Os10g0580300

From RiceWiki
Revision as of 21:13, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0580300

Description

Protein kinase-like domain containing protein

Version

NM_001072044.1 GI:115483683 GeneID:4349519

Length

4342 bp

Definition

Oryza sativa Japonica Group Os10g0580300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:23604167..23608508

Sequence Coding Region

23604297..23604371,23604461..23604667,23604980..23605088,23605202..23605234,23606121..23606168
,23606291..23606368,23606454..23606538,23606632..23606665,23606959..23607053
,23607139..23607208,23607430..23607528,23607617..23607659,23607806..23607909
,23608015..23608125,23608210..23608446

Expression

GEO Profiles:Os10g0580300

Genome Context

<gbrowseImage1> name=NC_008403:23604167..23608508 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:23604167..23608508 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggacggccgcgtcggaggtggaacgaatcggccggcatggctgcagcaatacgaactagtgggcaagattggcgaggggacctacggcctcgtcttcctcgctcgcctcaaacaatcgcatccccacgctgccgctggcgttggccgccgtggctctcccatcgccatcaagaagttcaagcagtccaaggagggcgacggtgtctcgcccaccgccatcagagagatcatgcttctgcgtgagatcaaccacgagaatgttgtcaagctcgtcaatgttcacatcaaccacgccgacatgtccctctacctcgccttcgattacgccgagcacgatctctatgagattatcaggcatcacagagagaagcttaacctccccataaatccctacacagtcaaatctttgctctggcaactgctcaatggtctcaactatctccatagtaactggattatccatcgagatctcaagccttctaatatactggtcatgggagaaggagaagaacatggaattataaagattgctgattttggactcgctaggatatatcaagctccattaaagccattaagtgataacggggttgttgttaccatctggtatcgggctccagagttgttacttggggcaaagcactacacaagtgctgttgatatgtgggcagttggttgcatttttgctgaattgcttacactcaaaccactgttccaaggtgttgaagccaaagctactccaaacccgtttcaacttgatcaactagacaagatttttaaggtcttaggtcatcctaccgttgagaaatggcctaccctcgctaatcttccatgctggcaaaacgatcaacaacacattcaagggcataagtatgagaacacaggacttcataatattgttcacttgcctcagaagagtcctgcgtttgatcttctctcaaaaatgctcgagtatgatcctcgaaagcgtataacagctgcgcaagctttggaacatgagtactttcgaatggatcctctgcctggacggaatgcacttttaccatcgcaggctggagagaaaattgtgcaatatcctgtgcgtccagttgataccacaactgattttgaaggaacaacaagccttcaaccaactcaagcgccatcagggaacgcagctcctggcaaccagtctgtggtaccgagacccattccgaggcaaatgcaacaacccatggtcggtatgtcgagaatgggtggtacaaacatggcggcctttggtgcagctccgcaaggaggcatagctgggatgaatcctggtaatattccaatgcagaggggcgctggagcccaatctcatccgcatcagttgagaaggaaagctgatcaagggatggggatgcagaaccccggttatcctactcaacagaagaggcggttctga</cdnaseq>

Protein Sequence

<aaseq>MGDGRVGGGTNRPAWLQQYELVGKIGEGTYGLVFLARLKQSHPH AAAGVGRRGSPIAIKKFKQSKEGDGVSPTAIREIMLLREINHENVVKLVNVHINHADM SLYLAFDYAEHDLYEIIRHHREKLNLPINPYTVKSLLWQLLNGLNYLHSNWIIHRDLK PSNILVMGEGEEHGIIKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYT SAVDMWAVGCIFAELLTLKPLFQGVEAKATPNPFQLDQLDKIFKVLGHPTVEKWPTLA NLPCWQNDQQHIQGHKYENTGLHNIVHLPQKSPAFDLLSKMLEYDPRKRITAAQALEH EYFRMDPLPGRNALLPSQAGEKIVQYPVRPVDTTTDFEGTTSLQPTQAPSGNAAPGNQ SVVPRPIPRQMQQPMVGMSRMGGTNMAAFGAAPQGGIAGMNPGNIPMQRGAGAQSHPH QLRRKADQGMGMQNPGYPTQQKRRF</aaseq>

