Os09g0553900

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0553900| Description = Conserved hypothetical protein| Version = NM_001070419.1 GI:115480580 GeneID:4347805| Length = 3024 bp| Definition ...")
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Gene Name

Os09g0553900

Description

Conserved hypothetical protein

Version

NM_001070419.1 GI:115480580 GeneID:4347805

Length

3024 bp

Definition

Oryza sativa Japonica Group Os09g0553900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22777584..22780607

Sequence Coding Region

22777677..22780328

Expression

GEO Profiles:Os09g0553900

Genome Context

<gbrowseImage1> name=NC_008402:22777584..22780607 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22777584..22780607 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgacggcaagagcagtaaccagatcctccaggagctcgacgcgctcagccacacgctgtaccaggcgcacaccaaccgccggaccgcgtcgctcgcgctgcctcgctcggcctccgaggtcaatggcggcggcgccgatgtcgtccgggccgagtcgcgcccgcggtcgcggcggctgtccctgtcgccgttccgctcgaggcctaagcaggacaagaacgcgatcgtcgacgacgacgacgacgacgacggcgacgacgatggcgacaagggggcacgccgcgcgccgtccaagagccagagcttcgcggcggtgacgaccccgggcggcgaggcggcggcggtggcgggagagaagaaggggatatggggctggaagccgatccgcgcgctgtcgcacatcggcatgaaccggctcggctgcctcttctccgtcgaggtggtggcggcgcagggcctgccgccgtccatgaacgggctgcgcctcgccgtcgccgtgcgcaagaaggagacgcgcgacggcgccatgcagaccatgccgtcgcgcgtgcagcagggcgccgccgacttcgaggagacgctcttcgtgcgctgccacctctactgcagcggcggcgccggcaccggcaagccgctcaggttcgagccccggccgttcctcctgtcggcggtggccgtggaagcccccgagctcgactttggccggagcgccgtcgacctgagcctcctcgtgaaggagtccacggacaagagccagcaaggggagcgtgtccggcaatgggacatggcgttgccgctcgccgggaaggcgaagggcggcgagctcgtcgtcaaactgtcgttccagatcatggacgacggcggcgtcgggctgttcaaccagaccggagcagcaaccaagattaactcgtcgtcgtcgtcttcttccttgtttgcacggaagcagagcaagctatccttcagcatcacgagcccgaaggtgtcgcggtcggagccgaagctgacgccgacaaagggctcgccgtcgccggacttgcgaggcattgacgacttcaagctcgacgagcccagtttgccatcgctggcagaggccaagcaagagcagaaggagccagagccgccggagccggaggagaaggtcgatgactcggagttcccggagttcgacgtagtggacaaaggagtggaagggcaagaagagaacgtcgttgaagcgaaaggcgcggcggaagaagaagccaaggaggagaaggcggcggcggaggaggcgcccacgtcggccgccggcgacgaggtcgtgaaggaggtggtgcacgacagcgcgcacgcgtggcgcatcaacgagctggaggcgatcaccaaccagatcaaggctctcgagtcaatgatgctcggcgacgcgccggccgccggcaagacggaggatacgcgggacggcgacgcggcggcgctggacaccgacgaggaggaggtgaccagggagttcttgcagctgctggagcaaggagacggcaaggccaccctcgccaagtcggtgtcatcgctcaagtccggcgcgaagcgggacaccggcggcgccgccgacgcgtcggcggcgtgctacatctccgacctcggcaaggggctcggccccatcgtgcagaccagggacggcggctacctggcggcgaccaacccgttcgacatccccgtggagaggaaggagctccccaagctcgccatgcagctgtccaagccggtcatcctccgcgaccagaggctccccggcggcggcgccgagctgttccagcagctgtgcgccggcggctgcgaggccctgttcgagaagctggcggcgctcgtcgggacggacgaggtggtcggcaagacggcggagcagatcgccttcgagggcatggcgacggcgatcatcagcgcgcggagcgcggcgctcggcgcgagctccagcgcggcgcagaccgtgtcgctgcttcggacgatgtcgtcggcgatgagcgacgggcggcaggagaggatcgacaccggcatctggaacgcccacgagacgccggtgaccgtcgacgagatcctggcgttctcgctgcagaagatcgaggccatggccatcaaggcgctcaaggtgcaggccgacatggccgacgagcagtcgccgttcgacgtgtcaccggccagcgacaagcggggcggcggccacctcctcgacgccgccgtgccaccggaggattgggcgctcgcctgcgtcggcgccgacacggtgaccatgctgctcgtcgcccagctaagggatcccctgcgccggtacgaggcggtcggcgcgccgtcgatcgtgatcatccaggccgtcagaatcgccggcaacgacgacgacgacgagccgaagttcaaggtggcgaacatgcacgtcggcggcctccggctgaagtcggccgaccggcgtaacgtctgggacggcgagaagcagcggctgacggcgatgcactggctcgtcgcctacgggctcggcaaggccggcaggaaggggaggacggcggcggcggcggggaaatccggccatgacgtgctctggagcatgtcgtcgagggtgatggccgacatgtggctcaagccgttgcgcaaccctgacgtgaagatccctctcaagtag</cdnaseq>

