Os10g0504200

From RiceWiki
Revision as of 21:11, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0504200

Description

Cytochrome b561 family protein

Version

NM_001071537.1 GI:115482817 GeneID:4349055

Length

2448 bp

Definition

Oryza sativa Japonica Group Os10g0504200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19712899..19715346

Sequence Coding Region

19713073..19713381,19714108..19714307,19714435..19714483,19715133..19715267

Expression

GEO Profiles:Os10g0504200

Genome Context

<gbrowseImage1> name=NC_008403:19712899..19715346 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19712899..19715346 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtggcggcgccggcgaaggcggcgcacgcgctggcggccgccgcggcggggatggtgctcctgtggtgcgtgcactttcgcggcggcctcgcgctcagctcccccaccaacaagggcctcatcttcaacgttcatcctgtgcttatgctgatcgggttcatcattctaggaagtgaagccataatgggctacaaaatatggccatggggccatgacacaaataagatggtccatttgcttcttcatgctattgcacttttgctgggttcagttggaatatatgctgccttcaagtttcacaatgaaagtggaattgctaacctctacagcctgcactcctgggttggacttggaactatctgtttatatggtgtacagtggatatttggcttcgtcaccttcttcttccccggcgcttcgccgtcgctccgacgcgccgcgctcccatggcacgtccgctcgggccttctcgtctacatattagcgttgctcgcggcggagctggggttcctggagaagctcaccttccttgaggccggagggctcggcaggtacagctcggaggccctgcttgtgaacttcaccgccgtgctcgtcatactgctgggctcagccgtcgtgatgtatgttactgctccgatgcacaatgaacattctcatgggtattcagcagtgcgcaagccatga</cdnaseq>

Protein Sequence

<aaseq>MAVAAPAKAAHALAAAAAGMVLLWCVHFRGGLALSSPTNKGLIF NVHPVLMLIGFIILGSEAIMGYKIWPWGHDTNKMVHLLLHAIALLLGSVGIYAAFKFH NESGIANLYSLHSWVGLGTICLYGVQWIFGFVTFFFPGASPSLRRAALPWHVRSGLLV YILALLAAELGFLEKLTFLEAGGLGRYSSEALLVNFTAVLVILLGSAVVMYVTAPMHN EHSHGYSAVRKP</aaseq>

Gene Sequence

<dnaseqindica>1966..2274#1040..1239#864..912#80..214#gacgctgcgacgaaccggagaaggattttcttccgatctcgcttccacctcgccgcctcgccggggaggaggagggtcgatggccgtggcggcgccggcgaaggcggcgcacgcgctggcggccgccgcggcggggatggtgctcctgtggtgcgtgcactttcgcggcggcctcgcgctcagctcccccaccaacaagggcctcatcttcaacgtaagaatcgctcgccccccaccttttcagctgatgggtcgtggatgttgccattgttgttggggagattctcctgtccttagctgtgctggatctttaactcaactgccgtgaacgattgcaacattgtggttagtactgttttactctaaactgcaggctagttgaccattctggttaatggcggcgtcatttgatttggttgcaagcctatagcactgtactgtgctagttcttgtgttatttgtctccaagaatgaacttgataatgctatgtgtacaagagagtagagacctgtattgtttggtgtttgcgctggtatttctactttgctgtgtatattgtgtagtccatgaagaaatgtaaatctccatttgaccacttgggcctgttctgaagatggattgctgggttaccgaaggtttagttttgtgtaaggatttgtgctgaaggtcatttttggaggttaaatccttattagaaattttaggataatgactgagtgactgacaaggcttatatttcggaggggataatatttgaagattgattgtaaaatggtctggtttacttttttaattgcgctctcagagtattacatatggcccatttgctaaaaaaattggttttctgatccctgttatgcaggttcatcctgtgcttatgctgatcgggttcatcattctaggaagtgaaggtcaggacaaaaaaaaactcattcttttttctcctttgatggttttgccatgatgagtattaaaacaatactcactatgctattatttttgcaaagttctcaccgatctattgcgatttgtttgcagccataatgggctacaaaatatggccatggggccatgacacaaataagatggtccatttgcttcttcatgctattgcacttttgctgggttcagttggaatatatgctgccttcaagtttcacaatgaaagtggaattgctaacctctacagcctgcactcctgggttggacttggaactatctgtttatatggtgtacaggtaatttgagcaaagcatttatcattctaatgttgtctgaattgagatttaaggtttggaactatgttagagctttttaaatttatttattgcatcggtagccatgcaagcatgattgccatagctatactactgaatgcctcaaaagagcttccactagattataatagcttggacaagttaactatctgaacccagattagctatttgcaacattccaaatgccactttaagtagtggttttgcctttgtgaagaaaagtgtaaaggaaaagtcatgtaatttgctatgttacatctgtctgtaaaggaaaagtgtctgtaggatattgttgaagcatcaaagcagagagaatcatgcttcattcgacatgatttaggccacaaaccaatagaggaatttaagaatatgtagcataaacctactatgataactcaagaaaatagatgccgatattcctgaattaatcttttccctcccttggcattaccgagtgacatcaaggtatcagctccttgttattaaatattgtgttaggtctcctgattgttgagaactttacaagatgatatcaactaatgaaacatatgtcaataatattttctttgaattcattgttctgaaacttgctcatagtccgtttgctattactcttttgtgtgaccctttccctatattcagaattacctgaaacctgattgtcctaaccccatgttgatattgcagtggatatttggcttcgtcaccttcttcttccccggcgcttcgccgtcgctccgacgcgccgcgctcccatggcacgtccgctcgggccttctcgtctacatattagcgttgctcgcggcggagctggggttcctggagaagctcaccttccttgaggccggagggctcggcaggtacagctcggaggccctgcttgtgaacttcaccgccgtgctcgtcatactgctgggctcagccgtcgtgatgtatgttactgctccgatgcacaatgaacattctcatgggtattcagcagtgcgcaagccatgagccagatgagccattgatcgatccagcttcttcatcggctgtgtctgttgtataattgttttgctgaattattcccatagctgctgcctgctgcaaatgtggttcagatctatgggcatgtgatgtaactttgtaagtaactgacgatattaattacgagatgcgaaaattttg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0504200, RefSeq:Os10g0504200