Gene Sequence

<dnaseqindica>4138..4212#3842..4048#3421..3529#3275..3307#2341..2388#2141..2218#1971..2055#1844..1877#1456..1550#1301..1370#981..1079#850..892#600..703#384..494#63..299#ggcgggttcggctggatcttttgttcccccttttcctttcttctccggcagcggcggcggcgatgggggacggccgcgtcggaggtggaacgaatcggccggcatggctgcagcaatacgaactagtgggcaagattggcgaggggacctacggcctcgtcttcctcgctcgcctcaaacaatcgcatccccacgctgccgctggcgttggccgccgtggctctcccatcgccatcaagaagttcaagcagtccaaggagggcgacggtgtctcgcccaccgccatcagagagatcatggtaccttcctcagggagatccgctttccctactcctccctgccataccaaaccctaactaatcactagtcttctcctcttgcagcttctgcgtgagatcaaccacgagaatgttgtcaagctcgtcaatgttcacatcaaccacgccgacatgtccctctacctcgccttcgattacgccgagcacgatctctatgtaagcagcaacgcccatctccaatcttctctcttatctattgtacagtagtaatcatttgtttactccagttaacagctaatgaacctatgaaacatatcacaggagattatcaggcatcacagagagaagcttaacctccccataaatccctacacagtcaaatctttgctctggcaactgctcaatggtctcaactatctccataggtatcgtttacttcttaagttatcatgatgagtgatatgtaaaaactggagcctaacctagcacatggaactttttttgctgggatcctagcttattctgattttgtctccaaaaagaaatctaaaaattgatttcccttcctcagtaactggattatccatcgagatctcaagccttctaatatactggtatgttgtcatatgctaccttttgatgtacaactctgtcaatcttgcttttcctggctcaccggattaggatgatgtgccccaataggtcatgggagaaggagaagaacatggaattataaagattgctgattttggactcgctaggatatatcaagctccattaaagccattaagtgataacggggttagtacatccatctgtgtgcccattagcatgtttgctgctgtcttgtgtttatttcaaggcatataagggcaaaaaatggtagttatttgtaaaactactgcttgtttcctcttttttgtgatgaaccttcatatgctcatctgttcctttccttttttgtggaagcatttaatgtgttatcaatacccacaagtatatggctaaccaataatttccaggttgttgttaccatctggtatcgggctccagagttgttacttggggcaaagcactacacaagtgctgttggtatccttgctggagattgaaatgatatctttcgaccatcttttttcgctttattcacttcagctatttccttaatcaactctagatatgtgggcagttggttgcatttttgctgaattgcttacactcaaaccactgttccaaggtgttgaagccaaagctactccaaacccgtttcaagtatgggcattcacactcaagtaattgctatcgttaccttgtattcagaatcaattactagatactagactaagactgcgacattttacgttttctatgtgatgcttaatttcaagtaaagatattatcactcttgcctggaaccttcctaaaagtaaataggcagttgataattgtatgttgttgcattttatatatcctgctgtattacattttgtagaatatccatgctatgtatgccattcatttgccatttatttttatctcacagttgatttgcccatgtcttgtagcttgatcaactagacaagatttttaaggtcttaggtatggatgactcatttctcattctgactatttgattgtgtactcttcctgagataatatatgctctaggataataatataattattctccaggtcatcctaccgttgagaaatggcctaccctcgctaatcttccatgctggcaaaacgatcaacaacacattcaagggcataagtagtatgtcatgcattgttaagctgcttttaaaaacctgtgaaaatagcatttatctttccttgaggaaatagtttctcccttgcagtgagaacacaggacttcataatattgttcacttgcctcagaagagtcctgcgtttgatcttctctcaaaaatgctcgagtatgtaactggccttttggcctgctataaatccaacataaccttggatgattatcatttcttacattcatcttttgtactactaaatgttgttttaataaccttatatattcctgtttcaggtatgatcctcgaaagcgtataacagctgcgcaagctttggaacatgagtaagtaactacatccctccatttattcattattccttttttgcctagttggatacttcttatgttctcagtgtacagcaagtgcgatctggagttctaattgcttccctgaatctagtttagcaaccatgcaagaaaaacagttatgctttatttgcacgaggttttgatacttggacgaggtcttgatggtcctcagttggagctgattttgtggggtgggctggagtggtggtggtagtggtgtggcttaaagggtgtaaaattgccaagaccatctgtttagagtggctaacggtcaatttttccttgtaaatatttgtgcatcctaaaccttatatattttactttaaaaatataaatatatgcaatccttagtttgattcgctatacttctaaatgttttcatctctagtggcttggatgaaggtttaatgctgaaaactcgaggaaatactactttcgttgtggtgctattgtttattactccctctgtttctttttgtaaggctataggccctctgtttctttttgtaaggctatagtcttccctcttcctctgtttctttttgaaaggcctagagttttttcaatcattttgcaaaatataaggcttgcatgttggtattgaatttttttttctttatgtgcccacaattattacatagtctctctcccacatttataagaagcatcttactaaccatctccacacctattcttgaggtattttagtatggtggcatggtcatttgaactcttctttctcttggttttccaccctccctaatcatttttgcccactcagaataagacttgtaattttaaatggagggagtatgatttactacagcaatccttctgaacaacccttttctgttgataggtactttcgaatggatcctctgcctggacggaagtaagttatgtgtaatcagggtcttaatatactttccctaacttgcaactcttaaacatttggctttacatttcctccacaaatgaagatgactaaaatctttctctggtcagtgcacttttaccatcgcaggctggagagaaaattgtgcaatatcctgtgcgtccagttgataccacaactgattttgaaggaacaacaagccttcaaccaactcaagcggtaatggatttctgtccctgtgccacctttttaccaagacttatcagtattacttagtattgggaagcgatatacagaatatgcattttctttggtcaattatctaagttctttatacagttggcaaaaatatcgtgctttagggcatattcaattggtcaaaacaagtcgatacatggttttcaatgccatcaaagatttggtccagtgtgatttaaggaacccaactccatgttggcacattttcttgcagaattgattcgggttgctttatgaggtgcatttttataatgttgtacatttgtatttcagccatcagggaacgcagctcctggcaaccagtctgtggtaccgagacccattccgaggcaaatgcaacaacccatggtcggtatgtcgagaatgggtggtacaaacatggcggcctttggtgcagctccgcaaggaggcatagctgggatgaatcctggtaatattccaatgcagaggggcgctggagcccaatctcatccgcatcaggtaaaaactgctgccttggaagtaaatgttgcttggaaaaaggcctgtgacaaatgcaacatttgattggcttttgatatgtgcaacagttgagaaggaaagctgatcaagggatggggatgcagaaccccggttatcctactcaacagaagaggcggttctgaccgactgaatttgtaattgtatatctatttggtgtgttacttgtgagcacgcttagcttttgcggtggttgctcctagtcgtacagtgagaattgtatctgttctgttgtaattgaacgccatcacaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0580300, RefSeq:Os10g0580300