Os05g0516600

From RiceWiki
Revision as of 10:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0516600| Description = Small GTP binding protein| Version = NM_001062581.1 GI:115464892 GeneID:4339322| Length = 2726 bp| Definition = Ory...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0516600

Description

Small GTP binding protein

Version

NM_001062581.1 GI:115464892 GeneID:4339322

Length

2726 bp

Definition

Oryza sativa Japonica Group Os05g0516600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25681790..25684515

Sequence Coding Region

25681918..25681970,25682073..25682099,25682228..25682327,25683289..25683435,25683506..25683586
,25683694..25683839,25684153..25684219

Expression

GEO Profiles:Os05g0516600

Genome Context

<gbrowseImage1> name=NC_008398:25681790..25684515 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25681790..25684515 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcgcgccgccgcaccctcctcaaggtcatcatcctcggcgacagcggggttgggaagacgtccctgatgaaccaatatgtgaacaagaagttcagcaaccagtacaaggctacgattggcgcggatttcctcaccaaggaggttcagttcgaggataggctcttcactttgcaaatatgggatactgctggccaggaaaggtttcagagtcttggtgttgcattctaccgtggagcagattgctgtgttctagtttatgatgtcaattctatgaagtcatttgataatcttaacaactggcgtgaagaatttctaattcaggcaagcccatcagaccctgataacttcccttttgttcttttgggcaacaaagttgatgtagacggtggcaacagccgtgtggtctctgagaagaaggcaaaggcatggtgtgcctctaaagggaatatcccatactttgagacatctgccaaggatggtacaaacgtggaggaggctttccagtgcattgtaaagaatgctctgaagaatgaaccagaggaagaactgtatgtgccggacaccgtggatgtggtgggtggcaaccgggcccaaagatcatcaggctgctgctag</cdnaseq>

Protein Sequence

<aaseq>MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGAD FLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNW REEFLIQASPSDPDNFPFVLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAK DGTNVEEAFQCIVKNALKNEPEEELYVPDTVDVVGGNRAQRSSGCC</aaseq>

Gene Sequence

<dnaseqindica>129..181#284..310#439..538#1500..1646#1717..1797#1905..2050#2364..2430#aagcaaagcaaacgcgacagcttcgcctcgtctctcccccccgagtccccaacccctcctcctcctcctcttccccttccccgcgccgcggcgagatcgctccccccgggggcagcagctagatcccgatggcttcgcgccgccgcaccctcctcaaggtcatcatcctcggcgacagcgggtgagcgattcggatctcccccccacctccccatctcagtccgcggccgtttttttttcttgggcttcggtttatcgctgacttggtttcgttgcgatctagggttgggaagacgtccctgatgaaccagtatccttcgattcggataggggatggcggatgatatagcccgcgtcgtttcacgaacacgggcgggtttttttttcttcttcgatttatttgggggttttgttttcttgagctgtgatttaattcagatatgtgaacaagaagttcagcaaccagtacaaggctacgattggcgcggatttcctcaccaaggaggttcagttcgaggataggctcttcactttgcaagtaagatatttcttttcccccgcactggttcttctcctcatcgcgccgagattaattaggtccgttcatgggaagcgaatttgtatgagcttgattagttacttaactgctccactccgagctcaatgtagagaagatgtttctagctgtttacttctgaaatgtttgtttgtacatgcatcattgacttgaagtttgcacgactgattgagtctcaatatggtctataactctaaactctacggttttggtttatttagatgttgtgatttaaattttcaagatcgaattgcgtggcattaattgattgaacaatgagcaggcaccttttccattaatttcgtggtttcatggattgattgaagtacttgaatttagtcttttttgcttatgtaaattggtattttggctggaaacaatgtacaaccagttattttgcatgatggaaataatggcaggaaaagttattgtcattttaagaatttattcactttatgctttgtcagagaatagaaatcaagtgccagcctagttcctactttcttctgtccgatactttgcaaggttataaaaagtacttccgttatgtcttttggaattaccacacatgtttttgtgccccaagcctgctctttaccaatcctaaagctcttgctcctgcttaagtaacaaactacatcattttcagattagttctgcgtattctaatggactaaacatctcttctaggtacctactgcatgtttatgttgcttcttatctctatttagagcatgtctattgtatgcataagaaatctatttgtcaagtttttctgatttcacattctgttttatttgaagtctatgcatgccccagtctgatgtgttagatgtacggctgtcatgcatacaaataaattgggaggatcaccatctcttatttgctggtttattttgctgaaccgtgtattttgttgcagatatgggatactgctggccaggaaaggtttcagagtcttggtgttgcattctaccgtggagcagattgctgtgttctagtttatgatgtcaattctatgaagtcatttgataatcttaacaactggcgtgaagaatttctaattcaggtaatgtgttttctataattagtcatgaatcatgtcatttctgtctcactttggatgtttgactttacaggcaagcccatcagaccctgataacttcccttttgttcttttgggcaacaaagttgatgtagacggtggcaacagccgtgtggtaattatcgttccttcttcagctttctaacagaagttccttttaatcagattccatatcttctctcggtggctgatatggatacgccaaactggataatattttaggtctctgagaagaaggcaaaggcatggtgtgcctctaaagggaatatcccatactttgagacatctgccaaggatggtacaaacgtggaggaggctttccagtgcattgtaaagaatgctctgaagaatgaaccagaggaagaactgtaagcacactctctccttactctctttgatcttttgtaaagatttaacaacctttattgcaattggtggttgatcatttgatctacctgaaagtgcaatagttctttcagttggccattgcttcaatcattatgtacattaaatagtcaatagcgagttgcttttgttttttagacacaatgcactgtttctgtttcatggtaccgtcttctctttgcatggtcatgggactggcttagcatcaccacacatctacatttggttatatttctgccggtttttgttttttgatatcacgaaatgctcttgaaggtatgtgccggacaccgtggatgtggtgggtggcaaccgggcccaaagatcatcaggctgctgctagaacatgatggaccatgagggctgagactgttggctatgcggtaacagaactacctttggacattgctgtgcctccatggtgactctcaaggacccattcgtaaccttttcaatcacctcatgtacccagttaagattgatgcgtctggcctgagttgtcaaatttgtggatgttgtgcagtttatcagtagcgtcatatctttgtgaatacaatcggtgaaataagtcgagtgtaaactgaagtttctccattatggttctctctgaaacgaacaagatgaatttgttttgtctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0516600, RefSeq:Os05g0516600