Os10g0489200
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os10g0489200 |
|---|---|
| Description |
Similar to DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP]) |
| Version |
NM_001071452.1 GI:115482647 GeneID:4348965 |
| Length |
6676 bp |
| Definition |
Oryza sativa Japonica Group Os10g0489200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:19010175..19016850 |
| Sequence Coding Region |
19011551..19011571,19011658..19011731,19011806..19011877,19011991..19012052,19012243..19012344 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:19010175..19016850 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:19010175..19016850 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgttcctcctccgcgccaccgccacctccacctccaccgccgcctccgccgccgccgcctcgctcctcctccgatgccaccacccgctctccccgccgcctagaaccctagccctcgccctccccgctcgccctccccccgccctcctcctcccctcccgcttccgcctctcctcctccgcgtcctcctcctcccgacgccgcgcgaccggtgccgcatccgcatccgcgggcgcgggcgcggggaaggggaaggggaaggggggcaagtccagcggggggaaggcggcggccgcggcggcggcgggaggagcggccatgtcggcctcggcgggtgggggtggaggtgggggagggaagcggacggtggcggatgtgctgatggggaacgcgcgggacgcggcgaggaaggcgaagaagggggcggcgccgtcgccgaagaagctgaagacgcagccccagcccgccgcggaggcggatggcggcgcggtggcgaagccggaggagaagccgcattcgccggtgaagcccaagcggtcgtcctcgccgactaagtccaactcgccaggtgaggggaagaggtccgaatcggtggctgctggcgcgaaaccggaggcgaaggagaagccctcgccgaagaagcctaaaaccctaggtgccaaatccgacaccaagtcctccgcggaaggcgttgagaaggagaagaggaggtcaccatctccgacgaaggcaaaagcgctagcttctgaatcccaggacataaagaagccctcctcacctaagaagaccaaagccttggatgcccccaagtctgaggaaaaggacaccaccctcgagctcaagaagaagggcagtgaattcaatcccatggctgctgcttattggagccccgaggagcccgtgccgttcctgttcctcgctcgggcacttgacctcatctctaatgagtctggaaggattgttatcacggagatcctatcgaatgtattccgcacggtgattgccacaacaccagaggatctcctcgcgacagtatacctctcagccaaccggattgcgccgcctcatgaagggactgaacttggaattggggatgcatcaattatccgtgcacttgcggaggcatacggccgcagagaggagcatgtcaagaagaacctaaaggagttgggcgatttggggcttgttgcaaaagcaagcaggttgtcacagaagatgatgtacaaaccgaaaccactgacgatctcacatgtacttgcaaaattccggacaattgcaaaggaatcaggcaaagatagtcaagataagaaaagaaatcatatcaaaggacttctcgttgccgcaactgactgtgaacctcaatacattacacgactacttcagtcgaagatgaggattgggttagcagaaaaaaccgtccagatggctcttgggcaagctgctgtgtattctgaaaaacattctccaccgtcaaaaatccaatccccttttgaagaggctgcaaaaataattaaacaagtatattcagttcttccaatatacgataaaattgtcccagctattctagaagttggtgtttggaaacttccagagatatgcagtttttctattggtgttcctgttggtcctatgttggcaaaagcaacaaagtctgtctcagagatcatagacaaatttcagggtcttgagtacacttgtgagtacaagtatgatggtgaacgggctcagatacattgcctggaagatggatcagtagagatctatagtcgtaatgctgagaggaacactgggaagtatcctgatgttgttgatgcggtttctagattccggaagcctacagtcaaatcatttgtcttggactgtgaaattgttgcttatgaccgtgaaaagaagaaaatattaccttttcagatacttagcacacgggcccgcaagggtgttaccataagtgatatcaaagtgtcagtctgtacttttggctttgatattctttacatcaatggcaagcctcttctccaggaacaactgaaagttcgacgagagcatctttacaactcctttgaggaagtaccaggtgtttttcaattggcaacttcaattacatcaaatgacctcgaggagatacaaaaatttcttgacacagctgtcaactccagttgtgaagggttgattatcaagacattggataaggatgctacatatgagccagcaaaacgatcgaacaattggttgaaattgaagaaagactacatggacagcattggagactctttggatttggtgccaattgctgcctttcatgggagaggaaaacgtacaggtgtatatggatcattcctcctggcatgttacgatgagcagaacgaagaataccaaacaatctgcaacataggcactggattttctgagcaacagcttgaggagcgttctgtgagccttcgaactaaagcaataccaaaaccaaagttgtgctttcattttttttag</cdnaseq> |
| Protein Sequence |
<aaseq>MFLLRATATSTSTAASAAAASLLLRCHHPLSPPPRTLALALPAR PPPALLLPSRFRLSSSASSSSRRRATGAASASAGAGAGKGKGKGGKSSGGKAAAAAAA GGAAMSASAGGGGGGGGKRTVADVLMGNARDAARKAKKGAAPSPKKLKTQPQPAAEAD GGAVAKPEEKPHSPVKPKRSSSPTKSNSPGEGKRSESVAAGAKPEAKEKPSPKKPKTL GAKSDTKSSAEGVEKEKRRSPSPTKAKALASESQDIKKPSSPKKTKALDAPKSEEKDT TLELKKKGSEFNPMAAAYWSPEEPVPFLFLARALDLISNESGRIVITEILSNVFRTVI ATTPEDLLATVYLSANRIAPPHEGTELGIGDASIIRALAEAYGRREEHVKKNLKELGD LGLVAKASRLSQKMMYKPKPLTISHVLAKFRTIAKESGKDSQDKKRNHIKGLLVAATD CEPQYITRLLQSKMRIGLAEKTVQMALGQAAVYSEKHSPPSKIQSPFEEAAKIIKQVY SVLPIYDKIVPAILEVGVWKLPEICSFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTC EYKYDGERAQIHCLEDGSVEIYSRNAERNTGKYPDVVDAVSRFRKPTVKSFVLDCEIV AYDREKKKILPFQILSTRARKGVTISDIKVSVCTFGFDILYINGKPLLQEQLKVRREH LYNSFEEVPGVFQLATSITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRS NNWLKLKKDYMDSIGDSLDLVPIAAFHGRGKRTGVYGSFLLACYDEQNEEYQTICNIG TGFSEQQLEERSVSLRTKAIPKPKLCFHFF</aaseq> |
| Gene Sequence |
<dnaseqindica>5280..5300#5120..5193#4974..5045#4799..4860#4507..4608#3979..4091#3529..3660#3226..3313#2758..2852#2446..2676#1789..1902#1603..1704#1262..1378#5..1168#tttgatgttcctcctccgcgccaccgccacctccacctccaccgccgcctccgccgccgccgcctcgctcctcctccgatgccaccacccgctctccccgccgcctagaaccctagccctcgccctccccgctcgccctccccccgccctcctcctcccctcccgcttccgcctctcctcctccgcgtcctcctcctcccgacgccgcgcgaccggtgccgcatccgcatccgcgggcgcgggcgcggggaaggggaaggggaaggggggcaagtccagcggggggaaggcggcggccgcggcggcggcgggaggagcggccatgtcggcctcggcgggtgggggtggaggtgggggagggaagcggacggtggcggatgtgctgatggggaacgcgcgggacgcggcgaggaaggcgaagaagggggcggcgccgtcgccgaagaagctgaagacgcagccccagcccgccgcggaggcggatggcggcgcggtggcgaagccggaggagaagccgcattcgccggtgaagcccaagcggtcgtcctcgccgactaagtccaactcgccaggtgaggggaagaggtccgaatcggtggctgctggcgcgaaaccggaggcgaaggagaagccctcgccgaagaagcctaaaaccctaggtgccaaatccgacaccaagtcctccgcggaaggcgttgagaaggagaagaggaggtcaccatctccgacgaaggcaaaagcgctagcttctgaatcccaggacataaagaagccctcctcacctaagaagaccaaagccttggatgcccccaagtctgaggaaaaggacaccaccctcgagctcaagaagaagggcagtgaattcaatcccatggctgctgcttattggagccccgaggagcccgtgccgttcctgttcctcgctcgggcacttgacctcatctctaatgagtctggaaggattgttatcacggagatcctatcgaatgtattccgcacggtgattgccacaacaccagaggatctcctcgcgacagtatacctctcagccaaccggattgcgccgcctcatgaagggactgaacttggaattggggatgcatcaattatccgtgcacttgcggaggcatacggccgcagagaggagcatgtcaagaagaacctaaaggtaattaaattggggacaatgtaggttcaatcaatgagcaagcattatgaagctgaagtcctaacttgaacatgtttctgttggccattgtaggagttgggcgatttggggcttgttgcaaaagcaagcaggttgtcacagaagatgatgtacaaaccgaaaccactgacgatctcacatgtacttgcaaaattccggacaattgcaaaggttttattcctctcatttctcattacccattattcggactgatattgtcaacatgaactgaacattcttgtcttgatggtgccgagacgattgattgtcagaagtaaatccacactgagtagtaagcaatgggattagagggagggtactctagttgcagaatgcactactatgcattgtcatttcagagatcatttagcaaccatacttttttttttcatcaggaatcaggcaaagatagtcaagataagaaaagaaatcatatcaaaggacttctcgttgccgcaactgactgtgaacctcaatacattacacgactacttcaggtaactcattttaatgtgcctggtgtccatgagtatactgtagtctttgcctctgcctgaagcattaactgttacttgttacagtcgaagatgaggattgggttagcagaaaaaaccgtccagatggctcttgggcaagctgctgtgtattctgaaaaacattctccaccgtcaaaaatccaatccccttttgaagaggttggcgcacatttcttctatttaaagttttaccgtaatgtttgattaatgtggataagtttcaaaatacttgcattgtctgcgcaatagtaatgtttgatttgagtggatggatttccaaatgcttgggttatctacagataaatgcacatgattcaagaggttttcagtttgcattcaacatagttctaatttgttgatccctgctattcctactgaaagtttggccttagaaaatttgatacggttgctagctcaggaattgtaatggcactattttcttgagtgctagcaatccttctgtagccactgcatctagttaatcttggtggtgcatctaatctacattggaacttatgtgagttgcaattttgcgttatgctcttgagagtgctcctgctagcacctgtgtggaggattattaatgtggtttgcttgttcagtaccatcgtattttgtttctggcatcatattgaaagctgtgcatgaataccaacaattatgatatgttctgatgcttattttaaactttgttttttgaaggctgcaaaaataattaaacaagtatattcagttcttccaatatacgataaaattgtcccagctattctagaagttggtgtttggaaacttccagagatatgcagtttttctattggtgttcctgttggtcctatgttggcaaaagcaacaaagtctgtctcagagatcatagacaaatttcagggtcttgagtacacttgtgagtacaagtatgatggtgaacgggctcaggtacgaacaagcccatgattggttagcttttcttatattctgaatttatgatccagtaacacttgatactttggaatgaagatacattgcctggaagatggatcagtagagatctatagtcgtaatgctgagaggaacactgggaagtatcctgatgttgttgatgcggtttctaggtatactgtcctatttttttgccactatcgtgatctcagatttggcggtccactcattgtttccctctttttaaggcctttgatgctaagtttaccttacactgcaacagttgtcgaccaccaatagttcaaattctacatacatatatatgtacagtttggtcaacttgttatttattaggtgctttgctagatttgtttattactttattaaatttaaaacccccttctctttactttatcatgttacgtccacatgtactaacactgttaagccaaacccgtataagctatttaacttgcccatctattgttcatttgctcttgcacatctagttccgaacaaatattatcctgttgcatctaaatgcagattccggaagcctacagtcaaatcatttgtcttggactgtgaaattgttgcttatgaccgtgaaaagaagaaaatattaccttttcaggtttgtatttcgtcccaaacaagatttttgtttggttcataatgaccaccaatataaatatgattatacaacaccaagcagttcagctagaatttttatctgtttcacattagtaaatttttgtttgttttatcgcccttgttttcttagctgatttttatgtatctgttaacactagctctgaggatccagtgattgattcttctttcttgcagatacttagcacacgggcccgcaagggtgttaccataagtgatatcaaagtgtcagtctgtacttttggctttgatattctttacatcaatggcaagcctcttctccaggaacaactgaaagttcgacgagaggtattgttttttctgtactgttatgagctgtattgtttaagttcatctatccattgctatcccatagggcacgttttaacaaagccatggctgcagtttttttacagactatatctgagtcagaatcacttatttgttcagccgtgcctgttgttacatttatcgcatgtgctgcatatgttttcatgaaaaaaaggatctgttgaagtctatttcatagctgatacacatgaagtgttatttcctcaaatccaacaaaataaacctaattcagtcaaatgtttctggagatattccattgacactgaatgcttgcagcatctttacaactcctttgaggaagtaccaggtgtttttcaattggcaacttcaattacatcaaatgacctcgaggagatacaaaaatttcttgacacagctgtcaactccaggtaaatggaatttcagtagcagttggtttaatttgggccaacttatcatacctgtttctagtttggtctgccaccttgcttgttctagaaaattcaacggaagttcaatcgttctctgcagaattatttatagcagatactgctcaatttcaactttgtcttattgttaagttgatttctattgaattcttgtgaaaggacaccttacaaactattagcccgcctaggatgcatatatctgtgaaaataagatgtcaaattaaaccatgcaaaatgtagcattatcatgactttaggactccagtgaaggaataaaaacattttaggcagggatttttaatgatttttgggtgttgcaagtttgcaattagactattggagttttgtcctgccactaagatcaatcgctgtgcagttgtgaagggttgattatcaagacattggataaggatgctacatatgagccagcaaaacgatcgaacaattggttgaaattgaagaaagactacatggacaggtcagatttcatgctgtgccagattttactcatctttgattacacaacagattagatctagtaaattgatgtgggctagataaaaaaatcatgtgtttatcctatatgttacggtccaaccattatagttttttgtgtaccatttactcggcataggatcatttaattgtttttttttcttggggagcagcattggagactctttggatttggtgccaattgctgcctttcatgggagaggaaaacgtacaggtatgctttcttccatcatacgtactgaaaataaaaatgagttaaacaaagtaatgtgcatatggatcattcctcatggatttatctgtgtccgtttggctcgtgcttactaggtgtatatggatcattcctcctggcatgttacgatgagcagaacgaagaataccaaacaatctgcaacataggtatgttggttttttaaccttatcctgttagtatgatgatttgattcatgttttatatcttgatccacatttaggcactggattttctgagcaacagcttgaggagcgttctgtgagccttcgaactaaagcaataccaaaaccaaaggtggtgcatcccttcagcctgctattgcatgattattctctttttatcttttgttcattgtcttgtcctgttgttctgttctacagttgtgctttcattttttttaggcatactataggtttgctgacacaatggacccagatgtgtggtttgagccttcagaggtaatgcccaccttaaacttttgactaccgactgtttcttagttgtactcgtacttcttgttaggggcttttgccatcactcactgctggtctggaactcttgatttgattgacctgggtttgtcccattcttctcaaatctgaactcagtttatgatatgaatttctacttattcaacaccaatgctttatgttttacccctatatattctacattttttttgttgatgttacattccaatgtttttgaatttcatatcttccaaatgaactattgtttgatctctagattttctatacgtgtaccatagcaccttactacatatggaattgaccgaattgttttgggaattttctagaacttctaagcatatttttgtgtagtgttttacatggttttattgaatttgttgttttacttcttacttccccggatatattttgaccctaaagtttaaattaaggggtctaggcagctttgatttaattttctgattgttgaggtttgctattatattttgttgatcctcaggtttgggaggtgaaagctgctgatttgagcattagtcctgtgcatcgtgctgccaatggtatagttgatccgaacaaggttggttttgctatccgccgtaatcccgttctgtagtatatatgcatgagtgcatgattttgatactaatagccaaattgaaccagggcatctccctaagatttcctcgcttgttacgtgttcgtgatgataaaaatccagaacaggcaaccacatctgagcaagtaagtttctcccgcttgtttctttctttatggcacgatcttaagatttctcatgcatgactactactatgttcaaattcccaggttgctgatatgtaccgtgcacaaaagatataccatgcgaacaacaataacgatgatgaggatgatgactagactatgaggtaaacaccgaacttattttaaatctccagataattgtttggttagaaatattcattcatctgaatattttccaggccactaacaagagttcatgtccaggatttcgtttcgtcttggcctcgacgttctgattggttgacatgtagcgttttaggtgcgagattcgtaatgtgattctttttttttcacacgctaaatccaaactggtggtgcggtgttgcacagtagggaattgaagagcatggccgcgtcgctcgtgtggcgctaatacaaaccttcctgttaacctgagatgtacatacatgataacatgagtgacccttcgattggcaagggcactgtttgatttttatctagacatgcactgtttgatttttttt</dnaseqindica> 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