Os05g0518300

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Revision as of 10:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0518300| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001062592.1 GI:115464914 GeneID:4339334| Length = 2098 bp| D...")
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Gene Name

Os05g0518300

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001062592.1 GI:115464914 GeneID:4339334

Length

2098 bp

Definition

Oryza sativa Japonica Group Os05g0518300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25744190..25746287

Sequence Coding Region

25744343..25744566,25745017..25745640,25745974..25746223

Expression

GEO Profiles:Os05g0518300

Genome Context

<gbrowseImage1> name=NC_008398:25744190..25746287 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25744190..25746287 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggtgcttggcggcggtggccggtggtggtggcggcggcggtcgtgctggccgtggcggcgccggtgcaggcggcgccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaacgatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggcgccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatctctaagcttctggggttcgaggacttcatcccgccgttcgccggcgcgagcagcgaccagctgctgaccggcgtgaacttcgcgtcggcggcggcggggatccgggaggagaccgggcagcagctgggggcgcggatcagcttcagcgggcaggtgcagaactaccagtcggcggtgcagcagctggtgagcatcctcggcgacgaggacacggcggcggcgcacctgagccagtgcatcttcaccgtcgggatgggcagcaacgactacctcaacaactacttcatgccggcgttctacaacaccggcagccagtacacgccggagcagtacgccgacgacctcgccgcccggtacgcgcagctcctccgcgccatgtacagcaacggcgccaggaaggtggcgctcgtcggcgtcggccaggtcgggtgcagccccaacgagctcgcccagcagagcgccaatggcgtcacctgcgtcgagcggatcaacagcgccatcaggatcttcaaccagaagctcgtcggcctcgtcgaccagttcaacaccctccccggcgcacacttcacctacatcaacatctacggcatcttcgacgacatcctcggtgcacccggatcccacggtttgaaggtgacgaaccaggggtgctgtggggtggggaggaacaacggtcaggtgacgtgcctgccgttccagacgccgtgcgccaacaggcacgagtacgccttctgggacgcgttccacccgacggaggcggccaacgtactcgtcggccagaggacgtacagcgcgcggctgcagtccgacgtgcacccggtggatctccgcactctcgcgagcctctaa</cdnaseq>

Protein Sequence

<aaseq>MAGAWRRWPVVVAAAVVLAVAAPVQAAPQVPCYFVFGDSLVDNG NNNDIVSLARANYPPYGIDFAGGAATGRFSNGLTTVDVISKLLGFEDFIPPFAGASSD QLLTGVNFASAAAGIREETGQQLGARISFSGQVQNYQSAVQQLVSILGDEDTAAAHLS QCIFTVGMGSNDYLNNYFMPAFYNTGSQYTPEQYADDLAARYAQLLRAMYSNGARKVA LVGVGQVGCSPNELAQQSANGVTCVERINSAIRIFNQKLVGLVDQFNTLPGAHFTYIN IYGIFDDILGAPGSHGLKVTNQGCCGVGRNNGQVTCLPFQTPCANRHEYAFWDAFHPT EAANVLVGQRTYSARLQSDVHPVDLRTLASL</aaseq>

Gene Sequence

<dnaseqindica>1722..1945#648..1271#65..314#atctcacactgctcttagtgatagtggcagtgtcagcgtacgtgtctcgtcgtcgtcggaattaatggcgggtgcttggcggcggtggccggtggtggtggcggcggcggtcgtgctggccgtggcggcgccggtgcaggcggcgccgcaggtgccgtgctacttcgtgttcggggactcgctggtggacaacggcaacaacaacgatatcgtgtcgctggcccgcgccaactacccgccctacggcatcgacttcgccggcggcgccgccaccggccgcttcagcaacggcctcaccaccgtcgacgtcatctgtaagcttagctacttcctccgtttcgatttataagacattttaactttagtcaaagttaaactgttttaactttaactaaatttatagaaaaaaatagtaacatatttaactcaagataaatttattataaaaatatatccaattattgatttaatgaaactaatttagtattataaatattaatatgtttatttataaacttagtttaacttaaaaaaatttgacttttttgcaaaaacagtttgattttaaccaaaatcaaaacgtctcgtacgtgatgacatagtacatggcgctgatcacaatgtgcgcgcgcgcgtgtggtgtgcagctaagcttctggggttcgaggacttcatcccgccgttcgccggcgcgagcagcgaccagctgctgaccggcgtgaacttcgcgtcggcggcggcggggatccgggaggagaccgggcagcagctgggggcgcggatcagcttcagcgggcaggtgcagaactaccagtcggcggtgcagcagctggtgagcatcctcggcgacgaggacacggcggcggcgcacctgagccagtgcatcttcaccgtcgggatgggcagcaacgactacctcaacaactacttcatgccggcgttctacaacaccggcagccagtacacgccggagcagtacgccgacgacctcgccgcccggtacgcgcagctcctccgcgccatgtacagcaacggcgccaggaaggtggcgctcgtcggcgtcggccaggtcgggtgcagccccaacgagctcgcccagcagagcgccaatggcgtcacctgcgtcgagcggatcaacagcgccatcaggatcttcaaccagaagctcgtcggcctcgtcgaccagttcaacaccctccccggcgcacacttcacctacatcaacatctacggcatcttcgacgacatcctcggtgcacccggatcccacggtaggaccgaccagtacacctcaaaaaagctcataatcaaaatcgtttcaccgcatacacacaagggtttgaattttcagttcgaaatttcggaccccaccggcaagcacaaatctaccctgaaacttcagattttttaaaaatatctatgaatttggtaaacttttattcaaattcagtcaaaaatatgttaaaatttcaaataatttcatgcaaaaacaccaaaattcaaaaaaattccaaattttggcaaccaccgaatttcagtggttaccgaaatcgcaaaccgtcaccgattgaccgatcaaaccagttcaacctaaaagcttgtgaagtcgtctagtcacgtgcaccggagacgtgcaccggtcggttaccgaccagcctatccagttcgacctaaaagcttagcttagcttagcttagcggagaaatattttgtttgtgcaggtttgaaggtgacgaaccaggggtgctgtggggtggggaggaacaacggtcaggtgacgtgcctgccgttccagacgccgtgcgccaacaggcacgagtacgccttctgggacgcgttccacccgacggaggcggccaacgtactcgtcggccagaggacgtacagcgcgcggctgcagtccgacgtgcacccggtggatctccgcactctcgcgagcctctaattaagctcgatcacatggccaaaaaattgcttatatatagttatatggcaattgccaaataacattataggtatcatggattttttttttactacaatgtacaacgacgtgtagtagattcttttgagatcacagttattatattgttcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0518300, RefSeq:Os05g0518300