Os05g0519200

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Revision as of 10:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0519200| Description = Protein kinase-like domain containing protein| Version = NM_001062596.1 GI:115464922 GeneID:4339338| Length = 3935 b...")
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Gene Name

Os05g0519200

Description

Protein kinase-like domain containing protein

Version

NM_001062596.1 GI:115464922 GeneID:4339338

Length

3935 bp

Definition

Oryza sativa Japonica Group Os05g0519200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25833239..25837173

Sequence Coding Region

25834075..25835148,25835723..25836178,25836710..25836994

Expression

GEO Profiles:Os05g0519200

Genome Context

<gbrowseImage1> name=NC_008398:25833239..25837173 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25833239..25837173 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgatgatgactactcctgggtgcggcgcaccaagttctcgcactccattgttaaatccaactctggcagggagcagtttggtgcattccttgatccgtttgacagttccactgcatggaggcagaaaggattcagtggagagctcatgattcatggacataatttacagccgagggcaaaaggagcagtctcaaagtcacctaggccttcaatcccgttggcgaaatcaccagtttcacaggcagagcggaagctgaaagctaagttttcagatggtgaattgaaacaacgggggaaaattagtgatggctcgttgcgagaagcatcgaaagagaaggatcgcaaggttgggcataaaggagaaggccttagcctggatatttcttgtccaattctggatcggacagttcaggatgacagttcagacacgcttgacttctctttccactcagaagagcaaagtttaaggttgctgagagtatgctcgagtccagctcctttctattcgaaggatacaactacgtttggtgattccaaaatacatagtacgtctgttaagattgttggagagggatcgaagccgaggaggagagcgaaatccccaatgccgacccgtgtcatctctgaagtttttaaggaggccaaagctgccactaagaggttctctagcccacagcggcaaaggaaatctagttctccacattcaccacgttcacccgatgatagtccccggtttggctttccttcaatgagaacaccgggtaacttgaaagctaggagggcctcgtcctggccaaggaactatgacaatggagtggccaaggctgttgcattggatatacttgagagatggacaattgaccgctcacagttactcattggtcaaagatttgcatcaggggcatatagtcgtttgttccatggaatttacaaggagcagccagttgctgtcaaatttatcaggcagcctgatgaagaagaagatgcagaattggctgctaaacttgagaagcaattcactgctgaagtaaccattctggctcggctccatcatcgcaatgtcattaagctgattggggcatgtaatgctccaccggtcttttgtgtcatcactgagttcctgtgcggggggtctttgagagcttttttgcgcaagctccagcgccaaaagcttcctttggagaagatcatttgcattgctttggatattgcacatggtttggagtacattcactcgcaaagagtaatccatcgtgatgtgaaacctgagaacatcttgtttgatggagaatgttgtgcaaaggttgttgattttggagtggcttgtgaagaagtatactgcaactcattggaagatgacccaggtacttacagatggatggcaccagagatgtataagcgcaaaccatatggtcggaaggttgacgtctacagttttggcctcgtattgtgggaattgtttagtggctcgatcccttatgaagagatgactccattgcaggcagcttttgcagttgttaataagaacttaagaccagttgttccttcaagctgtccggcgcaacttcgacttttgatcgagcaatgttggtcttgtcaaccagagaagagacctgagttttcccaagtagttcagatcctcaaaaatctcaaggaggccctggatagagatggaacgcttgacaagatcccaagcaccaactgccaggaacctcctgatcagaacaagaagagactgtccaattggatccaaagactctcgtacagtcaggccgatttctccggacctccaccgccaaagttattgtaa</cdnaseq>

Protein Sequence

<aaseq>MDDDDYSWVRRTKFSHSIVKSNSGREQFGAFLDPFDSSTAWRQK GFSGELMIHGHNLQPRAKGAVSKSPRPSIPLAKSPVSQAERKLKAKFSDGELKQRGKI SDGSLREASKEKDRKVGHKGEGLSLDISCPILDRTVQDDSSDTLDFSFHSEEQSLRLL RVCSSPAPFYSKDTTTFGDSKIHSTSVKIVGEGSKPRRRAKSPMPTRVISEVFKEAKA ATKRFSSPQRQRKSSSPHSPRSPDDSPRFGFPSMRTPGNLKARRASSWPRNYDNGVAK AVALDILERWTIDRSQLLIGQRFASGAYSRLFHGIYKEQPVAVKFIRQPDEEEDAELA AKLEKQFTAEVTILARLHHRNVIKLIGACNAPPVFCVITEFLCGGSLRAFLRKLQRQK LPLEKIICIALDIAHGLEYIHSQRVIHRDVKPENILFDGECCAKVVDFGVACEEVYCN SLEDDPGTYRWMAPEMYKRKPYGRKVDVYSFGLVLWELFSGSIPYEEMTPLQAAFAVV NKNLRPVVPSSCPAQLRLLIEQCWSCQPEKRPEFSQVVQILKNLKEALDRDGTLDKIP STNCQEPPDQNKKRLSNWIQRLSYSQADFSGPPPPKLL</aaseq>

