Os10g0533900

From RiceWiki
Revision as of 21:12, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0533900

Description

Protein of unknown function DUF862, eukaryotic domain containing protein

Version

NM_001071693.1 GI:115483129 GeneID:4349227

Length

8561 bp

Definition

Oryza sativa Japonica Group Os10g0533900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21223772..21232332

Sequence Coding Region

21223933..21224067,21224215..21224476,21225128..21225195,21231887..21232162

Expression

GEO Profiles:Os10g0533900

Genome Context

<gbrowseImage1> name=NC_008403:21223772..21232332 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21223772..21232332 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggaggtggtgctccacgtgtacgacgtgacgaacagcgactcggagaagacgaacaacaccatcctccagatcaaccgcatcttcaaggaccggatcggcctcggcggcatcttccacagcgccgtccaggtctatggcgaggaggagtggtcgttcgggttctgcgagaacggcagcggcgtcttcagctgccccatcgggaagaaccccatgtacacctaccgcgagtgcatcgtcctcggggagaccgagtgctccatcgccaccgtgaaccggatcctgcgggagctcagccgcgagtggccgggacactcctacgacctcctctccaggaactgcaaccacttctgcgacgtgctctgcgagaggctcgccgtccccaagctcccaggctgggttaatcgttttgccaatgctggtgataccgctgtggtagttgctgagaacacagcagttaagttcagacaggctaaaacagaaatagtcaatgccagtagagtagcatacagatttatggcaggcctggcatcgaaaaatcaaaacccacaaccagagtccccaagtaaccaaagcagaaatggcccaactttccaggggacttggttcaagaacatcatttcgaatggcgcaaagccttcctcaagcgaatcaacttcatcgcatgacactggtactggtggtgatgaatcctctttgcagaatcaaaaaccgtcggagcagtcaacacggttgtag</cdnaseq>

Protein Sequence

<aaseq>MKEVVLHVYDVTNSDSEKTNNTILQINRIFKDRIGLGGIFHSAV QVYGEEEWSFGFCENGSGVFSCPIGKNPMYTYRECIVLGETECSIATVNRILRELSRE WPGHSYDLLSRNCNHFCDVLCERLAVPKLPGWVNRFANAGDTAVVVAENTAVKFRQAK TEIVNASRVAYRFMAGLASKNQNPQPESPSNQSRNGPTFQGTWFKNIISNGAKPSSSE STSSHDTGTGGDESSLQNQKPSEQSTRL</aaseq>