Protein Sequence

<aaseq>MADDGKSSNQILQELDALSHTLYQAHTNRRTASLALPRSASEVN GGGADVVRAESRPRSRRLSLSPFRSRPKQDKNAIVDDDDDDDGDDDGDKGARRAPSKS QSFAAVTTPGGEAAAVAGEKKGIWGWKPIRALSHIGMNRLGCLFSVEVVAAQGLPPSM NGLRLAVAVRKKETRDGAMQTMPSRVQQGAADFEETLFVRCHLYCSGGAGTGKPLRFE PRPFLLSAVAVEAPELDFGRSAVDLSLLVKESTDKSQQGERVRQWDMALPLAGKAKGG ELVVKLSFQIMDDGGVGLFNQTGAATKINSSSSSSSLFARKQSKLSFSITSPKVSRSE PKLTPTKGSPSPDLRGIDDFKLDEPSLPSLAEAKQEQKEPEPPEPEEKVDDSEFPEFD VVDKGVEGQEENVVEAKGAAEEEAKEEKAAAEEAPTSAAGDEVVKEVVHDSAHAWRIN ELEAITNQIKALESMMLGDAPAAGKTEDTRDGDAAALDTDEEEVTREFLQLLEQGDGK ATLAKSVSSLKSGAKRDTGGAADASAACYISDLGKGLGPIVQTRDGGYLAATNPFDIP VERKELPKLAMQLSKPVILRDQRLPGGGAELFQQLCAGGCEALFEKLAALVGTDEVVG KTAEQIAFEGMATAIISARSAALGASSSAAQTVSLLRTMSSAMSDGRQERIDTGIWNA HETPVTVDEILAFSLQKIEAMAIKALKVQADMADEQSPFDVSPASDKRGGGHLLDAAV PPEDWALACVGADTVTMLLVAQLRDPLRRYEAVGAPSIVIIQAVRIAGNDDDDEPKFK VANMHVGGLRLKSADRRNVWDGEKQRLTAMHWLVAYGLGKAGRKGRTAAAAGKSGHDV LWSMSSRVMADMWLKPLRNPDVKIPLK</aaseq>

