Os09g0553700

From RiceWiki
Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0553700| Description = Similar to PRLI-interacting factor A (Fragment)| Version = NM_001070417.1 GI:115480576 GeneID:4347803| Length = 1337...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0553700

Description

Similar to PRLI-interacting factor A (Fragment)

Version

NM_001070417.1 GI:115480576 GeneID:4347803

Length

1337 bp

Definition

Oryza sativa Japonica Group Os09g0553700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22768856..22770192

Sequence Coding Region

22769072..22769935

Expression

GEO Profiles:Os09g0553700

Genome Context

<gbrowseImage1> name=NC_008402:22768856..22770192 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22768856..22770192 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgaccccatgatgcggccaccggcgcagcagccgccgctgcagtaccagatgtggccgccgccgccgccgccggtgatggagttgccggtggtgttcgtcggggtgaagccggtgaggccggcgtggaagcgggtggcgaggcagccggggtggaagcagcggaaggcggcggcgtcggcggcggcggtgggggcgaggtggggcggtgcggcggcgccccgcaacacgacgtcgtacctgatccgggccaagcgggcggggggcgtggcgtcgctggtgtcgccgtgccccgtcacgccggccgtgctgccgacgccgcagctgtcgccggcgcgcgaggtggtggtggagatggccaaggagaagtggggcgtcgacgggtacggctccatgaagggcctcatccgcctccgctcccaggccgccgacgccggtggcctccccggcgaggactccggatccggcgagagcgacgtggaggagcacgtcgaggtggagcgccgcctcgaccacgacctcagccgcttcgagatggtgcagctccccgtcgcggccggcgactgcgaggacgacgaagacgacgacgacggcgacgaggcccgcaccgcgcggctggaggaggagaacctgaccctgcgcgagcggctgttcctgatggagcgcgacatggacgacctccgccgccgcctcctcgccgtggaaaccctctgccgcgaccgccaccgcgacggctgcgtggtggacgctgccggcgtcgtcgccgaggagacggtgctctccgagagcgtcgccggcgccgacctcgccggagtcggagacgacgacggtgacacggcggcggacgccatgaaagcgtga</cdnaseq>

Protein Sequence

<aaseq>MNDPMMRPPAQQPPLQYQMWPPPPPPVMELPVVFVGVKPVRPAW KRVARQPGWKQRKAAASAAAVGARWGGAAAPRNTTSYLIRAKRAGGVASLVSPCPVTP AVLPTPQLSPAREVVVEMAKEKWGVDGYGSMKGLIRLRSQAADAGGLPGEDSGSGESD VEEHVEVERRLDHDLSRFEMVQLPVAAGDCEDDEDDDDGDEARTARLEEENLTLRERL FLMERDMDDLRRRLLAVETLCRDRHRDGCVVDAAGVVAEETVLSESVAGADLAGVGDD DGDTAADAMKA</aaseq>

Gene Sequence

<dnaseqindica>258..1121#accttctctcctcgctctctctctctcttcctctctcgcttcgcttttctcccccaaatcggatcgaacaaaattcgtaaattaatctcataaaaacacacacgaagcgaacggattcgaagagagcttaacacgagacggcttcgatcgatcccgttttggggagctaatcgtgtggtttttgttggattgttttttttgggtgttaatctagggttagggtttcggatctggacgattagtccccaaatccatccatgaatgaccccatgatgcggccaccggcgcagcagccgccgctgcagtaccagatgtggccgccgccgccgccgccggtgatggagttgccggtggtgttcgtcggggtgaagccggtgaggccggcgtggaagcgggtggcgaggcagccggggtggaagcagcggaaggcggcggcgtcggcggcggcggtgggggcgaggtggggcggtgcggcggcgccccgcaacacgacgtcgtacctgatccgggccaagcgggcggggggcgtggcgtcgctggtgtcgccgtgccccgtcacgccggccgtgctgccgacgccgcagctgtcgccggcgcgcgaggtggtggtggagatggccaaggagaagtggggcgtcgacgggtacggctccatgaagggcctcatccgcctccgctcccaggccgccgacgccggtggcctccccggcgaggactccggatccggcgagagcgacgtggaggagcacgtcgaggtggagcgccgcctcgaccacgacctcagccgcttcgagatggtgcagctccccgtcgcggccggcgactgcgaggacgacgaagacgacgacgacggcgacgaggcccgcaccgcgcggctggaggaggagaacctgaccctgcgcgagcggctgttcctgatggagcgcgacatggacgacctccgccgccgcctcctcgccgtggaaaccctctgccgcgaccgccaccgcgacggctgcgtggtggacgctgccggcgtcgtcgccgaggagacggtgctctccgagagcgtcgccggcgccgacctcgccggagtcggagacgacgacggtgacacggcggcggacgccatgaaagcgtgaagcagacaagggcttgtactactcaactgtacataggtttccgggtttcccctgtgcagatgttgatgtgaagagtaggcagaagcagctttagcttagaaattactcttcttctttgcatccttcctgtggtttaatcttgatttttgttattacttgtttagcagcagcttgatcatctctttgtagtactagttcggttccatttcttcttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0553700, RefSeq:Os09g0553700