Os05g0524300

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Revision as of 10:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0524300| Description = Similar to Mitochondrial processing peptidase| Version = NM_001062624.1 GI:115464978 GeneID:4339368| Length = 4295 b...")
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Gene Name

Os05g0524300

Description

Similar to Mitochondrial processing peptidase

Version

NM_001062624.1 GI:115464978 GeneID:4339368

Length

4295 bp

Definition

Oryza sativa Japonica Group Os05g0524300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26163222..26167516

Sequence Coding Region

26163377..26163622,26163702..26163998,26164079..26164246,26164336..26164503,26164591..26164671
,26164839..26164905,26165009..26165106,26165722..26165794,26165888..26165958
,26166054..26166103,26166833..26166945,26167032..26167084

Expression

GEO Profiles:Os05g0524300

Genome Context

<gbrowseImage1> name=NC_008398:26163222..26167516 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26163222..26167516 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtaccttttgttatcgactttcagcatcatggtgctagtaggtttgctagtacaagtgttgtgaagcagtcttcaggtggtctgcttggctggtttcttggtggtaactcaagccagcttcctccgcttgatgttccactcccaggcgttataatttctccacctctgccagattttgtagagccatctaagacaaagatcaccactcttccaaatggcatcaagatcgcatcggagacatcaccgattccggctgtatcagtgggactgtacattgattgtggttctgtttatgagacatcttcttcatctggaacatcacatctattggagagaatggccttcaagagcacgacaaaccggagtcacttgcggttagttagggaggtagaagccattggaggaaatgtctttgcatctgcttctcgcgaacaaatgagctatacttatgatgcactgaagtgttatgcaccagaaatggttgaagttctcatcgacagtgtgaggaacccagcatttttagaatgggaggtcaaagagcagctccagaagataaaatctgaaatatctgaagtgtctggtgatccacatggtctacttatggaagcgctccattcggctggatattctggggctctggcaaaacctttgatggcttcagaatccgcggtgaacagattggatgttgctaccttggaggaattcgtttctgaaaactacactgcccccaggatggtacttgcagcatcaggaattgagcacgatgagttggtttcagtcgcagaaccacttctatcagaccttcccagtgtgaaacgtcctgaagagccaaaatcagtgtatgtaggaggggattatcattgccaagcagattctacaagtacacacattgcacttgcctttgaggttccaggtggctggcgtcaagagaaaactgcaatgattgtgactgtgcttcaggtgctcatgggtggaggagggtccttctcgaccggtggccctgggaaaggaatgcattcttggttgtatctccgtgtcttgaacaattatggacagatcgaatcattctctgctttcagcagtatttacaacaattctggcctttttggaatacatgcaaccactaacccagattttgtatcaagtgctgtggatttggcagcaagggaactccatgaagttgcaactcctggaaaagttacacaagaacaacttgatcgtgctaaagaggctaccaagtcttcagttctgatggacttggaatcaagaatcgtggcctctgaagatattggaagacaggtactgacttatggtgaaaggaaacctattgagtacttcctgaaaactgttgaggagatcactttaaatgacatttcttcaactgcaaagaagattatttcttcgccgcttacattggcatcatggggtgatgttattcatgtgcctagctacgaatctgtcaggcgcaagttccattccaagtga</cdnaseq>

Protein Sequence

<aaseq>VPFVIDFQHHGASRFASTSVVKQSSGGLLGWFLGGNSSQLPPLD VPLPGVIISPPLPDFVEPSKTKITTLPNGIKIASETSPIPAVSVGLYIDCGSVYETSS SSGTSHLLERMAFKSTTNRSHLRLVREVEAIGGNVFASASREQMSYTYDALKCYAPEM VEVLIDSVRNPAFLEWEVKEQLQKIKSEISEVSGDPHGLLMEALHSAGYSGALAKPLM ASESAVNRLDVATLEEFVSENYTAPRMVLAASGIEHDELVSVAEPLLSDLPSVKRPEE PKSVYVGGDYHCQADSTSTHIALAFEVPGGWRQEKTAMIVTVLQVLMGGGGSFSTGGP GKGMHSWLYLRVLNNYGQIESFSAFSSIYNNSGLFGIHATTNPDFVSSAVDLAARELH EVATPGKVTQEQLDRAKEATKSSVLMDLESRIVASEDIGRQVLTYGERKPIEYFLKTV EEITLNDISSTAKKIISSPLTLASWGDVIHVPSYESVRRKFHSK</aaseq>