Gene Sequence

<dnaseqindica>837..1910#2485..2940#3472..3756#gagtgagagagctcgcgcgcgcgcgcgtgcgttcgcctactacattctttcccctccaaccttttcgaggtagtatatttttcctcgtcctccccgtgctcttgattctctgcctcggtttggtattttggcctttttgatcgggagggcggggggccaatttgatttgccgttcatttcgatttgatttgatccgatctgatctgtagaatagacatcacatcaggggtatggaggttggcgtgagcgaagctttgaatcccgggtagccgccggagagattgcgtcctctcgccttccctccctttgattcctgctcgcccgccgctcgtctttccgctctcgccgagacacggtgttcggcggccgcgcttgtttggtcgctgcctttttatgccaaacccatccgctttgagagattggcctgtcgttttcctgttgtttggtgtaagattccgtcgctcttgaaagctcacgatgcgaaaagaggggcgatttttttatgtttttgatttatggtattgagggttttttttttttgcttgctttgttgatggattcaggaggaggaggaggcggtggcgattgatggaatctgatcgaatgccgcttcaggctgggtcaatcgagctggctgcaacgatcggaggtttcctatcccctcgtgaaggtgtcaaatcagtatccttgtgccggatggtttggggataattttcgtagtgagttcataatagcgtctcatttgggattcctctggttgattcagttccctttgcaagtttgcgggtttgttcacggatttggttggcttgagatcgatcttcattcattgggagatggatgatgatgactactcctgggtgcggcgcaccaagttctcgcactccattgttaaatccaactctggcagggagcagtttggtgcattccttgatccgtttgacagttccactgcatggaggcagaaaggattcagtggagagctcatgattcatggacataatttacagccgagggcaaaaggagcagtctcaaagtcacctaggccttcaatcccgttggcgaaatcaccagtttcacaggcagagcggaagctgaaagctaagttttcagatggtgaattgaaacaacgggggaaaattagtgatggctcgttgcgagaagcatcgaaagagaaggatcgcaaggttgggcataaaggagaaggccttagcctggatatttcttgtccaattctggatcggacagttcaggatgacagttcagacacgcttgacttctctttccactcagaagagcaaagtttaaggttgctgagagtatgctcgagtccagctcctttctattcgaaggatacaactacgtttggtgattccaaaatacatagtacgtctgttaagattgttggagagggatcgaagccgaggaggagagcgaaatccccaatgccgacccgtgtcatctctgaagtttttaaggaggccaaagctgccactaagaggttctctagcccacagcggcaaaggaaatctagttctccacattcaccacgttcacccgatgatagtccccggtttggctttccttcaatgagaacaccgggtaacttgaaagctaggagggcctcgtcctggccaaggaactatgacaatggagtggccaaggctgttgcattggatatacttgagagatggacaattgaccgctcacagttactcattggtcaaagatttgcatcaggggcatatagtcgtttgttccatggaatttacaaggagcagccagttgctgtcaaatttatcaggcagcctgatgaagaagaagatgcagaattggctgctaaacttgagaagcaattcactgctgaagtaaccattctggctcggctccatcatcgcaatgtcattaaggtaattacacgaattccaatttaaaattttgtctggtattctatttctttctttgaagaagcgcatgctacagggctacaacattgtgtaatctctgctgctctatctatttattcatagaactgttcataattagaatataattcatgtgatccataacatttacacttctgtacctttcttttggcaatatgacccttttaacatatacactcaatattttaccagagccaaaggacatatacgaggaatatgtctattgttatgcgattgtgattactaagtatatgagaggtatatgctatcaattttaaatcaattatctacctactgctttagctttcagctgaagcaatgttatcatatttatcaaatggctcaaatacatgacatactctggtggagacgctcaattttatatgtaaccttagaattattcagaataaaagaacccaaagcattttcattgtgttgtctagattgctcctgcagtttattaaccatgttgattctttaggtctcatgtaatatgctacaagaaagacatttttttaatccttttttttttgtttagctgattggggcatgtaatgctccaccggtcttttgtgtcatcactgagttcctgtgcggggggtctttgagagcttttttgcgcaagctccagcgccaaaagcttcctttggagaagatcatttgcattgctttggatattgcacatggtttggagtacattcactcgcaaagagtaatccatcgtgatgtgaaacctgagaacatcttgtttgatggagaatgttgtgcaaaggttgttgattttggagtggcttgtgaagaagtatactgcaactcattggaagatgacccaggtacttacagatggatggcaccagagatgtataagcgcaaaccatatggtcggaaggttgacgtctacagttttggcctcgtattgtgggaattgtttagtggctcgatcccttatgaagagatgactccattgcaggcagcttttgcagttgttaataaggtattttcttttctagttcctcaatcctcatgtccaggacttagcaatttgctccgttcaaacttagaagcagttctccttatgaaacaaccactttacacacagcaattcttatattgatagccatgttttggtaatgcatatttttcgttacttctcttatgctggcaaactgttttgagtttcccttttttcagacaagacatatatccccatttcagaacttaagaccagttattcctccgagctgtcttctcttatgcgcgcaaactgttttgagtttccttttttcttttcatgacaagacatatgtccccatttcagaacttaagaccagttattcctccgagctgtcttctcttatgcgcgcaaactgttttgagtttccttttttcttttcatgtcaagacatatgtccccatttcagaacttaagaccagttattcctccgagctgtcttctcttatgcgcgcaaactgtttttgagtttccttttttcttttcatgacaagacatatgtccccatttcagaacttaagaccagttgttccttcaagctgtccggcgcaacttcgacttttgatcgagcaatgttggtcttgtcaaccagagaagagacctgagttttcccaagtagttcagatcctcaaaaatctcaaggaggccctggatagagatggaacgcttgacaagatcccaagcaccaactgccaggaacctcctgatcagaacaagaagagactgtccaattggatccaaagactctcgtacagtcaggccgatttctccggacctccaccgccaaagttattgtaattatatgcattcctctcttccataaatatcgtagcatctgctagatgtctctgtaaatcataaggttcttcttggtgtataaactccgcacatttttttagtggacagttcattcttgtttggcttagtaattttgcctgcaaccaaccaatggagtcttagttcccggcgggtgggga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0519200, RefSeq:Os05g0519200