Os05g0524600

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Revision as of 10:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0524600| Description = Similar to Serine/threonine-protein kinase BRI1-like 2 precursor (EC 2.7.1.37) (BRASSINOSTEROID INSENSITIVE 1-like pro...")
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Gene Name

Os05g0524600

Description

Similar to Serine/threonine-protein kinase BRI1-like 2 precursor (EC 2.7.1.37) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1)

Version

NM_001062627.2 GI:297604772 GeneID:4339371

Length

6573 bp

Definition

Oryza sativa Japonica Group Os05g0524600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26181609..26188181

Sequence Coding Region

26181609..26181696,26181813..26182365,26183198..26183691,26183939..26184077,26184646..26184717
,26184806..26184877,26185139..26185276,26186337..26186417,26186520..26186680
,26186761..26187029,26187131..26187257,26187328..26187396,26187501..26187693
,26187740..26188181

Expression

GEO Profiles:Os05g0524600

Genome Context

<gbrowseImage1> name=NC_008398:26181609..26188181 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26181609..26188181 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcacggtcgtcgttgtttcttctctgcctcgccaccgccaccgccggcgtactccaagctcgtgcccagcctgacagcaaaggtttcatcagcgtagactgcgggctcccggggaagacgagctacattgacgacaagaccaagatatcctacgcctcggacgacggattcaccgacggcggcaagcactacaacgtctcgccggagtacatcaagccggcggtcacggcgcgctactacaacgtgcgcagcttccccgacggcgcgcgcaactgctacacgctccggtcgctcgtggccggcctcaagtatctcatccgcgccaccttcatgtacggcaactacgacggcctcaacaagctgcccgtgtcgtttgacctccacatcggcgtcaacttctggacggtggtgaacatcacggacccgatccagccggtgaaccgggaggccatcgtcgtcgtgcccgacgactccgtgcaagtctgcctggtgaacaccggcgccgggacaccgttcatctccgggttggacctcaggcctcttatgaacaagctctacccgcaggtgaacgccactcagggcctactccaactcgccaggctcaacttcggcccatctgacgaaacctccatcaggtatccggatgatccgcacgacagagtatggtttccttggtttgatgcggccaagtggaacgagatatcaacgacaaacagggttcagaacatagacaacgacctgttcgaggcgccgacggcggtgatgcagacagcggtcacgccaatcaacgcctccaacaacatcgacttcttctggaactcacagccgcagcccaacgacccagcgccagggtacatcgccatctttcacttctccgagcttgagaacctccccaacaacgccacacggcaattctatatcaacatcaacggcatattgttcgacgatggtttcacaccatcgtttctctacgccgaggcctcctacagctccaaaccctttgtgcgacacccgcagtacaacatcaccattaacgccaccgccaactcgacgatgccgccgctcatcaacgccgtcgaggtgtactctgtcatctccaccgctaacattggcaccgactcacaagatgtatcagcaatcatgacgatcaaggcgaagtaccaggtgaaaaagaattggatgggtgacccgtgcctccctagaaatcttgcgtgggataatttgacctgcagctatgccatttctaaccctgcaagaatcacgagcttaaacctgtcaaaaattggtttgagtggtgagatatcgtcctcttttgggaatctcaaggccctccaatatttggatctatcaaacaacaacttgacaggctcgattccaaatgccctttcacagttgtcttcattgacaatcttcactggtggtgaggacgacgacgggtggctgatggtggacaacaacgatggcgcagctggtggtagacaacgacagcgatggcggacggttgaaggcgcggcgcgcgcggttgagggccgaaggagaagggagcagcgagatttgacaggaaaccaactaaatggaacaattccgcctggacttctcaagagaattcaggatggctttttaaatctaagatatggaaataacccaaatctttgcaccaatggcaactcatgtcaaccaccaaaaaacaagagcaagctagctatctacattgttgttcctatagttctggtcctcgcgatagtatcagtgacgacactactctattgcctactgagaagaaaaaaacaaggatcaatgaacaattctgtaaagcgacaaaacgagacaatgagatatgggccaacaaataatggctccgggcataattcatcactgcggcttgagaaccgctggtttacatataatgaactggagaagataacgaacaaattccagcgagttcttggacaaggaggctttggaaaagtctatgatggcttcttggaggatggcactgaagtggcagtcaaagtgaggactgaatcttccaaccaaggtgataaggagtttcttgtagaggctcaaattttaacccggattcatcacaagaaccttgtctctatgatcggctattgtaaggatgagaaatatatggcacttgtgtatgagtacatgtcagaaggaacccttcaagaacacattgcaggaaaaggaaatgatgggagatacttaacctggaaagagaggcttcgaattgcgctggaatctgctcaagggctagagtacctacacaaagggtgcaaccctcctcttattcaccgtgatgtgaagggaaccaacattttgttgaacacgaggctagaggccaagattgctgattttggtttgtccaaggttttcaatcctgagaacggcacccatgtatctacgaacaaacttgttggcacacctggatatgtggatccagaagaaatactaattgtaagacttattgggactgaccaaatgcgtaggtaccaatcaacaatgcaaccaacgactaagagtgatgtctatagctttggtgttgtcctgttggagttggtaacagggaagccagctatcttgcgtgatccagagcccatcagcatcatccattgggcacaacaacgcttagcacggggtaacattgagggtgtggtgaatgcaagcatgcatggtgactacgatgtgaatggcctatggaaggttgcagacattgcactcaagtgtacggcgctttcgtcagcacaccgccccactatgaccgacgtggtggcacagttgcaagagtgcctcgagctagaggataagcaccaggtcagtgatataaacaatggcttttataatggcaatagtggcgatctaaactctaacttctacaccacttaa</cdnaseq>

