Os05g0516400
| Gene Name |
Os05g0516400 |
|---|---|
| Description |
Similar to Hydroxyproline-rich glycoprotein DZ-HRGP precursor |
| Version |
NM_001187560.1 GI:297724250 GeneID:9271877 |
| Length |
5748 bp |
| Definition |
Oryza sativa Japonica Group Os05g0516400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:25674250..25679997 |
| Sequence Coding Region |
25674252..25674957,25675075..25675497,25676225..25676719,25677043..25677129,25677226..25677296 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:25674250..25679997 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:25674250..25679997 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>cgtcgcgaggattttcagaggccaacccaaccaaacaaacaacctccaaaaaccatcccccgggattatctccgcgatctcctcttctcccccgccgccgctgctttgcggttgcacccgcccatgtccgcgccgccgccgccgccgcctaatgctagcactcctgctcctgcaccgccgttgcctccgtctcttggtgcacccgacccgccgccaccaccaccacctgtgatgccatctcgtccgccgccggctgctccgcctccctcgccaccggcagcgtctcctcctcctcctcctgctccaccggtggcgccgcggccaactccgtcgcctcctcctcctccaccggtgatgccgtcgaagccagtgaaacctgtaccgccttcgtcgcctcctcctcctccggtgatgcagccgccgtcgccatctccaccactaataccgccgccgccgccgcctactccggtgatgccggtgctaccaccgacgccgtccccgccttcaccggtgaatccaccaccgccatcgccgtccccgccgccttctccggtgaacccactgccgccaataacgtcaccaccttccccggtgtcaccaccttctccggcaaatccactgccgcctgcgacgtcaccaccttctccggcgaacccactgccgcctgcgacgtcaccaccttctccggcgaatccactgccgccgacgacgtcaccgccttctccagcgccgcctccaacggtgccttcccaaccaccggaggctgcaccggcgccgacgacgaagccaccaccaaccccgctcccaccagctcgatcgccgccagcgccatctccagcttcccgcgaaccgtctccctcgccgtcgccgtcagtagcaccaccgtctcttccaatcttcaccccgtcaccccccggtggtggccgcggcgccgccactccttcgccgccgtcgtcgcggccgtcgcctagatctccgccgccgccgtcctccgccccgcaaggagtgatgatcgccatcgtcgcggccatcgtggcgttgctcgtgctcggcgcagtcgccgccgggctgctgtgcttctgctcgcgccgccgtcgccgccgccgccgccgccaaccaacatcgccgggtgatttcctcggacccttaccggtgacatcgcgtcatcaccagcaatcacaattcatcaagccaacagtaacatacccaccacagctgaatgcacactcgccgctgcaaagcagcagcaactccgacccaccgtcaccgctgctgcaaccgtctccacctccaccggcggcgagcggcggcacggtgtcgtacggcgacctggtggcggcgacgaacggcttctccgagggcaacctgctcggggagggcgggttcgggcacgtgtaccgcggcgagctgctcctgcacgacggccggaggcagccggtggccatcaagaagctccggccggggagccggcagggcgagcgcgagttccgcgccgaggtggacatcatcagccgcatccaccaccgcaacctcgtctccctcgtgggctactgcatccacgccgaccaccgcctcctcgtctacgagttcgtccccaacaagacgctggacttccacctccacgggagcagccggccgacgctggattggccacagaggtggatgatcgccgtcgggtcggccaaggggttggcctacctgcacgaagactgtcgtccaaagattattcaccgagacatcaaggcagccaacatccttctcgattacaaattcgagccaaaggttgcggactttgggctagccaagatccaaccgggagacgacacacacgtttccacccgcgtgatgggcaccttcggctacttggcgccggagtatgctgctactggcaaagtaaacgacagatcagacgtcttctccttcggtgtcgttcttctggagctgatcaccgggaagaggcctgtcatttcgactgagcccttcaacgacgagactctggtttcttgggcaaggcctcagctgacaaaagctctagagcagcatgtctacgacgatctgatcgatccaaagcttgacgccttgtacgacgcccacgacatgcatcggctgatctcctgcgctgccgccgcggtgcggcacacggcacgctcccgccctcgcatgacccagattgtgagatacttggagggggagctgtcaatagatgacctgaacgccggcgtcgcaccggggcagagctcgctgcgctcgcaggagcactccggcgacatgacggagctggtgcggcggcggctcaggagggtcgcgttcccgccgggcagcggcgtcaccgtcaccggcaccggcgccgtcaccgacagcggctacctgagcgaggcgacgagcgagtacggggtgaacccatccatcagctcgagcagcggcggcgacgacgacgacacggccggcgaggtggtcggcggcgtcaccgccaccagccggccgcacgccgccgccgccgcgtccagcccggacacgtccgaggtggcgtcaccgcacgccggcgagctcgccgccgacgccgccaagccgatgagcagacgaacacgcctcggccgctttccgtga</cdnaseq> |
| Protein Sequence |
<aaseq>RREDFQRPTQPNKQPPKTIPRDYLRDLLFSPAAAALRLHPPMSA PPPPPPNASTPAPAPPLPPSLGAPDPPPPPPPVMPSRPPPAAPPPSPPAASPPPPPAP PVAPRPTPSPPPPPPVMPSKPVKPVPPSSPPPPPVMQPPSPSPPLIPPPPPPTPVMPV LPPTPSPPSPVNPPPPSPSPPPSPVNPLPPITSPPSPVSPPSPANPLPPATSPPSPAN PLPPATSPPSPANPLPPTTSPPSPAPPPTVPSQPPEAAPAPTTKPPPTPLPPARSPPA PSPASREPSPSPSPSVAPPSLPIFTPSPPGGGRGAATPSPPSSRPSPRSPPPPSSAPQ GVMIAIVAAIVALLVLGAVAAGLLCFCSRRRRRRRRRQPTSPGDFLGPLPVTSRHHQQ SQFIKPTVTYPPQLNAHSPLQSSSNSDPPSPLLQPSPPPPAASGGTVSYGDLVAATNG FSEGNLLGEGGFGHVYRGELLLHDGRRQPVAIKKLRPGSRQGEREFRAEVDIISRIHH RNLVSLVGYCIHADHRLLVYEFVPNKTLDFHLHGSSRPTLDWPQRWMIAVGSAKGLAY LHEDCRPKIIHRDIKAANILLDYKFEPKVADFGLAKIQPGDDTHVSTRVMGTFGYLAP EYAATGKVNDRSDVFSFGVVLLELITGKRPVISTEPFNDETLVSWARPQLTKALEQHV YDDLIDPKLDALYDAHDMHRLISCAAAAVRHTARSRPRMTQIVRYLEGELSIDDLNAG VAPGQSSLRSQEHSGDMTELVRRRLRRVAFPPGSGVTVTGTGAVTDSGYLSEATSEYG VNPSISSSSGGDDDDTAGEVVGGVTATSRPHAAAAASSPDTSEVASPHAGELAADAAK PMSRRTRLGRFP</aaseq> |
| Gene Sequence |
<dnaseqindica>3..708#826..1248#1976..2470#2794..2880#2977..3047#3150..3226#3488..3635#4278..4439#4850..5287#cgcgtcgcgaggattttcagaggccaacccaaccaaacaaacaacctccaaaaaccatcccccgggattatctccgcgatctcctcttctcccccgccgccgctgctttgcggttgcacccgcccatgtccgcgccgccgccgccgccgcctaatgctagcactcctgctcctgcaccgccgttgcctccgtctcttggtgcacccgacccgccgccaccaccaccacctgtgatgccatctcgtccgccgccggctgctccgcctccctcgccaccggcagcgtctcctcctcctcctcctgctccaccggtggcgccgcggccaactccgtcgcctcctcctcctccaccggtgatgccgtcgaagccagtgaaacctgtaccgccttcgtcgcctcctcctcctccggtgatgcagccgccgtcgccatctccaccactaataccgccgccgccgccgcctactccggtgatgccggtgctaccaccgacgccgtccccgccttcaccggtgaatccaccaccgccatcgccgtccccgccgccttctccggtgaacccactgccgccaataacgtcaccaccttccccggtgtcaccaccttctccggcaaatccactgccgcctgcgacgtcaccaccttctccggcgaacccactgccgcctgcgacgtcaccaccttctccggcgaatccactgccgccgacgacgtcaccaccttctccggcgaatccattgccgccgacgacgtcaccaccttccccggcgaatccactaccgccaacgacgtcacctccttctccggcgaatccactaccaccagcgacgtcaccgccttctccagcgccgcctccaacggtgccttcccaaccaccggaggctgcaccggcgccgacgacgaagccaccaccaaccccgctcccaccagctcgatcgccgccagcgccatctccagcttcccgcgaaccgtctccctcgccgtcgccgtcagtagcaccaccgtctcttccaatcttcaccccgtcaccccccggtggtggccgcggcgccgccactccttcgccgccgtcgtcgcggccgtcgcctagatctccgccgccgccgtcctccgccccgcaaggagtgatgatcgccatcgtcgcggccatcgtggcgttgctcgtgctcggcgcagtcgccgccgggctgctgtgcttctgctcgcgccgccgtcgccgccgccgccgccgccaaccaacatcgccgggtatgtgttcgaccgctcactttacaccactaacctggccggtgcaacgccggtgcagcaccggccggccaccggcgtgtcgcgcggacacgggtttgcattagcgcaagtcgtcggctcttcgccgccgccgcgcggttacgacgcatcgcgcacgcgcgcgcgcactttcgccatgtcgcgtcgtgcgcggtggtgacgtcacggaggcaaatggtgaccgtgacacgtggtcgtaaagttggatgcaccaaacggcttggggatatggagggacgatggacgtgttgctcttgcacaattcgatcaaacttgagcttttcttcaagttagttagtggacggaccgtgtagacgaagttggatgcaatcgagtactccctccgtcccaaaaaaaaaactcacttatatcctttgtgtaaatttgttatactaaagttaggttaaatttttttatggagggagtatacacaaagtggtttagagggttttaaagttagtgtgttctggattgaaaatttcttgaagttaacaaatacttcatctttcacaaaatataataacctactacaatagattaatgaacgtgttcagatttgtagtagtagaaaatatctcatccgattctaagtagattcagaagtaaaattagctcatacactactttatttctgcatgaaattcttaacatctcttatggaacatttaccattgtgtcaccttaccaggtgatttcctcggacccttaccggtgacatcgcgtcatcaccagcaatcacaattcatcaagccaacagtaacatacccaccacagctgaatgcacactcgccgctgcaaagcagcagcaactccgacccaccgtcaccgctgctgcaaccgtctccacctccaccggcggcgagcggcggcacggtgtcgtacggcgacctggtggcggcgacgaacggcttctccgagggcaacctgctcggggagggcgggttcgggcacgtgtaccgcggcgagctgctcctgcacgacggccggaggcagccggtggccatcaagaagctccggccggggagccggcagggcgagcgcgagttccgcgccgaggtggacatcatcagccgcatccaccaccgcaacctcgtctccctcgtgggctactgcatccacgccgaccaccgcctcctcgtctacgagttcgtccccaacaagacgctggacttccacctccacggtactttctactctctctcagtttcatattatatgtcattttaattttttttcttagtccaacctttctaagtttgattaaatttatataaaaatatagtaacaactatcacatcaatttagtttcactggatgtatatattctgatactacgtttgttttgtgttaaaaatattgctcaaacctaaaaaaaattgacttgaaaaaagtcaaagtgatttataatataaaaataaaaggagtactgcacttctcgttttttaattttcgcgttgtctgcgccattcacgaaatgagagcttcttctcttcttctccggtgcagggagcagccggccgacgctggattggccacagaggtggatgatcgccgtcgggtcggccaaggggttggcctacctgcacgaagactgtaagttacttgtttttttcttctctctatcttggtctgaaattttcaagattttttctttgatttaaattcatgttgattgttgattgacttcaggtcgtccaaagattattcaccgagacatcaaggcagccaacatccttctcgattacaaattcgagccaaaggtaaacgaaggatgagatcattatcagtcacaccggccggcaagaagattaccacaaaacaattgctatatttcagaacgagcatttttgctgtgcatgcaggttgcggactttgggctagccaagatccaaccgggagacgacacacacgtttccacccgcgtgatgggcaccttcgggtaacacattcttagcgtgaccctattttttatttttaagataatggaatgaaacaacgtgattgatcaaagagatacaaccaattattatagaattcacacaaaaaaaaccccacacaaagttcacattgtgtttgtgtttgtgtttcacgagagtttagaatagtttatctgatgtgatggaaatacttcaagaagttataaggggacatcctgtactgttgatgcaatcgacgcttgtttattttttctttctttcagctacttggcgccggagtatgctgctactggcaaagtaaacgacagatcagacgtcttctccttcggtgtcgttcttctggagctgatcaccgggaagaggcctgtcatttcgactgagcccttcaacgacgagactctggtttcttgggtatgtataccatgcatgaatctctatggttctttcagtggttcagtttagtccagccatccatagttagtgttacaacttacaaataaagaacttggcggtactatgcatgaaaaacattgcaattttcatagcatttttgcatagtgacaactgagaagcagttgtcatgctaatctgggccggagctataacaaaatggagggtgatggcacttgtttaatttactctattttagattgagtttaagttgatacaggtgtctaagtttgtattgaagggggtgcatggtgaaaataaataaggtatagctaaacatttttcttgcatgggttcctgtacacccccgtaatatactctcgctccgcccccgcctggctatgactttaaaaaacttttagacatgatactttgtcgaaacttaacccctgcaggtccacttcttgctatcagattttcaacagactagtacagtgtcatagtacaatccaattctgacttctgacttcattttttaaaaaatatatatatattgtggattcagtgacagcatcgcgttacatctcgttaactaatggctgattattctgtaactgtaaggactactaaatttgttcttcttttatgttttggacgatgcaggcaaggcctcagctgacaaaagctctagagcagcatgtctacgacgatctgatcgatccaaagcttgacgccttgtacgacgcccacgacatgcatcggctgatctcctgcgctgccgccgcggtgcggcacacggcacgctcccgccctcgcatgacccaggtgagcctcccttggagaagaataaaatgtcatggtgttacatatcaactaaaatggttattatttttttttaaaaaaataattagatagaattgatatatgatatattacttcatcaatatataaattaaaattttgacttctacaagttgtaataaaaacaataacttgtgaagtcgaattggattgatatatctcatgccaatctattttatcattttctttaattatttttatataattatttagttgatatataataaaaaggtggatatggatatttaattattagaattatctccctgctgtgcaatgcaacttgcgaaacgaccaaagaaacaagtttctcttattgactttttgcccaaaaacctgagttctttttttctgttcttgcaatggacgagcagattgtgagatacttggagggggagctgtcaatagatgacctgaacgccggcgtcgcaccggggcagagctcgctgcgctcgcaggagcactccggcgacatgacggagctggtgcggcggcggctcaggagggtcgcgttcccgccgggcagcggcgtcaccgtcaccggcaccggcgccgtcaccgacagcggctacctgagcgaggcgacgagcgagtacggggtgaacccatccatcagctcgagcagcggcggcgacgacgacgacacggccggcgaggtggtcggcggcgtcaccgccaccagccggccgcacgccgccgccgccgcgtccagcccggacacgtccgaggtggcgtcaccgcacgccggcgagctcgccgccgacgccgccaagccgatgagcagacgaacacgcctcggccgctttccgtgagcgcactggatctctctttttcaccggtggtaagtggtataattgtacatgcgtaaaagtggctaatagtggatgaatttttcagctcattttttcttcggttttagcaaggttttgtctgaatttattgtcgcgattaatttcgcactaagggcctgttcattttatcaaattttggcaatactaaattttggcaactatgccaaaatttgataaggttgaaaatgacatcaaagtgaacaggccctaaacgaaaagagagcaaagttggattagcagtcaacgtgaaccacatgggacggatcagtgatgagtgagctgtacagaactttcatgtttcttccatttgttaggttgtcaatacacctgtccttgagaagatgccatgtggataattatcatccacgcctctgctatcagtcactatcattggtcatgcaacacaagcgtacgatccaatc</dnaseqindica> 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| External Link(s) |
