Os05g0516300

From RiceWiki
Revision as of 10:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0516300| Description = Conserved hypothetical protein| Version = NM_001062579.1 GI:115464888 GeneID:4339320| Length = 2532 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0516300

Description

Conserved hypothetical protein

Version

NM_001062579.1 GI:115464888 GeneID:4339320

Length

2532 bp

Definition

Oryza sativa Japonica Group Os05g0516300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25669527..25672058

Sequence Coding Region

25669576..25670055,25670740..25670742

Expression

GEO Profiles:Os05g0516300

Genome Context

<gbrowseImage1> name=NC_008398:25669527..25672058 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25669527..25672058 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggccgggagccatggccgccgccgccgcgaagctcccgcgcctcaccacctccgccgcgctcttcccgaccccgaggccgttcggctcccccaggcccgccaaagccaggccgatgccgccgccgccgcccatcaccatctccatggaccctgccgccgtcgacccggcccacctccaggcgctcatgctcgcctgcgcacactcctgcgccatccgcccctcgccgccctccgccgcggaggaccccgtcgacctccgcaagctccgcgtcgcgctcgcgcacagcttcctcgtcgtgtccgtcttctgcagcgcgaggttcctggacgatggggatgggggtgtcgatggcgatggccggcggcggctgctgggcctggggctcgggctcgggcggcgagaggaccggcggctcgtcggatttggccgggccgtctccgacgtcgggctcaccgcgtccgtccacgacgtcgtgtga</cdnaseq>

Protein Sequence

<aaseq>MRPGAMAAAAAKLPRLTTSAALFPTPRPFGSPRPAKARPMPPPP PITISMDPAAVDPAHLQALMLACAHSCAIRPSPPSAAEDPVDLRKLRVALAHSFLVVS VFCSARFLDDGDGGVDGDGRRRLLGLGLGLGRREDRRLVGFGRAVSDVGLTASVHDVV </aaseq>

Gene Sequence

<dnaseqindica>50..529#1214..1216#gatttttccacatactgctcgcacgttgctcgtgcttcgctcgccgccgatgaggccgggagccatggccgccgccgccgcgaagctcccgcgcctcaccacctccgccgcgctcttcccgaccccgaggccgttcggctcccccaggcccgccaaagccaggccgatgccgccgccgccgcccatcaccatctccatggaccctgccgccgtcgacccggcccacctccaggcgctcatgctcgcctgcgcacactcctgcgccatccgcccctcgccgccctccgccgcggaggaccccgtcgacctccgcaagctccgcgtcgcgctcgcgcacagcttcctcgtcgtgtccgtcttctgcagcgcgaggttcctggacgatggggatgggggtgtcgatggcgatggccggcggcggctgctgggcctggggctcgggctcgggcggcgagaggaccggcggctcgtcggatttggccgggccgtctccgacgtcgggctcaccgcgtccgtccacgacgtcgtggtataattttttcctttcttgtgatctcaaatgggcgatgaggtaattgttcctgatggaattctgggatgcagcaattagtttgatccgtatggatacctatgagtatgagcatgggtggtagtgtagtagatcgatttcaatattgattccatctagcaaccaaacactgactaaaaattcaaagtttgttgcaagaaactagagcactctcacagtgtacttctgagagagcaattttatctgcagtaggaatgctgagtgaaaaacaaaccacagaaggcaacatttcaacattggcggtgcagccgtgtgtatttcttgcgaccctaatacgtgaattgtctgttatgttatccaaaatagaaaagaaaaactcaaagaacattgtgcatgtgaaaaagaaatgcaataactgaaagtaaaattttttgtgcactaatatagttgatgtacgttcaaacattttcttcacagcactaggtgcaactgaaatgattgggagggtacttgggccatcaaaatgatgtgcatacctgaactgagtacagtctgttagtctatctacaatctactgataacttactttgatgtgtcctacttatattattttcctgaatcctgaacattgaacaaaaggttgtcgacctattgaattgcatctgttcatatgactttcttcagtgactaacaggtacatccgtcactacagaggagaggtataggccgacaaattgttgagagaatgacaaggtaatgtattatctccagtgttttcagtgatagtatttgaaagggggttccttgtgtcactttatttcattagaggaaaaaagcagcatacatgacattgtacataaattatgccagccagcaaaaccacagcataaacacttctatagacattctcaatggatgccttgcaactgaaaatcgaagtcttgttgtacataaacaagaaaaaaataaagttcctttttgcaatctgttagttgatgaattcttcccagaatgttctctattgttattccaaaattgattcgtacttgcttggattgatcacttatcttgggagtatgtaagaagcaagtataatttgcacacagattattaactaggcttttttaactgtcttagtttttggtatacaaagtccccttgccttgtacgtccttaatgccacagtcaaaaccaagttactgatggtatcttgatcaagtgatcttaggtcaacgacgcaataaatctatttgaagtagagaacttgttgagtgcatcaggttgatccaatgttcaaatttcatttactcatcttatctgtcacaatttctgcagagtactccataacagaggtatatttgacatttccgcactatgtacagaaaaggagaggtattgccttcctgtctaatctggcacacctcatgtgaatccgtgttcttgtcgaatatactatatgatggaagtgtgatgatatactttgacatatgcgctgcaatatatattcactggtatatgatgagtttatcattccctggtgctaatggcaggcccttttttgaagcatgtggatttggggacgatgcaatgggttcaacaacaatgatgtacacgggaaagatgcacagatagtacacaatgataattgtctcaaggaagatattgacagctcctctggtgggttaacagttgctgcttgaatatatcactgccagtaaaggaacagcagccggagtaaattatgcaatcctttctagctggttagaagagaaaataaccagaaggatatggcaaaactcatagcatactagtatttgtgaaggatagcagtacataccatgtttgataccccagaccagcatctgtatactctaccactgattgtaaaaactttgagatgagtgctaagatttcatttacaaacaaagaatgaaggaaggaaacaaatacatcaaacaagttattgaatctgcagtggaaatagcaattatccttcaaggctt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0516300, RefSeq:Os05g0516300