Gene Sequence

<dnaseqindica>94..2745#atctgcttctttctttagcttgctagctactagtactagtaattgtagtggtgagtcgttgccggcgaggtcggagcagcagcagaagcagccatggcggacgacggcaagagcagtaaccagatcctccaggagctcgacgcgctcagccacacgctgtaccaggcgcacaccaaccgccggaccgcgtcgctcgcgctgcctcgctcggcctccgaggtcaatggcggcggcgccgatgtcgtccgggccgagtcgcgcccgcggtcgcggcggctgtccctgtcgccgttccgctcgaggcctaagcaggacaagaacgcgatcgtcgacgacgacgacgacgacgacggcgacgacgatggcgacaagggggcacgccgcgcgccgtccaagagccagagcttcgcggcggtgacgaccccgggcggcgaggcggcggcggtggcgggagagaagaaggggatatggggctggaagccgatccgcgcgctgtcgcacatcggcatgaaccggctcggctgcctcttctccgtcgaggtggtggcggcgcagggcctgccgccgtccatgaacgggctgcgcctcgccgtcgccgtgcgcaagaaggagacgcgcgacggcgccatgcagaccatgccgtcgcgcgtgcagcagggcgccgccgacttcgaggagacgctcttcgtgcgctgccacctctactgcagcggcggcgccggcaccggcaagccgctcaggttcgagccccggccgttcctcctgtcggcggtggccgtggaagcccccgagctcgactttggccggagcgccgtcgacctgagcctcctcgtgaaggagtccacggacaagagccagcaaggggagcgtgtccggcaatgggacatggcgttgccgctcgccgggaaggcgaagggcggcgagctcgtcgtcaaactgtcgttccagatcatggacgacggcggcgtcgggctgttcaaccagaccggagcagcaaccaagattaactcgtcgtcgtcgtcttcttccttgtttgcacggaagcagagcaagctatccttcagcatcacgagcccgaaggtgtcgcggtcggagccgaagctgacgccgacaaagggctcgccgtcgccggacttgcgaggcattgacgacttcaagctcgacgagcccagtttgccatcgctggcagaggccaagcaagagcagaaggagccagagccgccggagccggaggagaaggtcgatgactcggagttcccggagttcgacgtagtggacaaaggagtggaagggcaagaagagaacgtcgttgaagcgaaaggcgcggcggaagaagaagccaaggaggagaaggcggcggcggaggaggcgcccacgtcggccgccggcgacgaggtcgtgaaggaggtggtgcacgacagcgcgcacgcgtggcgcatcaacgagctggaggcgatcaccaaccagatcaaggctctcgagtcaatgatgctcggcgacgcgccggccgccggcaagacggaggatacgcgggacggcgacgcggcggcgctggacaccgacgaggaggaggtgaccagggagttcttgcagctgctggagcaaggagacggcaaggccaccctcgccaagtcggtgtcatcgctcaagtccggcgcgaagcgggacaccggcggcgccgccgacgcgtcggcggcgtgctacatctccgacctcggcaaggggctcggccccatcgtgcagaccagggacggcggctacctggcggcgaccaacccgttcgacatccccgtggagaggaaggagctccccaagctcgccatgcagctgtccaagccggtcatcctccgcgaccagaggctccccggcggcggcgccgagctgttccagcagctgtgcgccggcggctgcgaggccctgttcgagaagctggcggcgctcgtcgggacggacgaggtggtcggcaagacggcggagcagatcgccttcgagggcatggcgacggcgatcatcagcgcgcggagcgcggcgctcggcgcgagctccagcgcggcgcagaccgtgtcgctgcttcggacgatgtcgtcggcgatgagcgacgggcggcaggagaggatcgacaccggcatctggaacgcccacgagacgccggtgaccgtcgacgagatcctggcgttctcgctgcagaagatcgaggccatggccatcaaggcgctcaaggtgcaggccgacatggccgacgagcagtcgccgttcgacgtgtcaccggccagcgacaagcggggcggcggccacctcctcgacgccgccgtgccaccggaggattgggcgctcgcctgcgtcggcgccgacacggtgaccatgctgctcgtcgcccagctaagggatcccctgcgccggtacgaggcggtcggcgcgccgtcgatcgtgatcatccaggccgtcagaatcgccggcaacgacgacgacgacgagccgaagttcaaggtggcgaacatgcacgtcggcggcctccggctgaagtcggccgaccggcgtaacgtctgggacggcgagaagcagcggctgacggcgatgcactggctcgtcgcctacgggctcggcaaggccggcaggaaggggaggacggcggcggcggcggggaaatccggccatgacgtgctctggagcatgtcgtcgagggtgatggccgacatgtggctcaagccgttgcgcaaccctgacgtgaagatccctctcaagtagatgctgcattgctgcctctgtgcttctctgatgctgaaaaaaaaagaacatattcaagcccggttctctttatattcttctgaattttgaaagctcaagattgtaatttatacttggttcctgcattgtgattgtattgtaatgaggaaatgtgagtgtctaagaattagattccaacactgtttattgtgttgtaagtattcatgtcatgtactgaaagaggcataatactgtttctgtaagttcacaaagcttagttcaaaatgtacaaaaattttg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0553900, RefSeq:Os09g0553900