Os05g0517500

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Revision as of 10:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0517500| Description = Similar to Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH)| Version ...")
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Gene Name

Os05g0517500

Description

Similar to Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH)

Version

NM_001062587.1 GI:115464904 GeneID:4339329

Length

4367 bp

Definition

Oryza sativa Japonica Group Os05g0517500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25714533..25718899

Sequence Coding Region

25714796..25714829,25714916..25715008,25715658..25715746,25716150..25716212,25716482..25716571
,25716751..25716811,25717046..25717140,25717408..25717497,25717683..25717769
,25718539..25718850

Expression

GEO Profiles:Os05g0517500

Genome Context

<gbrowseImage1> name=NC_008398:25714533..25718899 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25714533..25718899 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttctcctcctccccatcgcctgctcctcctcctcgcggtcgccgccgtgctccaccgctcggcggcggcggcggagggggtcatccggctgccgagggggagggcgtgtgcggcgccgacggaccccgcggcgtacgaccggccggtgatcggcatcgtgtcgcacccgggggacggcgcgggcgggagggtcagcaacggcacggccgcctcctacatcgccgcctcctacgtcaagttcgtcgagtccgccggggcgcgcgtcgtcccgctcatctacaacgagcccgaggagcgcctcctcgagaaactgagtttggttaacggtgttctgtttactggtggttcggtgaagagtggcccatattttgagaccataaagaaagtgtttcagtatgtcttggacaagaatgatgcagggattccatttccactttttgcacagtgtcttggttttgagcttgtaagcatgattgtcagcaaggacaataatatcttggagtcattcagtgccacaaatcaagcatctactcttcaatttcccaattactcttcacttgagggatcagtatttgaaagatttgatcctgatctcatcaagaaactaagcaccagttgtcttgtgatgcaaaaccacaaatatggtatatcacccaagacattgcgagagaatgttgccttatcaagtttcttcaagattctgacaacctcacctgatgaaaatggcgaggtctatgtctcaaccgtgcaagcaaacaaatatcctatcacatgcactcagtggcatcctgagaaagctatttttgagtttggtaaacaaatgattccacacagcgaggaggcagtacaagtgacacaaaattttgccaactattttatcagccaagcccgcaagtcccagaacagacctcccgcagacaaggtgttggacaacctgatttacaactacagccctacgtttattgggaaaaaatcgaaatcgttcgacgtggtctacatcttctcctaa</cdnaseq>

Protein Sequence

<aaseq>MGSPPPHRLLLLLAVAAVLHRSAAAAEGVIRLPRGRACAAPTDP AAYDRPVIGIVSHPGDGAGGRVSNGTAASYIAASYVKFVESAGARVVPLIYNEPEERL LEKLSLVNGVLFTGGSVKSGPYFETIKKVFQYVLDKNDAGIPFPLFAQCLGFELVSMI VSKDNNILESFSATNQASTLQFPNYSSLEGSVFERFDPDLIKKLSTSCLVMQNHKYGI SPKTLRENVALSSFFKILTTSPDENGEVYVSTVQANKYPITCTQWHPEKAIFEFGKQM IPHSEEAVQVTQNFANYFISQARKSQNRPPADKVLDNLIYNYSPTFIGKKSKSFDVVY IFS</aaseq>

