Os05g0513400

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Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0513400| Description = Protein of unknown function DUF803 family protein| Version = NM_001062562.1 GI:115464854 GeneID:4339301| Length = 34...")
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Gene Name

Os05g0513400

Description

Protein of unknown function DUF803 family protein

Version

NM_001062562.1 GI:115464854 GeneID:4339301

Length

3431 bp

Definition

Oryza sativa Japonica Group Os05g0513400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25519883..25523313

Sequence Coding Region

25520079..25520232,25520314..25520370,25520470..25520560,25520669..25520829,25520968..25521095
,25521198..25521335,25521857..25521949,25522564..25522684,25522779..25522900

Expression

GEO Profiles:Os05g0513400

Genome Context

<gbrowseImage1> name=NC_008398:25519883..25523313 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25519883..25523313 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggaggaggaggaggagggcaggagttgtcgacggacaacgtgaaggggatcgtcctggcgctcctctccagcggcttcatcggcgccagcttcatcatcaagaagaagggcctccgccgcgccgccgtcgcctccggcatccgcgcaggggttggtgggtactcgtacctcctggagcctctatggtgggttggcatgatcaccatgattgtgggagaagttgccaatttcgtcgcatacgccttcgctcccgcggttcttgttactcctcttggagcactgagcataattgttagtgcagtgctggcacattttatcctgaatgagaggttacacgcgcttggtgttcttggttgtgttatgtgcatcgcgggatcagtggtgattgttattcatgctcctcaggagcaagagattacttcagttagagaaatctggaacatggcgatacagcctgctttcttgctatatgttgcttcagttatagtggtggtcttcgtgctagtgttccatttctcccctctatatgggcagtcaaatgtgttgatctacactgccatttgctctttgatgggttctctttcggtaatgagtgttaaagctcttggtacatccttaaagttgacgtttgaggggacaaatcagttggtatatccagagacttggttctttgtgcttatagtggccacttgtgtgctaacacagatgaattacttgaacaaggcacttgatacatttaatactgcaattgtatctccaatctattatgtaatgttcacaacactaacaatacttgcaagcgtcataatgttcaaggattggtctggtcaaagccttggaagcattacttctgaaatctgtggtctgattgttgtgttgtctggtaccattttgttacatgtgacgaaggattatgaaaggattccgcaatcaagaagtatatacgcaccattgtctccctccttgacagcaagattaaacggagacttactgaagcacgtcgaggatgataggaaccccgatgaagaaaaagccttgagaaggcaagagatgtactag</cdnaseq>

Protein Sequence

<aaseq>MEGGGGGGQELSTDNVKGIVLALLSSGFIGASFIIKKKGLRRAA VASGIRAGVGGYSYLLEPLWWVGMITMIVGEVANFVAYAFAPAVLVTPLGALSIIVSA VLAHFILNERLHALGVLGCVMCIAGSVVIVIHAPQEQEITSVREIWNMAIQPAFLLYV ASVIVVVFVLVFHFSPLYGQSNVLIYTAICSLMGSLSVMSVKALGTSLKLTFEGTNQL VYPETWFFVLIVATCVLTQMNYLNKALDTFNTAIVSPIYYVMFTTLTILASVIMFKDW SGQSLGSITSEICGLIVVLSGTILLHVTKDYERIPQSRSIYAPLSPSLTARLNGDLLK HVEDDRNPDEEKALRRQEMY</aaseq>

