Os05g0512000
| Gene Name |
Os05g0512000 |
|---|---|
| Description |
Zinc finger, RING-type domain containing protein |
| Version |
NM_001062554.1 GI:115464838 GeneID:4339293 |
| Length |
5509 bp |
| Definition |
Oryza sativa Japonica Group Os05g0512000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:25418488..25423996 |
| Sequence Coding Region |
25418640..25418978,25419357..25419475,25419571..25419736,25419836..25419944,25420037..25420137 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:25418488..25423996 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:25418488..25423996 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggacacggggagcctggagaagatggggcgagagctcaagtgccccatctgcctgagccttctcagttcggcggtatccatctcctgcaaccacgtcttctgcaatgattgcctcacggaatcgatgaaatccacgtcgagctgccccgtgtgcaaggtcccgttccgacgacgagaaatgcgaccagcacctcacatggacaatctggtcagcattttcaaaagcatggaggctgcagcaggtaccaatgttgtctcaacacaggaggctcctgtggtaaaacttgcagatggatcagattgtgtcaacagcgggaaaaattccaaaaggtcacaaaaatcattgacacgaaaaaggaaggtaacatccgagatggaaaaaaatacagcaaaggatgctacagcttctgcatcccaacctactacaaagccttccttctctactaacaaaagaatacaagtgaaaccattccctgaatctgagacaccaataagagctgagaagattatgaagcctgaagagccaaaaaataatctgaataatgatgttgaaggaaagaataaagcagtggcatcgggtcaacctggaagtccttcattgtcaccctttttttggctaagggaacaagaagaacaagaaggctgtaccgctgagacgttaagtgaaacgcaatctttagacacacccttgcgtcataatgcaccctcttttagcgatattaaagattctgatgacgaaatccctttaaatacaactccaaatagcaaagctgcggctacagaactctttgacagtgaaatatttgaatggacccagagaccatgctctcctgaattgtattccactccattgaaaaagcagagtaaagctaagagtaaactagatcaaattgaagagaagggtgatgaagaagatgtgcatattggtggttcatttgataagctgggtaatgcaagtaatgcagctcagcttgtcaatacaaaagcaacaaagcagaagagaaagaaaacaagtcccagtaacaaaaacagtgcaaaattgtccaatcgtgctgagccctgcataaaaaagtctgatgccaatcaacaaggttcaaatagacgtaaaagtgctgccctaaaatcttgtcagaaaagcagcagtgctgtagggaggaatacttcaggtagaagaaacaaggcctctagcaacagcaagccaattcatggctctagtgataactccccagagtcatatcttcctaaggagggtttggatgttgaagcacctgacaaacccctttctgaaaggatccaaaacttggagaaaactagtcgacgaaagggaagtgcaaggaagctggaaatggcagggaaaactatttcagatactacagagaagaatagtgagccaagaagtaagagagtcagaagaatgtctgaccacgctatagctaaaccggttgaagttccttcaggatctggaaatgaaacagaaataccacagcttcacaccctcacaaaaggcagcattcaacgcaaatcctccaacgctagaagacatagcaaagtttgtggagaacaggaaggtaagaataaacttgagaacacgacaatgacacctattattttacatgggaaatgccaaaataaagaggcagtatgtacagctccttcagtaaggactgcatctgttaagtacaagcaagcaaaatttagcgaacaaccagattgttttggaacggagaactttggaaaccttcaagcatgccctgcacgtaatgttttactgaagaagtgtgaggtatctactttgaaggtttcctgtgctttctgccagaccgatgtcatcacagaggagtctggagagatggttcattatcaaaatgggaaacaagtccctgcagagttcaatggaggagccaatgtggtgcactctcacaagaactgccttgagtgggctcctgatgtctacttcgaagatgattctgcctttaatcttacaactgaattggcgagaagcagacggatcaaatgtgcttgctgtggaattaaaggagctgcacttggatgctttgagatgagttgtcggagaagtttccacttcacctgtgctaaactaatcccagaatgcagatgggataatgaaaattttgtgatgttatgccctctacatcggtctacaaagttacccaatgaaaattctgaacagcaaaagcaacctaaaaggaaaacaacactcaaagggtcatctcaaataggatccaatcaagattgtggtaataactggaaatggccatctggatcaccacagaagtgggttctctgctgctcatcactttctagttctgagaaggaacttgtatcagaatttgcaaagttagctggcgtgcctatttcggcaacttggagtccaaatgttacccatgttattgcatcaactgatctctctggtgcttgcaaacggacgctgaagtttctcatggcaatcttgaatggcagatggattgtctccatagattgggttaaaacttgcatggagtgcatggaaccaattgatgagcacaaatttgaagtcgctactgatgttcatgggatcactgatggtcctaggttaggaagatgcagggttattgacaggcaacctaagctgttcgacagcatgaggttctacctccatggggactacacaaaatcctacagaggctacctgcaagatctcgtggttgcagcaggtggaatagttcttcagaggaagcccgtatcaagagaccagcaaaagcttcttgatgacagctctgacctcctcatcgtttacagcttcgagaatcaagatagggcaaaatccaaggccgaaaccaaggctgctgatcgcaggcaggctgatgctcaggctcttgcttgcgcttctggaggcagagttgtgagcagtgcatgggtgattgactcaattgcagcctgcaatctgcaacctctttga</cdnaseq> |
| Protein Sequence |
<aaseq>MADTGSLEKMGRELKCPICLSLLSSAVSISCNHVFCNDCLTESM KSTSSCPVCKVPFRRREMRPAPHMDNLVSIFKSMEAAAGTNVVSTQEAPVVKLADGSD CVNSGKNSKRSQKSLTRKRKVTSEMEKNTAKDATASASQPTTKPSFSTNKRIQVKPFP ESETPIRAEKIMKPEEPKNNLNNDVEGKNKAVASGQPGSPSLSPFFWLREQEEQEGCT AETLSETQSLDTPLRHNAPSFSDIKDSDDEIPLNTTPNSKAAATELFDSEIFEWTQRP CSPELYSTPLKKQSKAKSKLDQIEEKGDEEDVHIGGSFDKLGNASNAAQLVNTKATKQ KRKKTSPSNKNSAKLSNRAEPCIKKSDANQQGSNRRKSAALKSCQKSSSAVGRNTSGR RNKASSNSKPIHGSSDNSPESYLPKEGLDVEAPDKPLSERIQNLEKTSRRKGSARKLE MAGKTISDTTEKNSEPRSKRVRRMSDHAIAKPVEVPSGSGNETEIPQLHTLTKGSIQR KSSNARRHSKVCGEQEGKNKLENTTMTPIILHGKCQNKEAVCTAPSVRTASVKYKQAK FSEQPDCFGTENFGNLQACPARNVLLKKCEVSTLKVSCAFCQTDVITEESGEMVHYQN GKQVPAEFNGGANVVHSHKNCLEWAPDVYFEDDSAFNLTTELARSRRIKCACCGIKGA ALGCFEMSCRRSFHFTCAKLIPECRWDNENFVMLCPLHRSTKLPNENSEQQKQPKRKT TLKGSSQIGSNQDCGNNWKWPSGSPQKWVLCCSSLSSSEKELVSEFAKLAGVPISATW SPNVTHVIASTDLSGACKRTLKFLMAILNGRWIVSIDWVKTCMECMEPIDEHKFEVAT DVHGITDGPRLGRCRVIDRQPKLFDSMRFYLHGDYTKSYRGYLQDLVVAAGGIVLQRK PVSRDQQKLLDDSSDLLIVYSFENQDRAKSKAETKAADRRQADAQALACASGGRVVSS AWVIDSIAACNLQPL</aaseq> |
| Gene Sequence |
<dnaseqindica>5019..5357#4522..4640#4261..4426#4053..4161#3860..3960#3545..3731#3350..3450#2256..3230#2027..2125#1478..1950#1030..1143#550..620#382..435#73..128#gcaatcattcctcccaaatctgaaatcttgcaaggactccacgcccgagagggagaaatcgagggatcggcaatggcggacacggggagcctggagaagatggggcgagagctcaagtgccccatctggtgaatgtttgattccccgctcgatcgattcgatttccttttttgcgcttcgtctttggattcgcgttctaggacgatttttggttcttgggttcatctctcttttttctcggccatcttgttttctcctgatgttttgttggttgattctctccgtggtcctgaaactatttctcacgggcgattttcttttcgttcgtgtggcttgcgatttgttgtgctttgtattgattagaaatcttgttcttggcagcctgagccttctcagttcggcggtatccatctcctgcaaccacgtcttctgcaagtaagtcttcatctctcactattccgcctcgtcgtaatgcagttaaaattcacagcgtcctggatggtcttctccatttcgggcttatatgctgaaattttccccattctgcagtgattgcctcacggaatcgatgaaatccacgtcgagctgccccgtgtgcaaggtcccgttccgacgacgaggttagtgttgtgctcttgctgaattgtgtctacttaatcacgtgataggcatgaaaaacacacgaattaaactaactgcctaggtttagtgtcactcatggatcggacattgaactattagagtttcttatgtactccaaattcgtagtaatagaatatgtcacgtccggtcctagattcgttttttatgggactgaaggagtagtgcttatcggactgccggtgataaatttgcttttcgctgagcatgggcagcacacctcattcagcaatatttcaaaatttgatatgaagtactgtatttgatgaacttgacctttagtggaaacttggatatgataccttaatggcttcagcttgatatctacaaggtccaaaactgacactcaagggcttggtttgcttgcagaaatgcgaccagcacctcacatggacaatctggtcagcattttcaaaagcatggaggctgcagcaggtaccaatgttgtctcaacacaggaggctcctgtggtaaaacttgcaggtaattgtgttgtagcatgttcttattctattttctagcatatgtgcaaagtagcaacctcattgattgatttagttaaagtgatttttttgtaactccttttttgtactacactgttcaattcagttacaatgtttgttttgcatctcttctgtgctacattgtcaacataagttaacagtgattgttctgtgcttctttgtctgtaccccattattgaattcatttcaacataatgcttgctggataattggctctctatgaaaaaaaatctatgcttagagaagatggatagttgtcaatctttagctcactatcttgttcatgtttgaagatggatcagattgtgtcaacagcgggaaaaattccaaaaggtcacaaaaatcattgacacgaaaaaggaaggtaacatccgagatggaaaaaaatacagcaaaggatgctacagcttctgcatcccaacctactacaaagccttccttctctactaacaaaagaatacaagtgaaaccattccctgaatctgagacaccaataagagctgagaagattatgaagcctgaagagccaaaaaataatctgaataatgatgttgaaggaaagaataaagcagtggcatcgggtcaacctggaagtccttcattgtcaccctttttttggctaagggaacaagaagaacaagaaggctgtaccgctgagacgttaagtgaaacgcaatctttagacacacccttgcgtcataatgcaccctcttttagcgatattaaagattctgatgacgaaatccctttaaatacaactccaaatgtaagttcttctgaccacctctaccgttctttttgaatttttcttttggcttctcattttgctacatgagtttcagagcaaagctgcggctacagaactctttgacagtgaaatatttgaatggacccagagaccatgctctcctgaattgtattccactccattgaaaaagcaggtattttgctaagtgcctaagtggatcaagaggcactatacttttctcacttttttcctcttttatgacctgttgattttcatttattttgcatttaatatttgatgactcagctattttgtctgttcagagtaaagctaagagtaaactagatcaaattgaagagaagggtgatgaagaagatgtgcatattggtggttcatttgataagctgggtaatgcaagtaatgcagctcagcttgtcaatacaaaagcaacaaagcagaagagaaagaaaacaagtcccagtaacaaaaacagtgcaaaattgtccaatcgtgctgagccctgcataaaaaagtctgatgccaatcaacaaggttcaaatagacgtaaaagtgctgccctaaaatcttgtcagaaaagcagcagtgctgtagggaggaatacttcaggtagaagaaacaaggcctctagcaacagcaagccaattcatggctctagtgataactccccagagtcatatcttcctaaggagggtttggatgttgaagcacctgacaaacccctttctgaaaggatccaaaacttggagaaaactagtcgacgaaagggaagtgcaaggaagctggaaatggcagggaaaactatttcagatactacagagaagaatagtgagccaagaagtaagagagtcagaagaatgtctgaccacgctatagctaaaccggttgaagttccttcaggatctggaaatgaaacagaaataccacagcttcacaccctcacaaaaggcagcattcaacgcaaatcctccaacgctagaagacatagcaaagtttgtggagaacaggaaggtaagaataaacttgagaacacgacaatgacacctattattttacatgggaaatgccaaaataaagaggcagtatgtacagctccttcagtaaggactgcatctgttaagtacaagcaagcaaaatttagcgaacaaccagattgttttggaacggagaactttggaaaccttcaagcatgccctgcacgtaatgttttactgaagaagtgtgaggtatctactttgaaggtttcctgtgctttctgccagaccgatgtcatcacagaggtatcttctgacttctgccgtgtttatatgcaaatgtccttttctccaaatctaacatattccctgctaatgaacatactcctagaagataaccaaatctccctccttttctcttttaggagtctggagagatggttcattatcaaaatgggaaacaagtccctgcagagttcaatggaggagccaatgtggtgcactctcacaagaactgccttgagtggtttgttatcctttctagtgcaagataatatcagaaaaaaaaaagatttcagtatgcaatattaatctgaatattttttattattttcttgaagggctcctgatgtctacttcgaagatgattctgcctttaatcttacaactgaattggcgagaagcagacggatcaaatgtgcttgctgtggaattaaaggagctgcacttggatgctttgagatgagttgtcggagaagtttccacttcacctgtgctaaactaatcccagaatgcagatgggataatgtaagtccatatggtgttctttatatatattttgaggcagtggtttcaactataccagaatcatttctgaacgtttgacagccataaatctgtaccttattgttttgtttcaattttttcattggcaggaaaattttgtgatgttatgccctctacatcggtctacaaagttacccaatgaaaattctgaacagcaaaagcaacctaaaaggaaaacaacactcaaagggtatcttttgaacctgttgtttgaaacatgtttcttaatggttgaacattgacatgtacgagcacttactgtagaataaccggcttttccaggtcatctcaaataggatccaatcaagattgtggtaataactggaaatggccatctggatcaccacagaagtgggttctctgctgctcatcactttctagttctgagaaggtgctttcgaaaattagtcttattttcctgaccctgatcgaattaatggcatttccttcatatgcattacaactgaaacaaaatgaataaattactcaggaacttgtatcagaatttgcaaagttagctggcgtgcctatttcggcaacttggagtccaaatgttacccatgttattgcatcaactgatctctctggtgcttgcaaacggacgctgaagtttctcatggcaatcttgaatggcagatggattgtctccatagattgtaaggccatgtgctactaatataactgtgctgaacagcctatattcatattgatctggtgccccttgttgctaactgacaactttgtgtcataggggttaaaacttgcatggagtgcatggaaccaattgatgagcacaaatttgaagtcgctactgatgttcatgggatcactgatggtcctaggttaggaagatgcagggttattgacagggtaaacatttcttgccattgttatgtacctcattttcttgcaaggatcactaaaaaaatcttttgatagaacaaaattggtgttaacctgaaaacagtgccaaatctacttgtccgttggaacaattttagcttgatataaaagaggacaagcagaaagtaccaccaacatgatatgttgctatgaattaaaagaaacaggccgtaatacttcatgcagccctgcacttatgcatgccatagaataaattcatagacctggtgttgacaattccacacatttggaattttggatgtgttctaacttctaagcaatctcacgtgggtattttttacgcctaacaatcacattgttttttgttcttttttacccttgcagcaacctaagctgttcgacagcatgaggttctacctccatggggactacacaaaatcctacagaggctacctgcaagatctcgtggttgcagcaggtggaatagttcttcagaggaagcccgtatcaagagaccagcaaaagcttcttgatgacagctctgacctcctcatcgtttacagcttcgagaatcaagatagggcaaaatccaaggccgaaaccaaggctgctgatcgcaggcaggctgatgctcaggctcttgcttgcgcttctggaggcagagttgtgagcagtgcatgggtgattgactcaattgcagcctgcaatctgcaacctctttgaatctagaagactgcctggtgccaaaatgcgagttcgatagagtaagaaacaagatagaaatctaagatgcacagggctttgtaatgagacttaaattatttgaaaataagtttactatgcgttgcaaaagaaactagactgcatttctatgg</dnaseqindica> 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| External Link(s) |
