Os10g0545600

From RiceWiki
Revision as of 21:12, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0545600

Description

WD40-like domain containing protein

Version

NM_001071745.2 GI:297610860 GeneID:4349282

Length

4204 bp

Definition

Oryza sativa Japonica Group Os10g0545600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:21778447..21782650

Sequence Coding Region

21778447..21778948,21779033..21779214,21779304..21779366,21780191..21780301,21780941..21781042
,21781123..21781176,21781495..21781530,21781811..21781855,21782318..21782650

Expression

GEO Profiles:Os10g0545600

Genome Context

<gbrowseImage1> name=NC_008403:21778447..21782650 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:21778447..21782650 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggccggcgacgaggagggagagcaggggcttcgcctcgggggagtgggggacggcgccgacggcgaggaggaggtggctcgaggagtggtggcgccgcaggtgctcgagctgagctcgtccagctcgggcgaggaggggggctcttgggaggaggaggagagccagggatctgtcgaggtgacgagaggcgggggtggagatcgcgaggctagggtttccgagagccgggacagcgcggaggtgaacggcggcgaggcggagagccagtcccttcccggctgccccatttgcatgaacgcgtggaccgcggatggcgcgcatcgccaagtattgtcattgagggagaaaaatgaatctcttgagaagcaaaatcaagaattggtccaggagataaatgagcacaagaggcagattatactgcagcaaaatttcataaatgaatcaagcttaaagagaaagaaaatggcagatcaatcatcacatggaacaacagatgcagattcagtagcatctcttacagcagatgatggtcatagcagtccttgcagttttgttctccagaacgagtttttccttgatggagctcgagtcatgggcatagatgcatcgagccagattatactcacttctggcagggcacctggaattggtgctgaacatgtcctcacaaaggctcctggctggtcctgttcaggcgatcaaaatagtccgaatcacatatatgctggactacagaatggcatgctgttgacctttgatattcgccaaactgttgcaccgttgcattccatgatgggtctatctacacaccctgttcatacgatccactctgttgtagatggcggtggttccaggaaggtcatttctgcatcttccataggaccctgcatctgggatgttgacgggagcagaaacaggccagatttgctaaatggaatggaaaaccacggagtctgcatctctcttgcgtgcaatcctccatcaagtgatctcctagtggcttccttccggccaaaagttgagctgtccgacgacggcacatctcaagccggcaaatcacagtcaccgacaccctctgcatcagggaagctaggctgccatgcactcataaggaggacgagcaacacgtccttcgccagagaccaaatctgcagaggcaatgtgagtggattgcgaatgtccaaatccgcaatcatacccttcaccggaagaagcaatcagcaacatctcttcgcctatggcgacgagtcgctgcgcggagtccggacatggcggctgccttcactccagacgtttgctgatctcaggccacaccggcaaccgatccttgatctgaggtttgcagagagctcgtcgacaggggaaaggtaccttggatgcttgagcgaggacaggctgcaggttttcagagtaaggtag</cdnaseq>

Protein Sequence

<aaseq>MEEAGDEEGEQGLRLGGVGDGADGEEEVARGVVAPQVLELSSSS SGEEGGSWEEEESQGSVEVTRGGGGDREARVSESRDSAEVNGGEAESQSLPGCPICMN AWTADGAHRQVLSLREKNESLEKQNQELVQEINEHKRQIILQQNFINESSLKRKKMAD QSSHGTTDADSVASLTADDGHSSPCSFVLQNEFFLDGARVMGIDASSQIILTSGRAPG IGAEHVLTKAPGWSCSGDQNSPNHIYAGLQNGMLLTFDIRQTVAPLHSMMGLSTHPVH TIHSVVDGGGSRKVISASSIGPCIWDVDGSRNRPDLLNGMENHGVCISLACNPPSSDL LVASFRPKVELSDDGTSQAGKSQSPTPSASGKLGCHALIRRTSNTSFARDQICRGNVS GLRMSKSAIIPFTGRSNQQHLFAYGDESLRGVRTWRLPSLQTFADLRPHRQPILDLRF AESSSTGERYLGCLSEDRLQVFRVR</aaseq>

