Os05g0524400

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Revision as of 10:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0524400| Description = Phosphofructokinase family protein| Version = NM_001062625.1 GI:115464980 GeneID:4339369| Length = 5204 bp| Definit...")
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Gene Name

Os05g0524400

Description

Phosphofructokinase family protein

Version

NM_001062625.1 GI:115464980 GeneID:4339369

Length

5204 bp

Definition

Oryza sativa Japonica Group Os05g0524400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26168441..26173644

Sequence Coding Region

26168641..26168958,26169602..26169648,26169747..26169786,26169868..26169930,26170016..26170153
,26171008..26171166,26171246..26171299,26171459..26171527,26171649..26171778
,26172044..26172084,26172268..26172492,26172695..26172740,26172837..26172988
,26173157..26173378

Expression

GEO Profiles:Os05g0524400

Genome Context

<gbrowseImage1> name=NC_008398:26168441..26173644 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26168441..26173644 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcctcccacatcatccttccgccggacgacgacgacgaggagcagcgccggctggaggaggaggaggacgaggatccgtgggcgcggagcgggcctccccccgcggcgccggagcacgcgatgaaggcggcgctgccgttctccgcgacgtgcgtgcggatctcccgcgactcctaccccaacctccgcgccctccgcaacgcctcctccgtcagcctcgccgacgccgcctacgtgaagatctccgagggggacttcggctacgtcctcgacgacgtgccgcacctcgtcgaccacctccccgatgcccccacttatcccaatccactacaagatcatccagcctattcaactgtcaagcaatattttgttaatgaagatgacactgtaccccaaaaggtggtcgttcagaagaacagccggcggggggttcacttccgtcgtgctggacctcgtcagaaggtttattttgagtcagatgaagtgaaagcatgcattgtaacttgtggaggcctttgccctggtcttaacactgtcatcagagagctcgtctgtggtttggcgcacatgtataatgtcagcaaaatctatggtatacagaatggatacaagggcttctattctagcaattaccttactctgacgccaaagagtgtcgatgacatccacaagaggggtgggacagttcttggcacatcacgaggtggccatgatacaaaaaagattgttgacaacattcaggatcgtggaattaatcaggtctatatcattggaggagatggaacacagaagggtgcatatgagatcttcaaggaaatccgaaaacgtgggctaaaggtttctgttgctgggattcccaagacaatagataatgacatagcgatcattgacaagtcatttggttttgatacggccgtagaagaggcccagcgtgccattgattcagctcatgtggaagcttgcagtgctgagaatggaataggcttagtaaaactgatgggccgttatagtgggttcattgcaatgtatgctactcttgcaagtcgagatgtggactgctgcttaattccagagtccccattttatatggatggtgaaggtgggttgcttcaatatgtagagagaaggctgaaagagaacaagcacatggttattgttgttgctgagggagcagggcaggatcttatagccaaaagtttatctacttctgagcagcaagatgcatcaggaaataagctactgcttgatattggtctttggctgactcacaagataaaggaccacttcaagagcaaaaagatggagatgactattaaatatatagatcctacctacatgatccgagctattccaagcaatgcatcagacaatgtctactgcacgctgctggcccacagtgctattcatggtgcaatggccggctatagcttcactgttggaaatgtcaacggcagacatgcctacatacctttctatagggtgacatccacacggaacaaggtcaagatcactgataggatgtgggcgaggctgctatcatcaaccaaccagccaagcttcctaagccagaaggacatcgacgaagccaaagagaacgataggacggccaacaagccaccacttcccaccggcctcagccatcatgtggcaaactctttcgaccagtctgcatcatcttcgtcgaacagccagatatga</cdnaseq>

Protein Sequence

<aaseq>MASSHIILPPDDDDEEQRRLEEEEDEDPWARSGPPPAAPEHAMK AALPFSATCVRISRDSYPNLRALRNASSVSLADAAYVKISEGDFGYVLDDVPHLVDHL PDAPTYPNPLQDHPAYSTVKQYFVNEDDTVPQKVVVQKNSRRGVHFRRAGPRQKVYFE SDEVKACIVTCGGLCPGLNTVIRELVCGLAHMYNVSKIYGIQNGYKGFYSSNYLTLTP KSVDDIHKRGGTVLGTSRGGHDTKKIVDNIQDRGINQVYIIGGDGTQKGAYEIFKEIR KRGLKVSVAGIPKTIDNDIAIIDKSFGFDTAVEEAQRAIDSAHVEACSAENGIGLVKL MGRYSGFIAMYATLASRDVDCCLIPESPFYMDGEGGLLQYVERRLKENKHMVIVVAEG AGQDLIAKSLSTSEQQDASGNKLLLDIGLWLTHKIKDHFKSKKMEMTIKYIDPTYMIR AIPSNASDNVYCTLLAHSAIHGAMAGYSFTVGNVNGRHAYIPFYRVTSTRNKVKITDR MWARLLSSTNQPSFLSQKDIDEAKENDRTANKPPLPTGLSHHVANSFDQSASSSSNSQ I</aaseq>