Gene Sequence

<dnaseqindica>197..350#432..488#588..678#787..947#1086..1213#1316..1453#1975..2067#2682..2802#2897..3018#aggagccctcctggccaatcagctctcggctctccccctcttcttccttccaagcaacaaaatcctacgcggaaaaaccatccaagaaccacattcccgtcgtcaaaaacagcccgaattgtaggggaaagtagccccgagaagcgacgatcttggagggaaatctggtgtggagttcggatcgttcaatccgcggatggaaggaggaggaggaggagggcaggagttgtcgacggacaacgtgaaggggatcgtcctggcgctcctctccagcggcttcatcggcgccagcttcatcatcaagaagaagggcctccgccgcgccgccgtcgcctccggcatccgcgcaggtcgcctccccaatcccgatttcctgttcttttttccttttcgttttctgaagcttacttttcttggttggttttgtgcaggggttggtgggtactcgtacctcctggagcctctatggtgggttggcatgatcaccagtaaggtttttctttttctttcttcgatttcagtagagcagatgaagagcaatgtttattgagtagtgggtgattctgaactaagttctctcctttcagtgattgtgggagaagttgccaatttcgtcgcatacgccttcgctcccgcggttcttgttactcctcttggagcactgagcataattgttaggtgaagtactacatacatacagcaagctgtaatttgtttttgcaattgtgtattggaaagtgtgatactgagagtagtgtgtgtatttggcggtgtcttcgctttcagtgcagtgctggcacattttatcctgaatgagaggttacacgcgcttggtgttcttggttgtgttatgtgcatcgcgggatcagtggtgattgttattcatgctcctcaggagcaagagattacttcagttagagaaatctggaacatggcgatacagcctggtgagaattatcgttttatcatgggtgtgattctgtttgtaagcaaagtattaattcccggtacccttaaaaaacgatttgttcttgatataaggaagtgatatctgttaattgagatgtttccatcatcctttgcagctttcttgctatatgttgcttcagttatagtggtggtcttcgtgctagtgttccatttctcccctctatatgggcagtcaaatgtgttgatctacactgccatttgctctttgatgggttctctttcggtaatgtcacttataccatcaattgcagtattcttggttgttttatgttttgaatgactttactctccctaatggtctgctaatgtttgtccatatattcaggtaatgagtgttaaagctcttggtacatccttaaagttgacgtttgaggggacaaatcagttggtatatccagagacttggttctttgtgcttatagtggccacttgtgtgctaacacagatgaattacttgaacaaggtctgtttgttaatgcccttagggcactgataccataggtttgtgatatttatatgttctttgtcaaagtactccagctagtcagggattgattaataaagcgccaaatttgaatataaagaattattgctatatcatatactatgtcaaaagcagtattatgtcactcttatcaacaactgaacaatagaatgcttttcacaaatttgtggagatatgttttgttggtatcatgtaaacctatttagattagtcttacttcaccattccattctagctactggttctattgttgttatcaattctatgacttctgctttgcattatctggataaccagttagaggcaaaattcccctggcgttgcattgataacacttgtgtcagtgtctaaaattgtaaaattcgtatcttcaacatcattctttcgtcatgcagagtattatggtagaaaggttttattgtattagcagcattcacatacttacagtgtaacagaataactgtactttttctcgccaggcacttgatacatttaatactgcaattgtatctccaatctattatgtaatgttcacaacactaacaatacttgcaagcgtcataatgttcaaggtaatataagttcttttgtttccttgtactgcagccattcatttggtagatgatttgaatgcccaagttattttctgaaagaaactgaatatccttgatttctagttagcttcatctcttgctgggacccttttcaaaagcttcctatcactgcctttgtttcttatgtacacttcaactatgtactaaagctactggcactacaccttattacagcattcatgttacttcaaattaaaaaccatacccacaccattttagtatctgctaggagcgccatgaatccccttgagatgaaaaggttagaaaaaaaggatttggacccatgtaggagtaaatgttttcaccgtaactccagtttttttttcgcttcaaccaactgggcctatgtacatcggaaaatattgatggaacatatctttgatggattgaacagaatactttatcttcttgtgttagttggcaagtataaaatttgtctcagcttatacctgaagctcactggagtaaaacgaaatcatactatcttcactaattttccatcaacttcgagatttaagggttgacattatgagctaacccaatttcccactctactctaataattggtgcaggattggtctggtcaaagccttggaagcattacttctgaaatctgtggtctgattgttgtgttgtctggtaccattttgttacatgtgacgaaggattatgaaaggattccgcaatcaagaagtttgtaaccctaacaatccctttctacatggcatcagacattcagtctcctttcagtaatgcctataatcacataaattttctcacgatgtaggtatatacgcaccattgtctccctccttgacagcaagattaaacggagacttactgaagcacgtcgaggatgataggaaccccgatgaagaaaaagccttgagaaggcaagagatgtactagctccagtctcctgaagctcaaaaaaggatgaacaactccgattgagctaactagtgacatcagtgattgctatggtgtgttggtctgtacataatcaggcatctgcaggaattggtccaaaggattgaaggtgactgcctgcctgtaaatctttgaggtggttttgggaggctgcaggttacttccacagatagaattgaagtttgggtgcacagattcttctcatttctcttctttttcttctatctcttctggtgacgtatccccagttttgtccacggcatttctttcttgccccttgtgtagatttgagagtgagctatggagattgtattgcaactgtgaatgctgtacattattagtattattgtgaactgccgctcctgattctaatttgttctttcttctcctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0513400, RefSeq:Os05g0513400