Gene Sequence

<dnaseqindica>156..401#481..777#858..1025#1115..1282#1370..1450#1618..1684#1788..1885#2501..2573#2667..2737#2833..2882#3612..3724#3811..3863#ttaatctagttgggatatattacagccttggttgttgtcacatcattgtaatagtaacatcccattctacatctacttgatgtagtatattagtatcttctttgtgctgtgttgtttctctgtatcaattgacacattctatattatgaagataagtaccttttgttatcgactttcagcatcatggtgctagtaggtttgctagtacaagtgttgtgaagcagtcttcaggtggtctgcttggctggtttcttggtggtaactcaagccagcttcctccgcttgatgttccactcccaggcgttataatttctccacctctgccagattttgtagagccatctaagacaaagatcaccactcttccaaatggcatcaagatcgcatcggagacatcaccggtattgcttcatgcttccttatgttacaagatttttgtttttttcacatgattaactttttccagtgactcaatttcagattccggctgtatcagtgggactgtacattgattgtggttctgtttatgagacatcttcttcatctggaacatcacatctattggagagaatggccttcaagagcacgacaaaccggagtcacttgcggttagttagggaggtagaagccattggaggaaatgtctttgcatctgcttctcgcgaacaaatgagctatacttatgatgcactgaagtgttatgcaccagaaatggttgaagttctcatcgacagtgtgaggaacccagcatttttagaatgggaggtcaaagagcaggtgcatgatcattttgagcattatatttcgctaattttgcttcttttttactgattattatttgctaattgcttctacagctccagaagataaaatctgaaatatctgaagtgtctggtgatccacatggtctacttatggaagcgctccattcggctggatattctggggctctggcaaaacctttgatggcttcagaatccgcggtgaacagattggatgttgctaccttggaggaattcgtttctgtaagactaagttatttatcatgttaatagtcagtcacagatgcctctgtttcaccctttgacattcttgcttgtgctgagaaatgtaggaaaactacactgcccccaggatggtacttgcagcatcaggaattgagcacgatgagttggtttcagtcgcagaaccacttctatcagaccttcccagtgtgaaacgtcctgaagagccaaaatcagtgtatgtaggaggggattatcattgccaagcagattctacagtgagttggcctcttctattatcattctcaagggctcaagtctgtcttcacagttacttttcttgttcctaatgtattttttgttagagtacacacattgcacttgcctttgaggttccaggtggctggcgtcaagagaaaactgcaatgattgtgactgtgcttcaggtatgcctaacaatatgttgaagtgatccaattatttatggctaacctatatggtctgttgattctgtactatataggaattgatggattatttcatattttattgcgttgcaagctctattattcaaatctattgtactgaaacataagattaatataaattgtaggtgctcatgggtggaggagggtccttctcgaccggtggccctgggaaaggaatgcattcttggttgtgtaagcttaatgcttctcttttaaccattatgcatatcagagcatcaataagcatataccttggtaaagtgtcttaacatcagctgtgattctgtaccgacagatctccgtgtcttgaacaattatggacagatcgaatcattctctgctttcagcagtatttacaacaattctggcctttttggaatacatgcaaccactgtaagtctcttttggagcataaccaatgatatgttttcccttctatattcaagcaatgaacagaatcaaatctgcttgtgaattctttcccttttttttttgaatatcattctcaaactactgtaaatataataccctttctattctaagtaatgtctgtccctcttaccacaccattacatttgtcctacctgaattctggattaatgccttatacaaacaactgtaattttatcttactgtttaaaataaggagttggtggcttatgctagtaagtagtagtaactaaaaccgaagttatattgtacctcagtaagaaatgcagaaagcactcactgaaactgagtatttagtttcttcctatgtacatcaatgctcatttcatctcgtgtacaattttgtggtttcaaatgtttcaagagggtagtaactaataaatgcacatttcaggccagtaattatgccctggtctttaattataaccatccgaacagtcagattgaaatacaagtcaaaggctcaatgatttactcaagcttctatagaagtttctgcatttatcatggattttcatacattccactttgcttttgactgtcatgttaatttaacagaacccagattttgtatcaagtgctgtggatttggcagcaagggaactccatgaagttgcaactcctggaaaaggtttctttaattttttacctcaaagttacaatctattttcagattagactggtcattatgtgttgtcctttccctgtcttttactttgttcagttacacaagaacaacttgatcgtgctaaagaggctaccaagtcttcagttctgatggacttggaatcaagagtatgttgttcttactcctgatcaagttccaatcgcatgaatttcatgcttcttccctgaaatgtttttttaattgtacttcctccttatcgcagatcgtggcctctgaagatattggaagacaggtactgacttatggtgaaaggtatgcttataagtaatcgctagtacattaatggagtcaatttcctattaatccctatgttcctaattaaatagcatatttccatgtcatgtttatatgcatggaatgcaaatctttttactaatgtgcgtaaaataatgagtcatcaccatgaactatcacaatctatgtacgcttgcgtaaattattatgtttccaagctggttgggcaatatatgttgaccatattacataggcaactaaagttgtcttgtggttttttcctgcaatcatgtcccaaagtttgacaagtcacctataatactgtgttctggacacacttactgtggttgtggtgttccttttccaaagtgatgctgtggttatggtgtggtagatgcttttttatggtatcacccaaagtattttgggtgtcagactgccagcacgtccaagcatatattcaggatttatttctatagtttcttctgcgtgcccattggtgctataaacttattgtcatcaccatgccgttgcatctagaaaaggtgcacatacatggtagaagtgagccagaagttttagtaccatgaggcagaggttcatacatttgacgcatgcagcagtgctaaatctgttaagctagcattttttctaagtaatccagcaattgcatagggtattaatttagatagtcacttccatttgccagagaaccttgtttatcttggagtgctttgtgttgtgcaggaaacctattgagtacttcctgaaaactgttgaggagatcactttaaatgacatttcttcaactgcaaagaagattatttcttcgccgcttacattggcatcatggggtgatggtatgtcgaaacttggaagttaaagcatggccctatgcaagctctgagagtctgagcactgactaattgaaacgctcgtgttgcagttattcatgtgcctagctacgaatctgtcaggcgcaagttccattccaagtgagcattcagcacctggacctgcgtgggttgttctggaatttcaagccgcagctttgcagtggccaaatggccatcgactggaataaatagagcccatacacaatttttgctggacagatgaggggtgcatgatcaactaccctccctattcatgttctcaactaagcatgtgatcatgctgccacaattccgcggcccctaaatcattcggcggcatgctgcgttttgttcagtggcatgctgcgtttttgttcagacgcacgccaatatcgtccttcctgttttacattttaatatagaatcagatgttatggcctcatggttaagccatttgcctattcatcggtgtcaggtgttttttttattagcgtgtttgcccatttgtaccaacaagctgtaaacatatacgagtaaaaagagtatttctatttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0524300, RefSeq:Os05g0524300