Protein Sequence

<aaseq>MAARSSLFLLCLATATAGVLQARAQPDSKGFISVDCGLPGKTSY IDDKTKISYASDDGFTDGGKHYNVSPEYIKPAVTARYYNVRSFPDGARNCYTLRSLVA GLKYLIRATFMYGNYDGLNKLPVSFDLHIGVNFWTVVNITDPIQPVNREAIVVVPDDS VQVCLVNTGAGTPFISGLDLRPLMNKLYPQVNATQGLLQLARLNFGPSDETSIRYPDD PHDRVWFPWFDAAKWNEISTTNRVQNIDNDLFEAPTAVMQTAVTPINASNNIDFFWNS QPQPNDPAPGYIAIFHFSELENLPNNATRQFYININGILFDDGFTPSFLYAEASYSSK PFVRHPQYNITINATANSTMPPLINAVEVYSVISTANIGTDSQDVSAIMTIKAKYQVK KNWMGDPCLPRNLAWDNLTCSYAISNPARITSLNLSKIGLSGEISSSFGNLKALQYLD LSNNNLTGSIPNALSQLSSLTIFTGGEDDDGWLMVDNNDGAAGGRQRQRWRTVEGAAR AVEGRRRREQRDLTGNQLNGTIPPGLLKRIQDGFLNLRYGNNPNLCTNGNSCQPPKNK SKLAIYIVVPIVLVLAIVSVTTLLYCLLRRKKQGSMNNSVKRQNETMRYGPTNNGSGH NSSLRLENRWFTYNELEKITNKFQRVLGQGGFGKVYDGFLEDGTEVAVKVRTESSNQG DKEFLVEAQILTRIHHKNLVSMIGYCKDEKYMALVYEYMSEGTLQEHIAGKGNDGRYL TWKERLRIALESAQGLEYLHKGCNPPLIHRDVKGTNILLNTRLEAKIADFGLSKVFNP ENGTHVSTNKLVGTPGYVDPEEILIVRLIGTDQMRRYQSTMQPTTKSDVYSFGVVLLE LVTGKPAILRDPEPISIIHWAQQRLARGNIEGVVNASMHGDYDVNGLWKVADIALKCT ALSSAHRPTMTDVVAQLQECLELEDKHQVSDINNGFYNGNSGDLNSNFYTT</aaseq>