Gene Sequence

<dnaseqindica>201..518#1162..1208#1307..1346#1428..1490#1576..1713#2568..2726#2806..2859#3019..3087#3209..3338#3604..3644#3828..4052#4255..4300#4397..4548#4717..4938#gacccctcgctgacgctccgaccccaccaccaccaccgccgctcactcacacatcgagcgccattattaaaccccaggaaaaacagacgacctcgttcgcttctcgcccgcaaaaggctaaacctcgattacgcctccccaaacccgccgcgaaacgaagcgaaagcgagttcctccgatcccgaccacttgctcttctcatggcgtcctcccacatcatccttccgccggacgacgacgacgaggagcagcgccggctggaggaggaggaggacgaggatccgtgggcgcggagcgggcctccccccgcggcgccggagcacgcgatgaaggcggcgctgccgttctccgcgacgtgcgtgcggatctcccgcgactcctaccccaacctccgcgccctccgcaacgcctcctccgtcagcctcgccgacgccgcctacgtgaagatctccgagggggacttcggctacgtcctcgacgacgtgccgcacctcgtcgaccacctccccgatgcccccgtgagtggccccctcccgacactcccttcccgttgcttcgattcgcaagctgctgctgcggtgatgctccgatcgttccggtttgtgatggcctttgcgttgttgaactgtgccactgtgtgaagtgcagctctagctaagtatactcgaatagcgaagtgatctgggtggggatccctgattgggggctgtcatttgcgatgtttgcgggatttttttctatcagattttctggtttggaaatccattttggatactgtgctgattttagactgtcgaatttgagcttggacatgcagtgagccaattagtctgttaggagcgaaagggggcatgatagaacagagcaattaagttgtcaaaatttcgctgcaatgctattgacgctttatgttatgtagtaacagaataagttgttgctttgggctttttggtctctgcttttgggataggaaatttgattgagtagattggaggatatctccactggaagaactgtcactattggctggttgcttatcactgccaaagcatgagttagttatagccaattcactgtgctggattgaattgtttctggaaaggtgaaaccatggtccatgtgaattgagctgatgatttgctattttgttcatatgtgcagacttatcccaatccactacaagatcatccagcctattcaactgtcaagtaaggctttgatcttccactttttttcttcttctaatatctgagcttgtaatttgtgccatgtgtaatcctgaaacttttgttcttatcgttatcaggcaatattttgttaatgaagatgacactgtaccccaaaaggtaaagcagtgttaattatggtttacactgtgatgttgtagtcgatggtgaatttacaggtagctatttctgtgcttacaggtggtcgttcagaagaacagccggcggggggttcacttccgtcgtgctggacctcgtcagaaggtatgatatgctgccccctcttttaactattgaaactcatcacttgcgcgtgggctaacagaaacatttggacttgaacctttaggtttattttgagtcagatgaagtgaaagcatgcattgtaacttgtggaggcctttgccctggtcttaacactgtcatcagagagctcgtctgtggtttggcgcacatgtataatgtcagcaaaatctatggtatacaggtgtgggcccttctctaaatggttacataatacttcaatagatagttaagggcttgttcactttgctaccattttcaaccttaccaagttttggcattgttaaattttggtagccaaaattttggcaacatttcatatgcacttactaaaatttggcaacaaactaaacgtagccaaaattttggtaactttgccaaaaaatagtatggttaaaaatagcatcaaagtgatcaggcccttacagtatcatattttttcactgagaaagacagcttgcgcatgttaaggacctgttcactttgatgctattttcaaccttaccaaattttggtaaagttgccaaaaaagtggctacatttagtttactgccaaattttggtaactatataagaaatcccgccagttgctaaaatttggtaaggttgaaaatggcatcaaagtgaataggccctaaatactctagttaaatactactcttgcattttccagacatgcttgatccatctttctaatttttctttggtccagaaaggatatgccagcttaccataagatcttcagattcttatcactgcttatcaatcattttgtattgcataatgtccatttccataaatattcaaaccttatagtattattctactaaaatagtggcaaattgaataagctgctttggattgttttagtaaaatgcaattataaatttgtatacttgtattataagtttagaacaatggatatgtgttctgacaagggcttgccatggcaactataaacatgaatcattactgcgttcagttctcattatatttccagatcttctacctcttaataccttatattacctatcatagaatggatacaagggcttctattctagcaattaccttactctgacgccaaagagtgtcgatgacatccacaagaggggtgggacagttcttggcacatcacgaggtggccatgatacaaaaaagattgttgacaacattcaggatcgtggaattaatcaggtaaatgcggttgtttgcacctatgtgatatagctcttctgattggtcattgtctcatgtgcttatgtacattacccaggtctatatcattggaggagatggaacacagaagggtgcatatgagatcttcaaggtaatttaccactgtggtacaaccgtacaagtgctatgtatgctgtttgctgaaagaatgtgataatagatcctattcatcaatgcattgcagtagcatacggtatatctatttaaatattattttatcgttacctcattgttttcatattggtggcaggaaatccgaaaacgtgggctaaaggtttctgttgctgggattcccaagacaatagataatgacatagcggtattttttttgtgcgatgtgtctatttttgtgtagaaatttgttgtacgcatgctgttcagttgacggttcatacgagattatgacttattgcttatgttacctttttcttgattcttagatcattgacaagtcatttggttttgatacggccgtagaagaggcccagcgtgccattgattcagctcatgtggaagcttgcagtgctgagaatggaataggcttagtaaaactgatgggccgttatagtggtacgtattttagtattccttgccatctctctgagtgtaatgctgttatgtttcttccattgttgaccttgctgaaagcacctatcagtttaaaaattacaagaaaaaacaagccagcattttggccttttgcctgtgattgtactcatgcagaagatctcttgatttttctgtatttcaagcttgaatgcttgattactctgctatctgttctctagtatgtatttcagtctattgcccttaaactgttatattcatcttgcagggttcattgcaatgtatgctactcttgcaagtcgagatgtggtaagcagatgcaaccattctgtctaattcctgtatattttatcccccctcttcatacagtagtgagattcctacttttctggtttaccccacaaatctacttctacctaagagtagttttttttttccgaggtctacctaagagttgtacttatttattttttggatctcaaatctccacaggactgctgcttaattccagagtccccattttatatggatggtgaaggtgggttgcttcaatatgtagagagaaggctgaaagagaacaagcacatggttattgttgttgctgagggagcagggcaggatcttatagccaaaagtttatctacttctgagcagcaagatgcatcaggaaataagctactgcttgatattggtctttggctgactcacaagataaaggtacacaaaacacttaattttgcttctgaattcaggtctgctgctcttgttaatataggtaactaaaacactaagcaattcccactgaaaactgtgatgacttttgccatacagttcactttgactttcaagtatcactccttttactcacttcttgcatgcatctttttcttctactcactattcataacttctattgtaggaccacttcaagagcaaaaagatggagatgactattaaatatataggtaactatgtttgcttcacacaggataaggttgttacacatcttattactggtctctattgtactaagttgtgaagttccctattattatttgcagatcctacctacatgatccgagctattccaagcaatgcatcagacaatgtctactgcacgctgctggcccacagtgctattcatggtgcaatggccggctatagcttcactgttggaaatgtcaacggcagacatgcctacatacctttctatgtgagtaacttcaagtgatcttatttgttcacatggaaaatgcagaaatgtagtgctcgttacacccgggcatcccatttttttcctgattatccaagagctgttcttactgcattctcatactaagcatcagttccaacttaacgtgaaatcttcccttgatggcagagggtgacatccacacggaacaaggtcaagatcactgataggatgtgggcgaggctgctatcatcaaccaaccagccaagcttcctaagccagaaggacatcgacgaagccaaagagaacgataggacggccaacaagccaccacttcccaccggcctcagccatcatgtggcaaactctttcgaccagtctgcatcatcttcgtcgaacagccagatatgaactccatcatgtggcaaaccctttcgaccagtctgcgtcatcgtcctcgaacagcgagatgaatccaatctgtagttctatatagaagctgttgctattcccgttgagaaacctgggccacgctacgcagttttgatttaatatgcataatatcacctgtatgaatccacggatactctcctggattgctggtaactacaagcgtaataagaaaagcgctattgatgaagctatttctcataagcaacactcgtgttgtgtcttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0524400, RefSeq:Os05g0524400