Gene Sequence

<dnaseqindica>4071..4104#3892..3984#3154..3242#2688..2750#2329..2418#2089..2149#1760..1854#1403..1492#1131..1217#50..361#acatctcgcgtcgcgtgagacgcactcctcacgcacgggagcagcagcgatgggttctcctcctccccatcgcctgctcctcctcctcgcggtcgccgccgtgctccaccgctcggcggcggcggcggagggggtcatccggctgccgagggggagggcgtgtgcggcgccgacggaccccgcggcgtacgaccggccggtgatcggcatcgtgtcgcacccgggggacggcgcgggcgggagggtcagcaacggcacggccgcctcctacatcgccgcctcctacgtcaagttcgtcgagtccgccggggcgcgcgtcgtcccgctcatctacaacgagcccgaggagcgcctcctcgaggtccgtgagactccctcccttcccccctttctcccgttcttcgttccgcttccaaatgtgtgcgcgtggagtcgtgctatgttcgtcaattcgtcattgtctagaaaattcttcgtgatgtgttcgccactacattgcattcccctgcgttttgaagaattggtgctaatccattcaaatgggaaacaaacaggtgtagtgatcctctctaagcaactgccaaagtatattttaagtttatcagtgttaattattttataccattccatagattattccaaattgtcgaggaggcaaaactcttaaggcttgtgtctcgtaaaatgctatctgactgctcactatcattagtctcgctccttgtgttgagctggatgctgaaccagccggattgttttttagtttcttgtggtttttcttcagcctatcaggtcgtagttggttggaaacctcattgagcatggattgatatgtggatgcctgaactgtcaatatcaaatgtgaatttagctgaattgtttaaatacttggttatgccaattatttaggacgaacctttggaatcatttgggtacttcagatctgtctggaatagttggcctgtcatgttttaggttaccatacatctttgcttatcttttgcaaacacatcatctcctgaaataggccaattgtgaagtacttggtggccctgcttacatgctacttatgttttcttttttcatgaaataacttcctcatggttttgcttgtgcattttctacaacagaaactgagtttggttaacggtgttctgtttactggtggttcggtgaagagtggcccatattttgagaccataaagaaagtgtttcaggtaccttttgagcatcacgttctgattcatagctgatgcattcttctcttctattcttgttatttgtactataacatatcccatctgagtgccgcaacacaacttcattacatctaccttatttatcctaacccacacataatggaaggactaattgtagttttcgttgttttgttctcttttagtatgtcttggacaagaatgatgcagggattccatttccactttttgcacagtgtcttggttttgagcttgtaagcatgattgtcagcaaggtaatttcactccttttcggactctacacaacaaagagggggcgaggggactctggattgtttatagccttactaggttaaatagatgtcttgttgagggaaatggtcagttagatgttacagaaagaatcttttctaatgccttgtgtaaagaagtgaatcgatgactacagtattattttcctgaagaggccaagtatacttgtttctcatcccgcttttttgccaataaccagcaaataatatttcttattgctatgacattaggacaataatatcttggagtcattcagtgccacaaatcaagcatctactcttcaatttcccaattactcttcacttgagggatcagtatttgaaaggtatgtgttgaatgctaatgcaacctttcttgttattttttgatgggcacttggagatttcatactttattttgtcccatcttatataggttagtaatttctttttcacaagataaattgcaactgagtgtaatatatataggccattttggtgttctctgtccatgttattgctttggctaatctgtaattataatagtggaattaagtattgaacattatctaaattcacagatttgatcctgatctcatcaagaaactaagcaccagttgtcttgtgatgcaaaaccacaaagtgagtaaaatcctgcattctattttcaatttttttttaaatcaactccctgtgaaatcttaaacatgatatatatcatgggtggttattcagaataactctttctatgtagaataatcatccttactctctagtttgttaattttcctaacatggtttattttctcaactggtcaaagtatggtatatcacccaagacattgcgagagaatgttgccttatcaagtttcttcaagattctgacaacctcacctgatgaaaatggcgaggtacaaaatgtagtcgttttttattttatctcctgcatgaagaatatattaatgaaggtccttttgtctctcaagtaaatttatagttatcttttctttccttatcctgccacttaaatagtctgtatttatctaatctgattctgtggtggtattaagtggtataaaaggacaactgtcatctagatctccagtgttctgatctcgttgaaggatcaccagttcctttaaggtacaacaaactaatttcctttcatttggaaaatcaggtctatgtctcaaccgtgcaagcaaacaaatatcctatcacatgcactcagtggcatcctgaggtatgctgaccatagtgctactggttatgcttgaagtttgaatatttatctgctacccagttgacaggataagcccattttgcaatcatacttatcactatttgacatttgtggaactatttttagtctcttgtgctggaatggtgggtacccagagtagtgaagccacctaccaagtttgggtcttactctgttttaaacttgaagtgtatggcatttttgaatcactgttttatattttaacttgttccatctccaaaatatacaacatttctaaagattatgcattaatgtgctactcaatatttccttttataaatgttctcctctgtaatttatctgattctcagcacttgggtaaatgatgcctttttaccatgataagtttgtttgcatactgcagaaagctatttttgagtttggtaaacaaatgattccacacagcgaggaggcagtacaagtgacacaaaattttgccaactattttatcaggtctgtgattaaggcgctcactttattcattaagttggcattactccatgactgcatcctactgtccttgatatttttggtcatgcatatcattctgtgatgaaaagttgaaaacatacttgcgttggtggcacattacatgtccaaattattctatggaattaaatctaagacgatgatgggccattaacctttcatgtcagtatctctccttttaatgataattttaatcttttactggcacttcccgattatgcgtaatcacagtagctgttcagtttgtagcattcgtgcacagcgtttttatatttcaaaacaattgtaagccatgctccccacaagcaaccacagttttcgctatgaagcaaaacccaaaaccgattgaggtacagcatgagcatgagtgcatgacacactcacacaccctttatgggttggctgcagaccaaataatcccaggtcatttcaatcgttccttgtttatagcttctgttgcaacaagcctgaaacataccagtaaattgcaatgcttctgttgcaccatgctccttccagtgcatgctatccatatgcaagtgctaaatttgcaattccactgcagtaaatcatgttcatcgcattctcaccctgtcgctctgacttgaaacagccaagcccgcaagtcccagaacagacctcccgcagacaaggtgttggacaacctgatttacaactacagccctacgtttattgggaaaaaatcgtgagtctcttgtcacttcctgctacgctgtctgctatccgttcattattcctctgatcaaatgaacacatttaaatgcaatgtaggaaatcgttcgacgtggtctacatcttctcctaatggccaacctgatcattgaaagtcttcgctattgtattctacatggagtgcttcactgtgtatgagtatatatgtgtccattgtctaccattgtgctgcattgccgttgccgctgtaatttatcagacgaatcaagagcggatttcgctccctgctttggaaggaggtcccagctgtttgatccgcggtcacattattcgtttcggacccttggaaattaaacagcaaatatagttgttggcccaactgagcccgcttttcat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0517500, RefSeq:Os05g0517500