Os10g0470900

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Annotated Information

Function

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Expression

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Evolution

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References

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Structured Information

Gene Name

Os10g0470900

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001071359.1 GI:115482461 GeneID:4348867

Length

5333 bp

Definition

Oryza sativa Japonica Group Os10g0470900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17888477..17893809

Sequence Coding Region

17888606..17888827,17888905..17890077

Expression

GEO Profiles:Os10g0470900

Genome Context

<gbrowseImage1> name=NC_008403:17888477..17893809 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17888477..17893809 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcggatcaggggaagctgttcatcggcggcatctcgtgggagaccaccgaggagaagctccgcgaccacttcgccgcctacggcgacgtctcccaggccgccgtcatgcgcgacaagctcaccggccgcccccgcggcttcggcttcgtcgtcttctccgacccttcctccgtcgacgccgccctcgtcgacccccacaccctcgacggccgcacggttgatgtgaagcgggcgctctcgcgggaggagcagcaggccgcgaaggcggcgaaccctagcgcgggggggaggcacgcctccggtgggggcggtggtgggggaggcgccggtggtggtggtggtggcggcggtggtgacgccggcggtgcgcggacgaagaagatcttcgtcggcgggctgccctccaacctgacggaggacgagttccggcagtacttccagacctacggggtcgtcaccgacgtcgtcgtcatgtacgaccagaacacgcagcggccgagggggttcgggttcatcaccttcgacgcggaggacgccgttgaccgcgtgctgcacaagaccttccatgacctgagcgggaagatggtggaggtgaagcgcgccctgcccagggaggccaaccctggctccggcagtggtggccgttccatgggaggcggcggtgggggttaccagagtaacaatgggccgaactccaattctgggggctatgatagcagaggtgacgctagcaggtatggtcaggcgcagcagggtagtggtggttatcccggttatggtgctggaggatatggtgctggtacggttggttatggatatgggcatgctaaccctggaactgcgtatgggaattatggggctggaggatttggaggtgttcctgctgggtatggtgggcattatggcaatccaaatgcgcctggttcaggttaccagggtggtcctccaggagcaaacagaggaccatggggtggtcaagctccgtctggttatggcactgggagttatggtggcaatgcaggctatgctgcttggaacaactcttctgctggaggtaatgcacccactagtcaggccgctggtgcaggcacaggctatgggagccagggctatggatatggtggatatggaggagatgcatcgtatggtaatcatggtggatatgggggttatggaggaaggggagatggtgctggcaatccagctgctggcggtggatctgggtatggtgctggctatggaagcgggaatggcggttctggttatccaaatgcttgggctgatccttcacaaggtggagggtttggggcttcagtcaatggagtgtctgaaggccaatcaaattatggcagtggttatggtggtgtgcaacctagggttgctcagtaa</cdnaseq>

Protein Sequence

<aaseq>MESDQGKLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTG RPRGFGFVVFSDPSSVDAALVDPHTLDGRTVDVKRALSREEQQAAKAANPSAGGRHAS GGGGGGGGAGGGGGGGGGDAGGARTKKIFVGGLPSNLTEDEFRQYFQTYGVVTDVVVM YDQNTQRPRGFGFITFDAEDAVDRVLHKTFHDLSGKMVEVKRALPREANPGSGSGGRS MGGGGGGYQSNNGPNSNSGGYDSRGDASRYGQAQQGSGGYPGYGAGGYGAGTVGYGYG HANPGTAYGNYGAGGFGGVPAGYGGHYGNPNAPGSGYQGGPPGANRGPWGGQAPSGYG TGSYGGNAGYAAWNNSSAGGNAPTSQAAGAGTGYGSQGYGYGGYGGDASYGNHGGYGG YGGRGDGAGNPAAGGGSGYGAGYGSGNGGSGYPNAWADPSQGGGFGASVNGVSEGQSN YGSGYGGVQPRVAQ</aaseq>

