Os05g0513300

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Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0513300| Description = Conserved hypothetical protein| Version = NM_001062561.2 GI:297604742 GeneID:4339300| Length = 3732 bp| Definition ...")
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Gene Name

Os05g0513300

Description

Conserved hypothetical protein

Version

NM_001062561.2 GI:297604742 GeneID:4339300

Length

3732 bp

Definition

Oryza sativa Japonica Group Os05g0513300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25515044..25518775

Sequence Coding Region

25515044..25515136,25515269..25515346,25516130..25516168,25516271..25516810,25516899..25516997
,25517508..25517693,25517787..25517892,25518753..25518775

Expression

GEO Profiles:Os05g0513300

Genome Context

<gbrowseImage1> name=NC_008398:25515044..25518775 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25515044..25518775 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgaaccagccggcgggcgaggccctcgcggccaacatctccgccatgtcccgcccggagatgtacgacctcatgtcccagatgaaggtcatgatcgaccacgaccaggagagggtgcgccggatgctcgtcgacaacccggacgtcacccgcgctctcttccgggcgcaagtagtacttggaatggtgaaagctcctaaaactgcacaatcttcagacaaggcccaacctgcagctgtgcaggcaacaccatcttcatcagttaaacctacagttcaagatcattctagttttccccaacctcagttaccttccagtcagcagaacatacaaccttctggcccattttcatctggtccgtctaatccggcatcgtctttggacctcccagctatgtcagcaaatccacaacaatcagcacaagcgaaaggttatcctatccatcaaatgcctcccacatcaacaactcagacatcccagcatcaaagtgctaccctacctcctcatgtttcatcacagtattcaaatattccatcacatatgccaatagttcatagtcagccacagcaacctttgcaaaatcctggtatgtttaaccaacagttacaaccaccattgccccagttgcctaggcctcccaacatgcagcccttcgtacaccaaatgcatccgcaagtacccagttcatttggcttgagtcatacaaatgctcctcaacacatgttgcaacaatcaatgtttcatcctggtgggaacccacaaacttccttccttacaggtcaaccgccattgcctaaccagccaccgccattgcctaaccagccaccaccccagctataccagggtagttcacatgctgcctcacactacaattctcaaagtatgcaaatggatagatcaactccatgggggcgtggtaacgcagaagcctcttcagctggcacccatttccctgggcatttgcctggcttgcccggacagatgacccaaggaattggtggtatccattcggctcgccctgaagcacctttgacgcctgagatggaaaagatgcttgtacagcaagtcttgagtatgtcacctgaccagatcaacatgctgcctccagaacaacgacagcaagtgcttcagttacagatagttgtacatgtgctgtga</cdnaseq>

Protein Sequence

<aaseq>MAANQPAGEALAANISAMSRPEMYDLMSQMKVMIDHDQERVRRM LVDNPDVTRALFRAQVVLGMVKAPKTAQSSDKAQPAAVQATPSSSVKPTVQDHSSFPQ PQLPSSQQNIQPSGPFSSGPSNPASSLDLPAMSANPQQSAQAKGYPIHQMPPTSTTQT SQHQSATLPPHVSSQYSNIPSHMPIVHSQPQQPLQNPGMFNQQLQPPLPQLPRPPNMQ PFVHQMHPQVPSSFGLSHTNAPQHMLQQSMFHPGGNPQTSFLTGQPPLPNQPPPLPNQ PPPQLYQGSSHAASHYNSQSMQMDRSTPWGRGNAEASSAGTHFPGHLPGLPGQMTQGI GGIHSARPEAPLTPEMEKMLVQQVLSMSPDQINMLPPEQRQQVLQLQIVVHVL</aaseq>

