Os05g0519500
| Gene Name |
Os05g0519500 |
|---|---|
| Description |
WD40-like domain containing protein |
| Version |
NM_001062599.1 GI:115464928 GeneID:4339341 |
| Length |
4712 bp |
| Definition |
Oryza sativa Japonica Group Os05g0519500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:25850058..25854769 |
| Sequence Coding Region |
25850556..25850726,25850814..25851041,25851134..25851478,25851951..25852322,25852502..25852594 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:25850058..25854769 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:25850058..25854769 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaactaccgcttccacaacctcctgggcgcgccgtaccgcggcggcgacgccgtcttcgccggtgactcctccgtcctcctctccgccgtcggcaaccgcgtcgcgtccaccgacctctccgcctcctcctccctcacgctccccttcgagtcctcctccaacgtcacccgcctcgccgtctccccctcgggcgacttcctcctctccgtcgacgacgccggccgcgcgctctacgccaacctcggccgccgcgccgtcctccaccggatcgccttcaagtccgccccctccgccgtccgcttcagccccgacggcaacctcatcgccgtcgccgtcggtaagctcgtccagatctggcgctcgcccgcgttccgcaaggagttcttccctttccacctgctccgcaccatccctggcttcgccgccggtgtcaccgccttcgactggtctcccgactcctcgttcctcctcgcctcctgcaaggacctcaccgcccgcctcttgcctgtcaagaaaggccttggaggcaaaccattcctcttcgttggccaccgcgccgccgtggttggcgccttcttcgccacagataagaagacagggagagtcactggggcttacacaattaccaaggacggagctatctttacatggaatttggtggaaggaagtgatgattcgcctccaccttcaccagggacgccagagcaggaggcggtacaggatggtgaggctgaattggacggtgacgagcccgaattggatggcgggagcaggaaaaggaagagtttcggagaatcggaagaaccagacactaccccgctgcatttcacaaggtgggagctgcagaaaaaggacttcttcatgcagtcaccggctaagttaacagcctgtgattaccatagggagcttgacatggtggtggttggtttctctaatggtgtatttgggctgtaccagatgccagactttgtgtgcctccacttactgtcaatatcaagggagaagatcactactgctattttcaacagtttggggaattggttagtttttggatgtgccaaacttgggcaattactggtgtgggagtggcgatcagagagctacattttgaagcagcaggggcactactttgatgtgaactgcattgcatactcaccagactcccaattactggccactggagctgatgataacaaagtcaaggtctggacagtctcctctgggttctgtttcataacattttcggagcatacaaacgctgttactgcagttcattttatggccaataatcattctcttctcagtgcctcccttgatgggactattcgagcatgggatctgttccgctatcgaaatttcaagacatttactactgcattgcccagacaatttgtttctttaacggcagatcagagtggagaagtaatatgtgctggaacacttgattcatttgagatatttgtttggtcaatgaagactggtcgtttgttggatatactcagtggtcaccaaggaccagttcatggcctaatgttttcgccaatcaatgctattttggcttcatcatcatgggacaaaacagttcgcctttgggacgtatttgagagcaagggtgcagtggaaacttttcaacattcacatgatgttcttactttggcttatcgccctgatggaagacagatagcatgcagcacactagatggcttaatccatttctgggatccatttgacggcctgttgatgtatacaattgaaggccgcagggatattgccgggggtcgtctcatgactgacagaagatctgctgctaatacaagtataggaaagtacttcacaacgttgtgctattctgctgacgggacttatattttagctggaggaaacagcaaatatatatgcatgtatgatgttggagaacaggtgctcttgcgtagattccagatcacccgcaatctctcgttggacggagtacttgattttctgaactcaaagaagatgacggatgctggtgcactagatctgattgatgatgaggatagtgatgttgaggaggggatcgatcaacaaacaagaggcaacttggggcttggtttgcctggttccatggcaaatcgtggaaggcccatagctcggacaaaatgcgtgaaatttgctccaacaggaagatctttcgctgcagcaaccactgatggtgttctattgtactctgttgatgattcttttatttttgatccaacagatcttgacattgatgttacccctgagaaagtggaagaagctcttgaggaaaaccaacagcaaagagcccttctactcagcctccggttaaatgaagactccttgatcaagaagtgcattttttcagtggatccatccaatgtacgagcaatttgttcatcaacacccttgaagtatcttcagagattaatcgaagcattttctgaccttttggaaagttgtccccatcttgaatttattctcctctggtctcaggagctatgcaagattcacggaaactatattcaacaaaactccagagccttgcttcctgctctgaagtcgtttcagaagtctataacaagaattcatcaggatttggccgacacttgttcttctaatgagtacatgttgaagtatctgtgctcttctgggacgaggaattag</cdnaseq> |