Gene Sequence

<dnaseqindica>130..351#429..1601#ctcccctccccgacgccgaaatcccccaaattccacccccgcctcctcctcctcctcgcgtcgcgagagaatccgaggcgcgcgagcgagaggaaggagagaaggtgagagcagcggcggagggaggagatggagtcggatcaggggaagctgttcatcggcggcatctcgtgggagaccaccgaggagaagctccgcgaccacttcgccgcctacggcgacgtctcccaggccgccgtcatgcgcgacaagctcaccggccgcccccgcggcttcggcttcgtcgtcttctccgacccttcctccgtcgacgccgccctcgtcgacccccacaccctcgacggccgcacggtatcccctctcaaaccctagcgaatattcgcgttggattccctcctctcaaggttcggttcggttcggtttcgtaggttgatgtgaagcgggcgctctcgcgggaggagcagcaggccgcgaaggcggcgaaccctagcgcgggggggaggcacgcctccggtgggggcggtggtgggggaggcgccggtggtggtggtggtggcggcggtggtgacgccggcggtgcgcggacgaagaagatcttcgtcggcgggctgccctccaacctgacggaggacgagttccggcagtacttccagacctacggggtcgtcaccgacgtcgtcgtcatgtacgaccagaacacgcagcggccgagggggttcgggttcatcaccttcgacgcggaggacgccgttgaccgcgtgctgcacaagaccttccatgacctgagcgggaagatggtggaggtgaagcgcgccctgcccagggaggccaaccctggctccggcagtggtggccgttccatgggaggcggcggtgggggttaccagagtaacaatgggccgaactccaattctgggggctatgatagcagaggtgacgctagcaggtatggtcaggcgcagcagggtagtggtggttatcccggttatggtgctggaggatatggtgctggtacggttggttatggatatgggcatgctaaccctggaactgcgtatgggaattatggggctggaggatttggaggtgttcctgctgggtatggtgggcattatggcaatccaaatgcgcctggttcaggttaccagggtggtcctccaggagcaaacagaggaccatggggtggtcaagctccgtctggttatggcactgggagttatggtggcaatgcaggctatgctgcttggaacaactcttctgctggaggtaatgcacccactagtcaggccgctggtgcaggcacaggctatgggagccagggctatggatatggtggatatggaggagatgcatcgtatggtaatcatggtggatatgggggttatggaggaaggggagatggtgctggcaatccagctgctggcggtggatctgggtatggtgctggctatggaagcgggaatggcggttctggttatccaaatgcttgggctgatccttcacaaggtggagggtttggggcttcagtcaatggagtgtctgaaggccaatcaaattatggcagtggttatggtggtgtgcaacctagggttgctcagtaaatgaggccattagagcatctatgagatgaaccagcaaaattgggcagtctatgtatgttgtgttaccctggcccctctgattgcttttggcctcttgaagatctcccatttgctggttaaatcagtatttctccgggttggaatgcttgaaccttttgcggcttactactagaatgtagtcaataactagcttctagctatactatggagtagctgtatcttgcgtaatgctttatttaagtttagccttatctgtcggtgtgctttgtcatgagtggaatttcagttgcttcgtctctagtttaaagctagagtagcttcactacttatggacaacaaactatctagttgtacctttattctacagaatcatatgtttgtggttgacagtagtatttatgctggattgtgctttacctgaatctgaaatgttctatctttggttgtttctctgtggtgtgctctagctcaccttgcagttaaggtgctgttgcgtattattccattaatattgattgtaacagatgacaatcctcaaacttctatgcagtgatagaggtgttttatactgtagctgcttctagcagtaagttcaggtgtagtgcaagtgcttttcatgtcattggaatgatatatcattaaagtatgtggtcgagctatgagtatgtttctgatatttggtatgtagatggataaacaagcatagtagaggcaaacaattagcccctacctgaagcaataagagcatattagcagcaagttggtagcgccaatttctaaggtagtatagatacagagaagtctgtgatactacttgatgaatgaaatacaggtagaaaccatagagtagaatactccaggcatttggcaagcaaaataatcatccttcctcgtacatttcctttctgtacaggttggatgcgatgccatttccttttagagcatgtccaagtggggccttttgaatcaactgcctggctgcctgagaaatggcagagacatcgactgattttgcttgatgggctgacgatttccaatcttgaagcatttgacacagaaagcaagcatcttgtttttaagcgcttcattttctgaaggatcttgtgctgtgcaacaagatggtggtatgtggaatcatgtttcactttcagttttatttggaaaagaaaagcattttcaccatggtacttgtaccaggaaagttgttcaagatgctatctgtcctcattttccgttcaatttagtaaatggtatattatagttgaaagaaagcattaccagctaccataggaagtattatgttttcattcaaaatcttgtcaattttggccagagttccatccccaatgtacagatcgacaatggtgaattactatcagtttagtaaataataataaattagaaggtttttcaaaagaataattccatgatctaatgtatgtttttacctttttagatacgcatatttgctagtaaaactagtgatgaaagttgtgtcatggagatctaggaaaagaacaacacttgtatacctagaggtgatgcattttttgaaaatctgttttactggcttaacaaatttagtcactaataaaactagtgatgaaagttgtgtcatggattagtgcacaagttttgcaaacagaatttggcttaaacaaacagtttggatgagtaattccttaactttttccccttatttactaaattgatgagcatgatttaagttgtacttacagtcttgcacactggcatgatgttttacaagtttttggaagtactggaaacctaggatccaatatcctagtttgagaaaacaacactcatattgcttgttcctgttaataagcctgggtagcatgttcatcgctcagctatgccttgctcggttgctattgttggatggatagaagtggaaaaaaggggggggagggaatcagtctatgattatatacttgtatggttcaatgtagattaaaatccaaggctttgacttaaggttcctacacttatgtacttcattgcaaatttaactgtgcatatagtacattactagccaaggtagtcaatactcaatagtattatatatttcttcatattgaataaggctcgcttcatagcttaacatatatgtaccacaattttattgtccactacattatatagtacataatcacaattgcttaccacttgctgtttcttgactattaaactatttagattaaaatgaccaatattttctaccttcttttgcaaatcagtttcattacagcacttctgttaaactaaaggtatactatagggtagatttaaggttatgtagttctgttttggcgttttgtttgaaccagttggattagtattatgaatccacatccttagtttattttattgcagaacacaaatagttgcatggcttatgcctgttggagttaataggtgttaaggtaaaacatgtaagtaaaaaaggttctccaggacttgcaatgatgcacctgtacactggatcaatctgatggaccagtatctgactttagaaatgacaataaccacactgatttaggagactcaagagtcaagatatttactgggtggagagagaaaacattagtgttagatttaacggctaagctttgtgtttgcatttaaccatttgtaaatgtgaaagcaatactatttttgacagaaaaatacaattttgattagtgtatctcgcacggttaacttgattaagatctaaaatactgcaacttcatttgtactaaccattagatgatttagttgctcagtgcctgtttgggacttcatgtgatataataacataatataaccagatcggcttatatattaaccttggagctcaatcactaagtcttcttctgtattatgacatggatatttggaaatgaccaagtgcaattcgatttacatgttctatttatgctatttcttggtgttgctttaaaacaaccatttaagtaatagctatgagaaataaattagtgccacttatttttcatgattttcaatatattttttgctttgttgctgtcaaatctcttagtaaacctgataaagatataaaattagaaatttgactgcagatgccatatatagtggatagctttattaccacactggtgccaagcaaaccaagtcatagtcagccaaacatctttgatatgtttttactcgagtatctgaaataaccaaacattttggagatatgttatcatcattctattgacctctttgcataccttgtttgcatggtatcaatgcaatggaatatgccttcgaggactttgctgaaagatcacctgcaagtacatcaaaaatcaagagatgattctggccgccatgtattatgaccacagtgactcgtgctcatccaatattcttcgtttctcgtatcttaatggaaaccctcacagtagcgttgccaccttatatcgaaggacaagttgtttgaagttggctaccaattggtgccctactttaccaattgtcagatggaagggttgagcgtacattaatctggagatgcttatcgagtttgttgcatgacaagtcaatatattctattgatgtggccaatatttgcacgatatgatttcttggcaagttttagtaacattttaactcattcttccagacaatagtgcaaatcgccgaactctctattttacttgttttgttgtcatggatgaaaggtttgcaagactttgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0470900, RefSeq:Os10g0470900