Gene Sequence

<dnaseqindica>1..93#226..303#1087..1125#1228..1767#1856..1954#2465..2650#2744..2849#3710..3732#atggcggcgaaccagccggcgggcgaggccctcgcggccaacatctccgccatgtcccgcccggagatgtacgacctcatgtcccagatgaaggtgcgcccccgcttcccccaaccctatagcccctctgcctcgctacctctgtctaggtttcgctcggattttttttctcaccgatttagcggtctctggtgcggcgccgccgccgatgatgctcgtgtgcaggtcatgatcgaccacgaccaggagagggtgcgccggatgctcgtcgacaacccggacgtcacccgcgctctcttccgggtgagattcctcgcgtcctgcgctttcagttggttttcgtttatttattatctaggagaaaggtggatgggttggtgcttctcgggcgcgaccgctctcgaaatctcgagatttgtagggttttgtgaagtttcattctggttatgaagtgtaagatttcgtgtttggttagtatagaaaagagtagattcgtttccataacaagagaacctagctctagtttagtagttggaaatctcttaaccgataagggagagactttttgctcatccagttaggccaaattcatgttgatgttggcatcgagagataatgatggactttatgcagcaaaaactgtgttggctgctctttgcatgatgagttcagtattctaattagcacatgggattctagtgtattaatgttggtaacatgctatgtttctcttcttagttttatcataatatgttcaccaagtccctgctgtttcgatgtgaaataaccggatgaagaagaatgtctactgcatagttcagtatttttcttttgtttagcaaatcatctgcatttgaatcgacggcttcttgtataatatttaactatagtttcccagcagcttgtttcataacatcccattttctcatatacacgtttgtgttccagttgatcaatataaattgtttggtgtggtgttaacaacctatgtgtatgctacattcaactgcattctcttgctcaatcagtaaattacaaatatgcattcatgcaaaatattttccttatatgcctttcttcttgcaggcgcaagtagtacttggaatggtgaaagctcctaaaactgtatgtaacttgagttattcaagttttctttacatttagcgtttgaattgctaataataaactgaaatttatcatcatcatcaagttcttgctgtatcgcaggcacaatcttcagacaaggcccaacctgcagctgtgcaggcaacaccatcttcatcagttaaacctacagttcaagatcattctagttttccccaacctcagttaccttccagtcagcagaacatacaaccttctggcccattttcatctggtccgtctaatccggcatcgtctttggacctcccagctatgtcagcaaatccacaacaatcagcacaagcgaaaggttatcctatccatcaaatgcctcccacatcaacaactcagacatcccagcatcaaagtgctaccctacctcctcatgtttcatcacagtattcaaatattccatcacatatgccaatagttcatagtcagccacagcaacctttgcaaaatcctggtatgtttaaccaacagttacaaccaccattgccccagttgcctaggcctcccaacatgcagcccttcgtacaccaaatgcatccgcaagtacccagttcatttggcttgagtcatacaaatgctcctcaacacatgttgcaacaatcaatgtttcatgtaagattctggaccaaatcttaatttcctgataacttgaagatatgatctgcaaactgaccaccaaaacatatttggaatttctcagcctggtgggaacccacaaacttccttccttacaggtcaaccgccattgcctaaccagccaccgccattgcctaaccagccaccaccccagctataccaggtacagtttcttgtctactaatagaagatatggtcagtgttaatattttgttatcttcccttgcgcattaaagttgatgtgtttgctcaacatttgctattcaaggttggatgtatgaactacattgatgaagaaaaatgtgttgtttatttgttatcatcagatcacaagagttttagctcttgaagtatcatgcagatataagtattgtgtccaatgtttagtacctactgctatgatggtgtggttatttgatgactgacagtgggatcttttatctatggagcactgacctgtgatctacactactctttagttatatgaatgatatttcttatctttcatcctataaagatgtactgtttgcatacaagaggcctatataaaatgtttggtaacattatcatctacatctgctacttggacagctttactgttgcactcttgatgtgatgtgatcatcatatgcttaggggtaaaataactcgtgcaatctttgtgttttaacagggtagttcacatgctgcctcacactacaattctcaaagtatgcaaatggatagatcaactccatgggggcgtggtaacgcagaagcctcttcagctggcacccatttccctgggcatttgcctggcttgcccggacagatgacccaaggaattggtggtatccattcggctcgccctgaagcacctgtaagtgcctgttgttaactattggagttgtctatgttgtgttttctccctttcccatagaatgaactattcacatgtttgtctttcaatcagttgacgcctgagatggaaaagatgcttgtacagcaagtcttgagtatgtcacctgaccagatcaacatgctgcctccagaacaacgacagcaagtgcttcagttacgtgatatgctacggcaatgacacatcagctgcttatgagtagaagaattccattccaacagagcccttcggatcagatctgttgtccatgctcagcttatgctttgacaccccttctgagcagccaccgttcagctgattgacatctcgactagtttgcagcttaccttgaaatgttgttgtacaatgccagtctgtcattagttacggtagatgtttgaacatgcattatgattcatgactgacaaagtgacaagggaacatcatgcttttgctacttatcctaccgcaatttcataagccatatgttcaattgatgattgaattactgtgtatttctatttatgtgagttaattatatagacctctctttttttttatctcgtttgtcaactattgtgaatctgtggtgtaattgactctttattttcattgcaattgtagcaagtcattagtacttctttttttgctacgttatcggcttatcgcttatttctgccatgaaaaccccagcatttttgcaacatgtgcttcacatggtacttattttctacctaaaaacgcaacgcaagcaccacttttatatgtatccactatccactttgcattgtttccgaattttatatgtacactcatattgcttcacaaacttagacgcatccattcatcaacgattgcttcatcatactttaaactaattcgccccatacactaaaatattcactgataatattttcaagatattatcaatatcaagatatggtaacctagtcttccactatggcaacttcgtaaatttcaaaatatatcagtgtagcctttcagagatatttatagagataaggtgacctgcgttttcagagatagttgtacatgtgctgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0513300, RefSeq:Os05g0513300