Os10g0494800
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os10g0494800 |
|---|---|
| Description |
Similar to Katanin p80 WD40-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin) |
| Version |
NM_001071481.1 GI:115482705 GeneID:4348995 |
| Length |
7072 bp |
| Definition |
Oryza sativa Japonica Group Os10g0494800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:19255999..19263070 |
| Sequence Coding Region |
19256186..19256264,19256372..19256440,19256549..19256665,19256735..19256850,19256931..19257005 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:19255999..19263070 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:19255999..19263070 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccaccaagcgcgcgtacaagctccaggagtttgttgcgcatgcttccgatgtcaactgtgtcaagtttgggaggaagacatcaagaatcctcatcactggtggggaggaccaaaaggtcaatctttgggccatagggaaacccagttccatcttgagcctgtcaggccttacgagtccagttgagtcagtgagctttgactcatctgaagctatgataggtgctggagcatcaagtgggacaataaagatatgggatgtagatgaagcaaaagtcgttcgtacttttactggacatagatcgagttgtgcgtcccttgatttccatccttttggagaattcttcgcttctgggtcttcagacactaacatgaaaatatgggatatgcggaaaaagggatgcattcacacatataaaggtcacacacggcggattgatgtgcttagattcactcctgatggccggtggattgtctctggtggatctgataactctgtaaagatctgggatttgacagctggaaagctcttgcatgactttaggaatcatgaaggcccaattaactgcttagattttcacccccatgagttcttattggctacaggttcagctgataagacagttaagttttgggaccttgaaacttttgagttgattggttcttctggacctgagaatagccgggaatactttgtgccagctagtgtagttcggtctatgacattcaacaaagatggtaaatcacttttttgcggattacatgaaagtttgaaggttctttcctgggaacccatcatatgccatgatgtggttgatgttggctggtccacattaggggatctaattgttcatgagggaaaacttcttggttgctcatataaccaaagttgtgctggaatatgggtcgtggacttgatgaaaattgaaccgtatgctgttagcattgctgaagcacatttgaatgaaagcgtaaataggtcaatacaggctgataatagcatatcatcagtgttgggaaggttatcagtttccagaagcccagccaaggaagcatcttccgatactttgcttaaactctcaatgtctgcttcaaaagaagttcctgttccagcttcttctgcagtgacaaagaaactaccaaaagaacctataacaagcaatattcggctcacaagatctgattctctaccagttgtttctcctagggttagattgaacccaaagttctctgatgaccagaagaggcagacagattatgctgtgcctataacaactccaagaattcgctccaaagtggatctctctataggtgctagagcattccatcgtaactcagtaccatcggttgctcccacaaatagatccaggtccaaaatatctgcatatagtagtgaaggatcgtcgttcatccctgttgttgtccctaggcatatccctaaagtggattctggtcccaatctcagtaaagttctcactactgatttaacaattgtcgagcctcaagacatagaacgaggtggtctggctgtggattgtggagaagatgataaattggtgtgtgtgattgattcaaggagctcaaatatgggtgtacaaaatggccgtagaagaaaagccggtgatattattacacataaagaaaccccagagactgctttgacagttaatatggatcgtgacttcagaagaaaggctcctgaaactgaaagtatgcaacaggacatatttcattcagagcccattagttcaaaatgtaaatatattaaagaaacttcaggtgctggagacattaacttgtctgggtcagccattactgaaagtgtcaagtctaatgaaggtggtgactggtataatgcatcttcttttgtaaaaccaaatttgactgttggaaggaatccagagacttcatacatcaacagaagaacaatgtttggattgagacattcaacggattcaagtgaaaaacacgctgttgaacatgggccttccaatttgtctgcaagttatgagagaaatcagtatgcaccaacactacataacttgaggaggcgctcttcggttgctagagaacagagtgcatcagctggtgatgaagatgatattgctgatctgatggaaaaccatcaagaattcattcatgcagtgaagtctcggctaacaaaactagaggtggtttacaggtgttggcacaataacgatgtaaagggatctattgatgctacacgcaggattcaggatcttgatgttaccgccgatataattagtgttctgatggagaatgataattctatcacactagatatttgtacttgtgtcttacctcttgcctccagtgttcttgaaaaaagcagctatgacaggcacctgaaagttgccttggagatgatccttaagcttgtgaaaagctttggttctacaatatcttcagctgtgtcatctactccaccagttggtgtagacattgaggcagaacagaggctcaatcggtgcaatttgtgctttctagagctgataaaagttcacagcgttctctttgccctgacacggcggcaaggcgaggttggaagatctgcacaggagctaagcctctttcttcaggatatctttcagctgacaagcagatag</cdnaseq> |
| Protein Sequence |
<aaseq>MATKRAYKLQEFVAHASDVNCVKFGRKTSRILITGGEDQKVNLW AIGKPSSILSLSGLTSPVESVSFDSSEAMIGAGASSGTIKIWDVDEAKVVRTFTGHRS SCASLDFHPFGEFFASGSSDTNMKIWDMRKKGCIHTYKGHTRRIDVLRFTPDGRWIVS GGSDNSVKIWDLTAGKLLHDFRNHEGPINCLDFHPHEFLLATGSADKTVKFWDLETFE LIGSSGPENSREYFVPASVVRSMTFNKDGKSLFCGLHESLKVLSWEPIICHDVVDVGW STLGDLIVHEGKLLGCSYNQSCAGIWVVDLMKIEPYAVSIAEAHLNESVNRSIQADNS ISSVLGRLSVSRSPAKEASSDTLLKLSMSASKEVPVPASSAVTKKLPKEPITSNIRLT RSDSLPVVSPRVRLNPKFSDDQKRQTDYAVPITTPRIRSKVDLSIGARAFHRNSVPSV APTNRSRSKISAYSSEGSSFIPVVVPRHIPKVDSGPNLSKVLTTDLTIVEPQDIERGG LAVDCGEDDKLVCVIDSRSSNMGVQNGRRRKAGDIITHKETPETALTVNMDRDFRRKA PETESMQQDIFHSEPISSKCKYIKETSGAGDINLSGSAITESVKSNEGGDWYNASSFV KPNLTVGRNPETSYINRRTMFGLRHSTDSSEKHAVEHGPSNLSASYERNQYAPTLHNL RRRSSVAREQSASAGDEDDIADLMENHQEFIHAVKSRLTKLEVVYRCWHNNDVKGSID ATRRIQDLDVTADIISVLMENDNSITLDICTCVLPLASSVLEKSSYDRHLKVALEMIL KLVKSFGSTISSAVSSTPPVGVDIEAEQRLNRCNLCFLELIKVHSVLFALTRRQGEVG RSAQELSLFLQDIFQLTSR</aaseq> |
| Gene Sequence |
<dnaseqindica>6807..6885#6631..6699#6406..6522#6221..6336#6066..6140#5859..5984#5698..5759#4683..5621#4443..4566#4229..4372#4064..4138#3907..3930#3194..3264#2882..2984#2508..2734#2262..2379#1978..2108#36..63#atcgaagcttttcatgactgcagccatcgccgcagatggccaccaagcgcgcgtacaagctccgtatcctcgattcttcttgccgcttgaatcctcggtttgggagttttagattaaatttgagttctttttttgggtcgagttgttcttgccctgcctgcttatcgttgtatgtaatctaggtttctgatcgagttggggggagtccgcgtgtggtgatcggtttcgatctgcgctcatgttattttctttgtgctgttcttggtttgatgattgggtttatcgcggtacgctgctgggattgatttggtacgaattccaatgagatgagacgatttgagaccatgtgaactctactgttcagctctagcagatcttccttttgtatgcgtgtgcaagtattatgtagttctctgcttaaagccagactaaattttgctgttttttttttttgccggaatgaccgaaggaggtcattcaatgtaattaagacggaagaaaagattacaagaaaagttttacatcgacagttggctgtcgagaaaggatgtgcaccagagcacacgccccgaaccatgtgccaaccgcctaaacacacgctacagagagggaagtccgttacccaatccgaatccaccatctgaacatcggcggcacatggcttccgccacacccgaactgacgcccctccgtcggccgacttcatcgaaccaccatccctgagagctgacccaggacccctccgttcaaccacccaccggcctcctcgccagatctggccgaaggagaacctgggactaggtggcattgcttcagcagcctgagcttcccccactgacaagctgccgcctcaatccagcttagaaactccccacaaagaaggggaggagctctaggaagggcgagggtgccgatcgacaacgaggaaaacgaccaaccgccgccaactccctttgcattgccatctgggcctgcaccaatgccagaaacgctgccgctccggctccggtgccacccgccggcgccccctttgtccggcctccttgccccacctagccgtgccgcgccgctactggccgctaagggcaccgcggcagcccagctgcccgaccgtcgaggcctagccacgccatagggcccggcggcagcgaaggcagaggcgggggcgggggaggcggcagggtgttgaccagcttccgccgccgctcccaaccgccgccgccgccgccgcacggttcggccgcacgccgccgccatgcacctcgacggcatccgcatccgcgtccaggccggcaccgccgccacgcaaccggagccgccaccgccgccgagctgccaccgtcgccgagccgcgacagcgccgccgaggcgccaccgccgcccctagccgcctcgcgccgagattcaggcgaggatggccggatccggacttggggactccggatccgccgcctccccgcaccgccccaacatcgacgtcgccaactccgaccgcggtgggggtcttcgtttgttttagttcgagagaataaagactattattagtgaagttttatttcaaaaataaatattagttagagcattgagttgtcatcttacaaaaattgactcctgtattatcttctgcttggatagtttctgctgcaaataggatcacactagggtcagatgctgacacttaccatgagaaaaaattggatggatgaattaatcaatacaaaatcttcaaatatttattatgtgtagctcttttctttaagaatttagatggtgagatatcatggataatacattcactgaaatgaacatggtttaacccgaaaagcattgttatgtcagtaaattgcgttaccttgttgaaatgtatattttgaaatacccttccaaaaaagtgattttctgaagcaacactgaaaattgcccaaatgccaaatggtaatctacaacagccaaccatgtttccttgacaatggccagaggagtttgttgcgcatgcttccgatgtcaactgtgtcaagtttgggaggaagacatcaagaatcctcatcactggtggggaggaccaaaaggtcaatctttgggccatagggaaacccagttccatcttggtaatattccactggcctctgaaaggtcaatcgttcatgtgtaatacttcttttttttcttccttgtctttgttactcagttttatggggtctttattagtcagtttgaaagttacatctcttcttacaagttaatgtcactatgaattgcagagcctgtcaggccttacgagtccagttgagtcagtgagctttgactcatctgaagctatgataggtgctggagcatcaagtgggacaataaagatatgggatgtagatgaagcaaaaggtacgaactaatatggataacaatttgctgcattattcatttaaagaaacacttcgctgcatttaaaccgaagtataaactgtagttgtatcacacaactataactttgttaatttttttttgctcagtcgttcgtacttttactggacatagatcgagttgtgcgtcccttgatttccatccttttggagaattcttcgcttctgggtcttcagacactaacatgaaaatatgggatatgcggaaaaagggatgcattcacacatataaaggtcacacacggcggattgatgtgcttagattcactcctgatggccggtggattgtctctggtggatctgataactctgtaaaggtacaattctgaatatgtctattaatacaaggcaaacacaatcacagcactggaaaagaaataacatgctatgctgattattcgaaccattaagctgtcatatgtatctctcgggtcactgaaattgttttctgatcatcttgctagatctgggatttgacagctggaaagctcttgcatgactttaggaatcatgaaggcccaattaactgcttagattttcacccccatgagttcttattggctacaggttagatagatgatcctttattataacacttgtagtagatgcattcactgtagtgtactagctggcagtttgatgacatgttttcctccaaaattatgctattatgaatattattatttctggcatggatcattgttgactgatgcttatttgtgtcatctagacttgacagcctatacattgctttcttgtttcaaaaatatttgcaggttcagctgataagacagttaagttttgggaccttgaaacttttgagttgattggttcttctggacctgaggtattgaatatattaattgttgtatatcttaaagcaattcaagttaatgttcagagtttgagccaatttagatctataaataccatcgctatgtagcgctctgtcatactatctcctatatatgagggtctcatgtaagtgttagatacatgtcatcatgttcttggcttcaaagagattcaattaaaaccaagttccagtaatctatttaagtttatggtaattctgcctaaacctggtcctttaaaaggggataaaagaacacagcaagtcaacattaagcagtacttctgtgcatatttggagtcactaaatggtaagatatcaatctgaccagtgattcaggcatccagcatgtcaaaccaaatgatataatcatacctgaaattctctctctgcaaatagctttcaagagcttatataatttaatattcatttatgcaaaacgatatgtcagttcaagtttttacccacgttccttaatttgtacctttggaccctaatgttttgtcagttagataatacatacccatccttaaagaaaagattgattgtaccttgagctataccatgagttatttcaatctccgctccttatcttcttgtttcgtggatgtaactaatatattctgtttcttgcagaatagccgggaatactttgtgccagtacgttgatccttaatccattctatctatatttttctactcaaatggatggcagtgctttctgtctacaaagttctcgatgtaaatgaaataatcaatacttatcttatctgcatgtactcttaattttcaggctagtgtagttcggtctatgacattcaacaaagatggtaaatcacttttttgcggattacatgaaagtttgaaggtaactgctctgttggactgtcgatatcctctgaagctttggaaaatgacctcacaacagattttatttatttattttttttacctgtaggttctttcctgggaacccatcatatgccatgatgtggttgatgttggctggtccacattaggggatctaattgttcatgagggaaaacttcttggttgctcatataaccaaagttgtgctggaatatgggtcgtggacttgatggtatggttctacactatttactttgttaccaattgggcagttctgatatgttacttatcccaaatttcagaaaattgaaccgtatgctgttagcattgctgaagcacatttgaatgaaagcgtaaataggtcaatacaggctgataatagcatatcatcagtgttgggaaggttatcagtttccagaagcccaggtaaacaattatcatttggcgtataacatcaatataatttttcttcatccattatccttgagttatgattcttcaccctaaaactatgtatattttgctatttctcgaaaccgcagccaaggaagcatcttccgatactttgcttaaactctcaatgtctgcttcaaaagaagttcctgttccagcttcttctgcagtgacaaagaaactaccaaaagaacctataacaagcaatattcggctcacaagatctgattctctaccagttgtttctcctagggttagattgaacccaaagttctctgatgaccagaagaggcagacagattatgctgtgcctataacaactccaagaattcgctccaaagtggatctctctataggtgctagagcattccatcgtaactcagtaccatcggttgctcccacaaatagatccaggtccaaaatatctgcatatagtagtgaaggatcgtcgttcatccctgttgttgtccctaggcatatccctaaagtggattctggtcccaatctcagtaaagttctcactactgatttaacaattgtcgagcctcaagacatagaacgaggtggtctggctgtggattgtggagaagatgataaattggtgtgtgtgattgattcaaggagctcaaatatgggtgtacaaaatggccgtagaagaaaagccggtgatattattacacataaagaaaccccagagactgctttgacagttaatatggatcgtgacttcagaagaaaggctcctgaaactgaaagtatgcaacaggacatatttcattcagagcccattagttcaaaatgtaaatatattaaagaaacttcaggtgctggagacattaacttgtctgggtcagccattactgaaagtgtcaagtctaatgaaggtggtgactggtataatgcatcttcttttgtaaaaccaaatttgactgttggaaggaatccagagacttcatacatcaacagaagaacaatgtttggattgagacattcaacggattcaagtgaaaaacacgctgttgaacatggtaagtgttcaaaccgatatgttattatttctctttgtttcccttcaacttaccttgctctttgttgggaggacagggccttccaatttgtctgcaagttatgagagaaatcagtatgcaccaacactacataacttggtatgcatactccaaatttccagattatgtcattcacgatgtatttattcttatgttggtaccaaatccatgttatgccctaccttattgtttctgcagaggaggcgctcttcggttgctagagaacagagtgcatcagctggtgatgaagatgatattgctgatctgatggaaaaccatcaagaattcattcatgcagtgaagtctcggctaacaaaactagaggttataacgagtatggtcatctatagcatctgctattttgagatacctcgagtaacggtaatctcaatgtgttatgtgtaggtggtttacaggtgttggcacaataacgatgtaaagggatctattgatgctacacgcaggattcaggatcttgatgtgtgtacttcttaattaccatcctgttctgttgaagttccatccattataatgtctgatgagttctaccacttttacaggttaccgccgatataattagtgttctgatggagaatgataattctatcacactagatatttgtacttgtgtcttacctcttgcctccagtgttcttgaaaaaagcagctatgacaggtacttttccttgaatatattcttgtagcatttctcttagtaagtatgcattgacatctcctattgcaggcacctgaaagttgccttggagatgatccttaagcttgtgaaaagctttggttctacaatatcttcagctgtgtcatctactccaccagttggtgtagacattgaggcagaacagaggtaacctttcttgcctctcattttcattgcatctaaatacattgctgaggcttcatgtacattacaatggttcaattcacacatgtgaatttgttgctactttgctaggctcaatcggtgcaatttgtgctttctagagctgataaaagttcacagcgttctctttgccctgacacggtaaattcttggtttagcttcaaaaaggcattgctttgagattctgaaagtctcattggcgattcaaagaactaaaaatcgattcatttgtgcatcctgttctataggcggcaaggcgaggttggaagatctgcacaggagctaagcctctttcttcaggatatctttcagctgacaagcagatagatgatatgatagccatacggcgatatttcgcccaaatactcatcttttttccttggaacagatagacagctatagagaaagatatagataggaaacatacaggtcatccttggcaaatgtacagcaaattcttgtaccatccggtttgcaatcaaatactagtcaacaaaaattcaaaaatctctgc</dnaseqindica> 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