Gene Sequence

<dnaseqindica>3703..4204#3437..3618#3285..3347#2350..2460#1609..1710#1475..1528#1121..1156#796..840#1..333#atggaggaggccggcgacgaggagggagagcaggggcttcgcctcgggggagtgggggacggcgccgacggcgaggaggaggtggctcgaggagtggtggcgccgcaggtgctcgagctgagctcgtccagctcgggcgaggaggggggctcttgggaggaggaggagagccagggatctgtcgaggtgacgagaggcgggggtggagatcgcgaggctagggtttccgagagccgggacagcgcggaggtgaacggcggcgaggcggagagccagtcccttcccggctgccccatttgcatgaacgcgtggaccgcggatggcgcgcatcgcgtaaggtgaggagattttttttttgtttttactaaattcgtggaattgcgccatatgcttctatgttttgattgttctcatgagtgcatatcttaagttgctaactgtgtgatgctgtatatctagttgcattccttgtgggcatgtctatggcagatcttgcttagagagatggttactgcagtgtcggaagaaacctgcgacagtatgttgttcaatgaatctagttctgaattatatatacaacctgtaatgttatttggagaactcctttgaatgaccccatgtttatgttttcagtgtccccaatgtggtaggaggtttaaactaaataacattatcaacctctatgcaccagagatttctgttccaaataatgatcttgaaaaggttagctttgcctcgtttcctttctttggaggtatttctgcccatgggctgaaacgtgtttgatttatgcagcaagtattgtcattgagggagaaaaatgaatctcttgagaagcaagtaagctactccttgtacagtattttgtacatgcttatacatgctttaacagaacattattttgtacgatgtggtgtgtaccttcgaaccgtttcagttcaatgtaataactactgactattttcatttccgcgaggaaaatgtaaatgttttgttgttggtttataggacactgttagctactgccatgaccctttcctataactattttatgcagctaaaatcgccacaagttccatgtatcttttctaacttaagctttcttaacattttgattcagaatcaagaattggtccaggagataaatgagcacaaggtacttacccaatttcttttgttatggtatcactttttttagaaggtgaatgatattttgactgcaaaccttgcatctaatttacataggaaaagaaatgcgacaagcatttttgtgtatagataatgtttgccaagcgtattcaacatttctttttttagcaaaggtctcccttgtatgtttccttaatccttatttaaatcaaagttgttagattaaatatcttttttttttttcattggcctttccagtgtcaggaaataaagttttctttccatggagcctcatgttttttcctttatgtttccttgtatgcagaggcagattatactgcagcaaaatttcataaatgaatcaagcttaaagagaaaggtagcttttcttaaatttttagtgattaaccatgattacacaagccttgatgttaacattctttacaacaaattgtgaagaaaatggcagatcaatcatcacatggaacaacagatgcagattcagtagcatctcttacagcagatgatggtcatagcagtccttgcagttttgttctccaggtttctctctagtctctatattttatgtttatctgggttccagcttctattattatattatacttgatcaatcaaactctagatctatttgctactccatttccatttggttgtgcctaatttagctatggtcatgtagtatgagcaggaatacttacgatgcatataacttgcttgtcatgccaacttcagcaatacggatgtttgagcagttcacaatcacctacagactacagaaagaaaaactggccagatttaatttattgctctattggacttataatttttcagtccaatactattccctggcttcctttcatgtattgcatacctcaataagcaagaaatattcacaagcgtgacaagacaatggttaaaaacctatacacgtgttgcaggaaaattgaccttttactcaatcttaggttaccctatcatttctggctatccatgcctttttctatcgaacagtttacggtcaaatagttgtaatctagattttgagtgggagctattgtaggtatgctcagggatggtataattattaaataggtattgagattttatcctccctgaatgttccattcacttttctttaatcaaagaactgcgttttgaaatggtaattatgttttgtagaacgagtttttccttgatggagctcgagtcatgggcatagatgcatcgagccagattatactcacttctggcagggcacctggaattggtgctgaacatgtcctcacaaaggtacatgttctaaacttgatgctttccctaatgattttatgtaacctatccttcttctgattatatttggtcgtttattcatattgtgtacctttaattcttaattttgacagctcagcatgtctagacagggattgcagaaaatccaccttccatctgatactaaagctatcagggatatctgtatactgcctgggggtcatgttgtttttgcatcactaggcaagaagttgtcacttttaaggtctatcttgaacatgttcaaattatttttttcacaacacatttactcagaagtttgatttttgttcttgtgttttatttcccagcatgacaactgaaagtgtcgtccttcattatgatctaccggtgattctttgaccttgcagtttcacaacattcgaaactattttttgttacctacttgttgattcgaaagtgctcaccaaaagttattcattcacaattttttgtggctaactccatctcccactttatttcatgaaagcacattctagatattatatatgcattttcttctcctggaggtgctattttggttgtcatgtcataaccctgaagctctttaaatatggaaatgcagcacgtttttcatgccaatttacattttaatctttacgagatcaccaagtttgcaatctttataatttgaagagtatatgcatattctttaaaaaaaagcatcatgatactttttttttctgacagagatgcatgtaaattttctttgccttgatctaaagctgttgagtgaaaaaaaatttgaatcttgacctgttattttggatttcattatcttgcaggctcctggctggtcctgttcaggcgatcaaaatagtccgaatcacatatatgctggactacaggttgagttttcagtatttcgtgcagttcttccttaaccattgtgtgctcttcgaagggttgactagaaatctctattgatgtttcacagaatggcatgctgttgacctttgatattcgccaaactgttgcaccgttgcattccatgatgggtctatctacacaccctgttcatacgatccactctgttgtagatggcggtggttccaggaaggtcatttctgcatcttccataggaccctgcatctgggatgttgacgggagcagaaacaggtatgaaacagttttaaaacttacaacaaagttcatagttctttgtggtttccaatgttcatttttgctagtgtttctgatcaggccagatttgctaaatggaatggaaaaccacggagtctgcatctctcttgcgtgcaatcctccatcaagtgatctcctagtggcttccttccggccaaaagttgagctgtccgacgacggcacatctcaagccggcaaatcacagtcaccgacaccctctgcatcagggaagctaggctgccatgcactcataaggaggacgagcaacacgtccttcgccagagaccaaatctgcagaggcaatgtgagtggattgcgaatgtccaaatccgcaatcatacccttcaccggaagaagcaatcagcaacatctcttcgcctatggcgacgagtcgctgcgcggagtccggacatggcggctgccttcactccagacgtttgctgatctcaggccacaccggcaaccgatccttgatctgaggtttgcagagagctcgtcgacaggggaaaggtaccttggatgcttgagcgaggacaggctgcaggttttcagagtaaggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0545600, RefSeq:Os10g0545600