| Protein Sequence |
<aaseq>MNYRFHNLLGAPYRGGDAVFAGDSSVLLSAVGNRVASTDLSASS SLTLPFESSSNVTRLAVSPSGDFLLSVDDAGRALYANLGRRAVLHRIAFKSAPSAVRF SPDGNLIAVAVGKLVQIWRSPAFRKEFFPFHLLRTIPGFAAGVTAFDWSPDSSFLLAS CKDLTARLLPVKKGLGGKPFLFVGHRAAVVGAFFATDKKTGRVTGAYTITKDGAIFTW NLVEGSDDSPPPSPGTPEQEAVQDGEAELDGDEPELDGGSRKRKSFGESEEPDTTPLH FTRWELQKKDFFMQSPAKLTACDYHRELDMVVVGFSNGVFGLYQMPDFVCLHLLSISR EKITTAIFNSLGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCIAYSPDSQLL ATGADDNKVKVWTVSSGFCFITFSEHTNAVTAVHFMANNHSLLSASLDGTIRAWDLFR YRNFKTFTTALPRQFVSLTADQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHQGPV HGLMFSPINAILASSSWDKTVRLWDVFESKGAVETFQHSHDVLTLAYRPDGRQIACST LDGLIHFWDPFDGLLMYTIEGRRDIAGGRLMTDRRSAANTSIGKYFTTLCYSADGTYI LAGGNSKYICMYDVGEQVLLRRFQITRNLSLDGVLDFLNSKKMTDAGALDLIDDEDSD VEEGIDQQTRGNLGLGLPGSMANRGRPIARTKCVKFAPTGRSFAAATTDGVLLYSVDD SFIFDPTDLDIDVTPEKVEEALEENQQQRALLLSLRLNEDSLIKKCIFSVDPSNVRAI CSSTPLKYLQRLIEAFSDLLESCPHLEFILLWSQELCKIHGNYIQQNSRALLPALKSF QKSITRIHQDLADTCSSNEYMLKYLCSSGTRN</aaseq> |
| Gene Sequence |
<dnaseqindica>4044..4214#3729..3956#3292..3636#2448..2819#2176..2268#1824..2075#1..1206#atgaactaccgcttccacaacctcctgggcgcgccgtaccgcggcggcgacgccgtcttcgccggtgactcctccgtcctcctctccgccgtcggcaaccgcgtcgcgtccaccgacctctccgcctcctcctccctcacgctccccttcgagtcctcctccaacgtcacccgcctcgccgtctccccctcgggcgacttcctcctctccgtcgacgacgccggccgcgcgctctacgccaacctcggccgccgcgccgtcctccaccggatcgccttcaagtccgccccctccgccgtccgcttcagccccgacggcaacctcatcgccgtcgccgtcggtaagctcgtccagatctggcgctcgcccgcgttccgcaaggagttcttccctttccacctgctccgcaccatccctggcttcgccgccggtgtcaccgccttcgactggtctcccgactcctcgttcctcctcgcctcctgcaaggacctcaccgcccgcctcttgcctgtcaagaaaggccttggaggcaaaccattcctcttcgttggccaccgcgccgccgtggttggcgccttcttcgccacagataagaagacagggagagtcactggggcttacacaattaccaaggacggagctatctttacatggaatttggtggaaggaagtgatgattcgcctccaccttcaccagggacgccagagcaggaggcggtacaggatggtgaggctgaattggacggtgacgagcccgaattggatggcgggagcaggaaaaggaagagtttcggagaatcggaagaaccagacactaccccgctgcatttcacaaggtgggagctgcagaaaaaggacttcttcatgcagtcaccggctaagttaacagcctgtgattaccatagggagcttgacatggtggtggttggtttctctaatggtgtatttgggctgtaccagatgccagactttgtgtgcctccacttactgtcaatatcaagggagaagatcactactgctattttcaacagtttggggaattggttagtttttggatgtgccaaacttgggcaattactggtgtgggagtggcgatcagagagctacattttgaagcagcaggggcactactttgatgtgaactgcattgcatactcaccagactcccaattactggccactggagctgatgataacaaagtcaaggtgtgtgttacaagcagtgacatttgcactcactattatacgctcattctagttggcgatggaggaaatttattgttttatgtcattcaaaaaatgaaaacatcttttacggtagtactagatagtgtttttagttttgatgaagagatatttcaagtaaagaaatcaattcatgaatgttatgtgggtagtagaaagcagtcgctctgcctctgagctaatacttatgtgaagcatattaatgtcaactgaagattatagttgtctatctatagaattagatgataataaaaatgatatagttatatattatgaccttctatgttagtactacctccgttttttaatagatgacgccgctgactttttctcacatgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttatgagttgttttatcactcatagtactttaagtgtgatttatatcttatacatttgcataaaatttttgaataagacaaatggtcaaacatgtgagaaaaaatcaacagcgtcatctattaaaaaacggagggagtattagtatactgcaccctgagtttgacacataccacttatgatgtattgcaggtctggacagtctcctctgggttctgtttcataacattttcggagcatacaaacgctgttactgcagttcattttatggccaataatcattctcttctcagtgcctcccttgatgggactattcgagcatgggatctgttccgctatcgaaatttcaagacatttactactgcattgcccagacaatttgtttctttaacggcagatcagagtggagaagtaatatgtgctggaacacttgattcatttgaggtgtgtgtgtgaagtcaacctttttgctgcagtttttttccccgtgcatatgcttctctttttctctcatttttttgactgtcaaaacatcttcatgcagatatttgtttggtcaatgaagactggtcgtttgttggatatactcagtggtcaccaaggaccagttcatggcctaatgttttcgccaatcaatgtaagagcgcatgttttattctacccctgttttatttcctgcctgtcaaacattactaaatataaactactttagtacaaacactggtacacaatctctttttgctcaatctgctgcgttgtctactctatatgttgtgtaaatccacagaaagagttaaactgaattctgtctggtaggctattttggcttcatcatcatgggacaaaacagttcgcctttgggacgtatttgagagcaagggtgcagtggaaacttttcaacattcacatgatgttcttactttggcttatcgccctgatggaagacagatagcatgcagcacactagatggcttaatccatttctgggatccatttgacggcctgttgatgtatacaattgaaggccgcagggatattgccgggggtcgtctcatgactgacagaagatctgctgctaatacaagtataggaaagtacttcacaacgttgtgctattctgctgacgggacttatattttagctggaggaaacagcaaatatatatgcatgtatgatgttggagaacaggtcaggaaagttttcttatgatgataatggctttttagtatatacacacatcatccattttaaaacttaattttagagctgcatccatttttttaatcgtgtgtactctctacaattccatcattgtctgtaactaatttctatctggtgtttgtattttgttaattgatctggagagcaccctctatactctgatttatttttgtggattttagtagctctctgccttggaacgatcttcttacagtttctgctcgttctgttttgtcatttgaatgttgttttatagatgtctagctcaaacttagaatgtcttaccacatgtccttgttgacatatagttagtttagttattggcacatgtccttgttgacatagttagtttagttattggtgttattttgcacatgtttttcttttctgtcctaattgttgaaatatcattgtttttatgtacccatcacttttgtaggtgctcttgcgtagattccagatcacccgcaatctctcgttggacggagtacttgattttctgaactcaaagaagatgacggatgctggtgcactagatctgattgatgatgaggatagtgatgttgaggaggggatcgatcaacaaacaagaggcaacttggggcttggtttgcctggttccatggcaaatcgtggaaggcccatagctcggacaaaatgcgtgaaatttgctccaacaggaagatctttcgctgcagcaaccactgatggtgttctattgtactctgttgatgattcttttatttttgatccaacagatcttgacattgatgttacccctgaggtatttaccatatgttctttcttattagtagttctgttccaattatactaatcaatttgaaaaataaaattttgcacatgatgcttctgtagaaagtggaagaagctcttgaggaaaaccaacagcaaagagcccttctactcagcctccggttaaatgaagactccttgatcaagaagtgcattttttcagtggatccatccaatgtacgagcaatttgttcatcaacacccttgaagtatcttcagagattaatcgaagcattttctgaccttttggaaagttgtccccatcttgaatttattctcctctggtctcaggtaccattattgttctctatattgttattgaagctgatgatttgatgggaataccagattaatctaattctaatatttttgttacaggagctatgcaagattcacggaaactatattcaacaaaactccagagccttgcttcctgctctgaagtcgtttcagaagtctataacaagaattcatcaggatttggccgacacttgttcttctaatgagtacatgttgaagtatctgtgctcttctgggacgaggaattaggttatggttgagaaatgctgacaatgtgagtatttcttttttgccgatcattacattttgaatgtcacaaaaaatatagtataaatgattatcaagtttgtcaaaacaaagatatctgcaagagatgttttaacgttattgcagtcaatactattgcaggaaagtgttaactgagcagcagcacatcatcaggcaccagctgagtactggccatctgtactggacgcgattctccgcgctgcagtcctcgccacaactcgtcggccgaagagcgagtcgacctgaggcttcgtcaggcagtgtgttgctttttttgcccaaaagatggaccctctcgtcgaccatgaaaattttccttgttgcctggtgtacttttccttgttggatcttggatgatgtgtgtacacaccttactgaaattttgtcacccagttttgttgaaacgatccagaaagaatatatcatgcatcacaagtatggagtacttgtgggtttcct</dnaseqindica> |
| External Link(s) |
