLQRIVRDPRAAYDQSLAVLKHAKNC KDGMVTKSSIMLGLGETDEEVKQTMCDLRAIDVDILTLGQYLQPTERHLRVREYVTPE KFDFWKEYGESLGFLYVASGPLVRSSYRAGELFVQNLVRRKKAELAPTLQ</aaseq>

Gene Sequence

<dnaseqindica>26..379#523..704#797..887#965..1122#1435..1606#1703..1813#2077..2163#gcggcctacactgcgcagcgcagcaatggcggcctactgctctagggtttaccaccaccacccggtctcgccttccacaatgcagggatcgctcgcgaggccttcgatccacgcgggatccgcaagcctgaccttccgtgctcggcccaattccgtgtccatcgtgcgatgcgacgcggactcgccgccggagggaagtgctgtggcgggatgggcgcctccggggccgtacacggggagggacccggcggcgaggaagccggcgtggctgagacagcgtgcggcgcagggggagaagtacgcgaggctgagggagtcgctcggggagctcaagctcaacaccgtctgcgtcgaggcccaatgccccaacatcggtgaggtaaaatagaatcaaacatgtaaaaatcttaaatccaaatgcattatttttttttgcggggaaaatccaaatgcattgtggtgtgacaaagttgtaactctctttttttgggtttgattttgcgatattgtggtatatttcagtgttgggatggcggcggcggtgcaggtggggacggggacggcattgcgacggcgacgatcatgctcctcggcgacacttgtacccgtggttgtcgattctgtgccgtgaaaaccagtaacaagcctccgccgcccgatgccctggagcctctcaggacagcagtggcagttgcaagttgggggtacgatccaccgacgattattgcattattggcatgttgagatgataatgcaaaagactttagaaccgatgcttctttttttttttttgcagcgtagactatgttgtgctgacaagtgttgatagagatgaccttcctgatggtggaagtggccattttgcgcaaacagtgaaggctctaaaggtttgtcggtcgccattcagttgtgccactaaattggtggttgtactgtactgaagaaacttttagcttatcttcaggaattgaaacctggtatactggtggagtgtctaacttcagactttcgaggtgacctggaggcagtttcatccttggcaagctctggtttggatgtgtttgcacacaacattgaaactgtgaggagtctgcagagaatagtcagagatccccgagcagcgtaattctctctgtgtttttcattacagccacaaaacactgtatggttgcctagatgttaaatctgaagtacttcgtcattaatacgccctccagagctcatgacacccatacagaggtcctgaggtccaggattgtcttaggcagttaggctatccaataataatgactgttaacctaccacatctaattttgaaaactgaggttgagggataatccttgaagaaactatgtaaaatctctaatgtcatcatattgactcttggcaatgtagttattatcttatttccagtttattatctcgtttccacagatacgatcagagtttagctgttctgaaacatgcgaaaaattgcaaagatggtatggtaacgaagtcctctatcatgcttggtctaggtgagacagatgaagaggtgaagcaaaccatgtgtgatttgagggccattgacgttgatattctgaccttgggacaatatttacaggtttgatctttgagcaactttgccagcgctttttatatcctcctggacttcctttgttcttgttgttgtatcatccaatgctccttgcttatacagccaacagaaagacacttgcgggtcagagaatatgtgactcctgagaagtttgatttctggaaggagtatggggaatctctgggttttctttatgttgctagtggacctctggtaagcttcacataaagtctgctattcttatagataaaatctaataatatgagcaacagtatttaaagaaaatgataactctactaatggcccttgttttgaaaggaatattgctaccgtcgtatttgaaccatctagatcatgtatttcctggttatccagacaatcttcaaaagagaaaaggcccttctcttttgttggttgttaacttggtagtagaattttatgcatatttatccttgctactgttgatgacttctcaggttcggtcttcgtatcgtgcgggagagctctttgtgcaaaatttggtcagacgtaaaaaagccgagcttgcacctactttgcagtaaccaaataggagtattactactatacatctgatggcctggtgcagttctttgatgaaagttttgcattgaagttgtgtgctgatgacaggagtaaggaggtggcacaatcgggaccaaaggcctagagtgacatgcctataggcgctcgttgttctagccatgctgtgatatctgctgtagcctgtaaaaaaaattgtttttcactttcttactcgggctgtcaaaaaagtgtatggaaaccagataaaataataccgaatgctaaaattcatgttactgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0511500, RefSeq:Os05g0511500