Gene Sequence

<dnaseqindica>162..296#444..705#1357..1424#8116..8391#gttaccaccaccaccacctgcaagcaaccaaccaaccaccacccgctcgctcgccgaccgccaccggcgacccaatcacccctcgccgccgccgccggagaaggaggaggagggagggagcagccggcagcggggagggggcgcgctgcgccgttgatgagatgaaggaggtggtgctccacgtgtacgacgtgacgaacagcgactcggagaagacgaacaacaccatcctccagatcaaccgcatcttcaaggaccggatcggcctcggcggcatcttccacagcgccgtccaggttcgcctccgcgcggcctcccagatcccccctagtgaggggcgcatttgcttttgcttcgccttcgccttccttcctcctccagatctcgctgattttggttggttctctctcgcccttttttgttcggatcccggaggtgcgcaggtctatggcgaggaggagtggtcgttcgggttctgcgagaacggcagcggcgtcttcagctgccccatcgggaagaaccccatgtacacctaccgcgagtgcatcgtcctcggggagaccgagtgctccatcgccaccgtgaaccggatcctgcgggagctcagccgcgagtggccgggacactcctacgacctcctctccaggaactgcaaccacttctgcgacgtgctctgcgagaggctcgccgtccccaagctcccaggtaaggggattgggattcgcagctcccgctcttccgattagagagtagcaattgcccgtgcaatgtgtatgtgtgcccaagggataccaattctcaactctgtaatgcagagaaactatgcggcgttgtctaacattaacatcggtaggtatagtaacagcagatcctaatttatttagttcatgcaaaatatgctgttggggaaatggaggagattgttacgaattggagattgtcggggagggatgggtgtacaacttggtggtactcgattagacagtagccaagaagttttactagagagtagcagttgtgctgaactcaaattcagggtgttttattttgttagagggctagtgagtagagctgcagcttagcaggagggatagcatttcttggaggtgctaattctcttggctgtatgttataacattagggacttgatttcagaactagatgaactgataaagaacaataataagctagggccgatgtgcctttatgtgaaatagatgagatttgctcacaagtcacaacttacttaaattaattgtttgtcttatccatgctaagtatggttgtattcctgctcagatttaaaatgacagataatatatttttttaactgatcttgtgttaaaaactgtgcaggctgggttaatcgttttgccaatgctggtgataccgctgtggtagttgctgagaacacagcagttaaggtatgcttattttaacttttcttacttatgcatcagcaagtttttctcttgtatgttcattgttgtgtagcacacactcttgcctgttggtatgtttaagtttttgtgtgtgttgaactaaatatttcattacaatgcttagttttcattgagtggtgaattcattgtaatgctcattttagaacagcatttataatggcattaagcttcaacaaagcctatagattcaacttagttcatgtccatagcggctatcagtgtgtcatgcacatcccaataaatccttttataattttttaataaacttcattgtagagaattatgagacgcctcacaacccaacgtgggagggcgattgtatttatatatccaatacaatagagattacaacaaactcttaaataagagttatatacggatacaatctatacaaatctaatctaactctaatacccgcccgcagtcaaagcgggaggaacatcacgaacgcaaagactggacctaaactcagtgaataactgaactggcaagcctttggtcatgatatctgcgaactgatgtgaggacagaacgtgtaaaacacgaacttgtcctaaagcaactttctctcgaacaaaatgaatatcaatctcaatatgcttcgttcgacgatgatgaacaggattagcggtcatgtagacggtgctaacattatcacaataaacgatagtggccgaagcaagtggaatatgtagttcaagaagaagttgtcgaagccagcaacattcggcaacagcatgtgctactgcacggtactcagcttcagcactagatcgagagacagtggtctgtcgcttggaggaccatgagaccaagttttcaccgaggaaaacacaataccctgatgtggaacgacgagaatcaggacaacccgcccagtcagcatcagaataagctgtcaaagagtcaactggtgcagttccgatgtgaagaccaatgtgtagagtacccttgatgtaacgcaaaatccgtttaactagagcaagatgaggctcacggggatcatgcataaacaagcatacctgctgaactgcataagctatctcaggccgcgtgagagtaaggtactgaagagccccagctagactcctgtactcagtaggatctgaaacgggagctccatctgtagcagaaagtttacatcgagcatcaaccggtgttgcagtaggatgacactccgacataccagctcgccgcaataagtcaacagcatattgccgctgagaaagaaataaaccgtctgcagatcgagtgacagaaattcccaaaaagaagtgtaagtcaccaagatcagtcatagcaaactccgagtgtaggcgagcagtaatatgctgaagaagtgaagtggacgaggcagtcagcatgatgtcatcaacatacaaaagtaaatatgcaacattatctccatctttataaatgaagagagaagtgtcagatgccgaagatgtgaaacccaactgacgaatatatgttgaaaaccgttggtaccaagcacgaggagcctgcttcaaaccatagagcggtttttggagcaaacatacagcagtaggcacagaaggatcaacaaaaccagatggttgctgacaatacagtctcctctagattgccatggagaaatgcgttcttgacatcaagctgatggataggccaagaccgagaggcagcaatactgagaacaacacgaatagtagcaggtttaacaactggactaaaagtctcatcgtagtcaatcccatgctgttgagaatagccacgaacaacccatcgtgccttgtgtcgagcaagagtcccatcggaatgaaacttatgtcgaaagatccattttccggttacaacattagcaccaggaggtcgaggaaccaaacgccaagtgttgttatcaacaagagccttgtactcatcagccatagctgcacggcagttagggtcagccaaagcactacgataattggaaggaactggcgaaacagaagtctgcatagcggtataattaaagcgctggacaggacgaagattgccggtctgagagcgagttaccatagcatgacgctgttgatcctgtgtatgttgtgcagctcgaaaagctctggtggtgcgtataggaccatgaaccgccacaggctgagtacgacgcacatacgtatggcgatatggagagatcagcggccgagcagaagcaacaccatgcaaggcaggcggctgagcaatagaagaattcgatatagtttgcactggtgatgaagaagacatgctcccgcccgtagtactagcatcggcaccagaggatgcactggaaggcgccaatatagctggttctggagcttgcgatgattgtagccttctattatggagaagaagccgatacatatcagggccggccaagtcatccagcggctcgacctcaggagagggagcgaccagtagagaacgcggacgctcgacgtccaaggaggacggagctaccgctttagaaacaccctgtagaagaaaatcaaaagaagaagcagtttggggaatagctgcaaacgggaatgtctgttcatcaaaaaccacatgacgagagatgaaaacatgacgggtagaaatgtccaaacaacgatagcccttgtgagaagccgggtaaccaagaaaaacacaggcagcggatcgaggagagagtttatgaggagtcgtggcactaagattaggataacagaggcaaccaaaaacccgaagattagaataatcaggaactttgtgatgcaggatttgaaacggaatggagtcgtggacggaagttgagggtcttcgattgagtaagtatgtggctgtggctagagcttcggcccagtaaggaggcatggatgcttgtatgagtagggtgcgaatggaattgttgattgtgcgaagcatgcgttcggctttgctgttttgaggagaagtgtaaggacaggataagcgaagcaaggttccacggctagcgagaaacgaggtagtggcttggttaacaaattcggtaccattatccgcctggaaacacttaatggaagagccgaactgggtcgtaacataagcaacaaactcaacaatatgctggtgaacatcagacttatggcgaagaggaaaagtccaacaaaagtgactaaaatcatccagcaccactaaataatacttaaagccagaagtactcaagacaggagaggtccacacatcacagtgaacaagctcaaaaggagaagatgtactagactgagaccgagaaaaaggtagacgcgtgtgtttccctaactgacacgcatgacacaaactatgatctatcttagtataaggaagaatagctaatttgtggagagtctgaatagcagctgaactgggatgaccaagacgacgatgccacagggtagaggattgggccaggaagctgtgggcagcaatagcaggtgcagcagtaggtagagtgtagaggtcaccacgactattgcagcgaagaatcacgcgccgggtacggaggtccttaacagaaaaaccaaactcatcaaactcaatggaacagttattgtcacgagtgaattgacgaacagaaagtagattgcgaaccaaagagggggcgacaaggatgtttttaagatcaaatttagtggttcctataggtagaaaagaagtgccacgacaaataacaggaatagtatgaccattgccaacggtaatgaaggtatgggaattgggaagacgagtaacgagaatatcgtcggtagaggacatgtgtgaagtggctcctgtgtcaagcacccaaggacttggactttgcacggacaactgattgagggcagtaatcagacctgcctgatcccaattgggctgagattgctgcattggtggcaagcccggcattggtggagagacatatgggcctgcaaatgtcgtgtgtgcttgaggatatgggccaagcaggccggcactgttgctgggacgccagagagactgctgctgctgcacagcccatggattgaaacagacccatgggccggtaggtcgtggcccagcctggtgctgctgctgctggaaattgttcccgaagttgccatagccgccgccattgctgttgttctgtcgtccgccattgccgccaccactgctgttggtcgctggttgcggcgaccaccgttgttggagccaccgccacgagactgggatgaagaagaggacgcacaggtgccggaagtgcagtcattggcagaggaggcagccaccaccatggctgtctcagcctggaccttgtgtgcattggcaattcgcagctctttgagcaacaaggtgttgcgcgccaaggcaaaggagggcagaacaggggcgctggcgatgttgtcggtggtgctcgaaaaacgagagttgaggccgctcagcaagttgaggacaagctgagattcggtgacagggtggccgacgtcgcggagggcatcggcagcagtcttcaccttctgacaataatcggcaatgggcatgtcaccttgcgtcattgagtggaactcgtgactgagatagatggcgcggggttccttgtttgcttgaaagagatcgtcgatggcgagccataggtcgcgggcggtctggtcgggttccatgacgacgtcgaggatagcatcggaaacggagctgaacagccagccccgaacacaacaatcggcttgtgcccaagtcgagtcttcgggacgagggggtgcggtgccatcaatgtgaggaaggagcccaaacttgccacgcatagaagtgaagaaggtcttccacttgttgaaattggggtgcttgagctccagggtaattggtatgtgagtcttgacgttgacggtggcatacgggttgacgaagatcgagccggtagaatccctggtgctggcagcagaagatggagtagagccggatgatgtagatgccattgttcccgaggttgtggaagaggaggtggactcggtagacatggcagagaggcagaataatcacgacgcggcgaagacagaaggcggcgcagcgtgagcagagcagggcagagcgcggcgtggcgcgatgggggcagagcgtggcgcggcgcggaatgagcgagggcgcggcgcggtgcgtcgtggcacgatggtgacgcggaaggcgcggtggggctggggcgcggcgagatcgtgaggggaaatcgctggggcgcggcgcggtggtggggacgcggaagtcgcgtgggcagcggaagagaagcgaacgcggaaaaagcgaaggccagaggaagcggcgaattaggttagaaggaaaccggtatctgataccatgtagagaattatgagacgcctcacaacccaacgtgggagggcgattgtatttatatatccaatacaatagagattacaacaaactcttaaataagagttatatacggatacaatctatacaaatctaatctaactctaatattcatgttcatagggaagttttctctttgttgattttgtaattgtgactatagtacatacagtatgtagttgagttattttattatgtggtgcacttgacttttctattcaactacttaatttaaagtctgcaccccatctctagattcctggctttaccacaaaaatagatttgaccatgtatgtcactcagaaactttgcttagtctatccttcaggaccttcaccagaaaatccagtgctggtctgattgttcatagattttcatttacatggcagcttggcttggtgagcacagcatgatctacttcgttagctctgttgttttgactcatttacatgatatacttctgtgttagcatcttctctgtgaatacattaggtgttaatacatgataccactacgccatgaatccttgaaaattgccatgttatggacttaatccatgcattcaaacaatgtacgtgtagccatcatagtcactagctcatcagttgactgaccatttccctttctcacattgatcaatgagataatgcattgaaagtgaaacacctacttaagtgaatctgcataactataaatggcaacaaacttttcagccacctttcttgaagttgttgacagtatccctttagatgttatggtcatgtcatactgtcatgcccatctaagatactccagttatcttctgtaaatgctattttttccttttatagttacaagatgtccattactagataaatacctcaaaatggtctacttgtcactactgttgcatctatattctttttcttcacgactttcctcatgttggttactttccatattcatgttttagatcttgaggctttctacaatccttggggggtataggtatctgtagtattaattggagggatagtatgactgaaatgagggatataccttgtgactaacattatgaagcatatatgtctcaagaaccctataaaaacccttagatcttatgctattttcatcaagatatagacagttgtacactcaatgccatttacgtttggacaacaacagttgcatgcattttttttgtttttgctaatgtgattatagaccattcctacaatatgaagtaggataaatgagcgattctgagcttgatcaccgtgttgcttatatgtagtgatatcacattcattatttctcctaacatgcttttttattgtgaaattctgttttgcagttcagacaggctaaaacagaaatagtcaatgccagtagagtagcatacagatttatggcaggcctggcatcgaaaaatcaaaacccacaaccagagtccccaagtaaccaaagcagaaatggcccaactttccaggggacttggttcaagaacatcatttcgaatggcgcaaagccttcctcaagcgaatcaacttcatcgcatgacactggtactggtggtgatgaatcctctttgcagaatcaaaaaccgtcggagcagtcaacacggttgtagccgctgccaccagttatcacctgttgaattgaatctgtagtgtaacagtagccagcatttgttaaaaatacatggcatgtttattcacgcatgaatctcttgtatctctgcgttgtcttgcaacgggaaacatgaaatgttaaaacacgtcatccaaagcttgacagttt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0533900, RefSeq:Os10g0533900