Gene Sequence

<dnaseqindica>1..88#205..757#1590..2083#2331..2469#3038..3109#3198..3269#3531..3668#4729..4809#4912..5072#5153..5421#5523..5649#5720..5788#5893..6085#6132..6573#atggcggcacggtcgtcgttgtttcttctctgcctcgccaccgccaccgccggcgtactccaagctcgtgcccagcctgacagcaaaggtacgtagtacaatcctagtatcctacctcatagtaatgcgcgcaatgcttcacaaatcaaaaagacatcaatgttcaatgaactaaaagagcatatgtttttcatgcttttgcaggtttcatcagcgtagactgcgggctcccggggaagacgagctacattgacgacaagaccaagatatcctacgcctcggacgacggattcaccgacggcggcaagcactacaacgtctcgccggagtacatcaagccggcggtcacggcgcgctactacaacgtgcgcagcttccccgacggcgcgcgcaactgctacacgctccggtcgctcgtggccggcctcaagtatctcatccgcgccaccttcatgtacggcaactacgacggcctcaacaagctgcccgtgtcgtttgacctccacatcggcgtcaacttctggacggtggtgaacatcacggacccgatccagccggtgaaccgggaggccatcgtcgtcgtgcccgacgactccgtgcaagtctgcctggtgaacaccggcgccgggacaccgttcatctccgggttggacctcaggcctcttatgaacaagctctacccgcaggtgaacgccactcagggcctactccaactcgccaggctcaacttcggcccatctgacgaaacctccatcaggtgagctaagttaaagtttcctacgcgtatagactgtttatatttattatcatatcatttatttatactatcatcagtattactggtgataattcaaactcgataaattttaactaaaagttagtctcacaatatagggtaattttactattcttaagaagttatcgaaaggtatcatattttttagtgtaaaatttggtacctcccggtactaaatattttgaggtatcaaaattattggtgtaaaatcttggtatctttaggcactttatcaaatatcataaaattttccacaatatataggtttagtgatataaatagcgtaatattagattcgtatttacagatactttcatatattttttctgattaccaacatgcaaaatgaggggatatctcttaaaggatgaaatcacttttcccgataagagccagatatttagctaagagcaggtacaatagcaggctataagccagctgcaaacatattttaaggaaatagatgaggagagagaagggaagcgggctacagatttatagccagctgtagcatggactccaatacacagtgtgtatgacatgtgggtccaggtactaatagtgtagtatgtaactattgtatgaatgagctattagattggctatagataaattggagctaatagttggctatactattaaacttgctctaattctctgtagataaattttacggtttttgagaaagtaccaatttttaaattagaaaatatgatatcttctaatattttttttaaggatggtaaaattacccttatctgtaggaaatgcaactgatcgattcaatggccaggtatccggatgatccgcacgacagagtatggtttccttggtttgatgcggccaagtggaacgagatatcaacgacaaacagggttcagaacatagacaacgacctgttcgaggcgccgacggcggtgatgcagacagcggtcacgccaatcaacgcctccaacaacatcgacttcttctggaactcacagccgcagcccaacgacccagcgccagggtacatcgccatctttcacttctccgagcttgagaacctccccaacaacgccacacggcaattctatatcaacatcaacggcatattgttcgacgatggtttcacaccatcgtttctctacgccgaggcctcctacagctccaaaccctttgtgcgacacccgcagtacaacatcaccattaacgccaccgccaactcgacgatgccgccgctcatcaacgccgtcgaggtgtactctgtcatctccaccgctaacattggcaccgactcacaagatggtatgtgctcagggttttcaatttcgatttcatctaaaatttcagccatttcggtagaattaaaatttttaaaattttgaaaatttcagaaatttttggaccgaaattttctgaaattttgacacaatttaacagaatttgactaaattcataaaaaatttgagaaaaactgaaatatgcacatacatgagctagctgatggtcaagcatgtcatgtgcattgatgaaattttttggtgattgacagtatcagcaatcatgacgatcaaggcgaagtaccaggtgaaaaagaattggatgggtgacccgtgcctccctagaaatcttgcgtgggataatttgacctgcagctatgccatttctaaccctgcaagaatcacgagcttgtaagtaataattcattccattagccaaaaacaacatgactattgtgatgaaaaaacaaaactattacctccatcccaaataaaaagagtgcaaacgtgtatggctattgttaaactattgtaaatatgaaaattttaattgtatacacaatgcatagttaatggcttagattaaaataattaaagagaacccatcaattataacttgctaattattaatttaaagttcaaaattaaattaataaaagagatgatatacttgttgcttgtgaatttagaaattattaagttttaggatactaatgaaactaaagaggccatgcatggcagtaaaaattaattaagaccccatgttatttccaatagaattttttatttgatatgaaattttaatacaatctatggtggtcgataccaccatcaatcaccagcctgatcttttttattattattattagcaccctcagaatgccaaatcagcacatgcataaatagcaagaggaaattaaatctaatgggagctaattaactgtgcaatgaaattgggctgatcatattctctttgcagaaacctgtcaaaaattggtttgagtggtgagatatcgtcctcttttgggaatctcaaggccctccaatatttgtatgttatgagttcatgatgtcggatgtattaacttgtttgcgtaatctgagttaaaatttggaaaatcttgctccatatcttgcagggatctatcaaacaacaacttgacaggctcgattccaaatgccctttcacagttgtcttcattgacaatcttgtaagtttggcaattcttttatcaacttttacctagagtaaagtacacggtcggtccttaaagttggagcgaggtgtcacttaggtccatgatcttgaaaaatcgacattaggatccacggtcttgtttaagtgactcattgaggtctaaaggatctctgaccgggttgactagcttatgtggccatccagagtggcaacatatttgcatgtgagctcctccacatccgatccaacccttcttccccaaatcttctttcagcactggtggtgaggacgacgacgggtggctgatggtggacaacaacgatggcgcagctggtggtagacaacgacagcgatggcggacggttgaaggcgcggcgcgcgcggttgagggccgaaggagaagggagcagcggtaagggcagagggcgtcaagctccggcagctgagctctatacaagcttgaggccacggtggcggaggttggaccggcgacgactcggggtatggtggcggcagcggctgagctcagggacgacacgagcgagctcgccggaggtcaccctcgtgctgctacttcgtgtcgtccacgcacatctagccgggagacgacgaggggatgacgagtggtggcgatcgacgcggagcaggaagcagcaacacatcaagggccaggagacaacgaggggacgtcgagagacggcggcttgcagccgtagggatctggccgcagctgggacgggatccaccggtgtgcgcgccgccgcctagcgcggtgatgtccacggccttagtgcggccgtcgtcgccggatccgatggataactcgatgacatcaccgtcattgaggctccgatagctgtcgaacttgagggaggaccggtggacgaagaggtcctcaccgccgttgtcgggagtgatgaagccgaacccattggtggcgtcgaaccccttcatcgtcccctcaccctctccgacaccacctcgccctcaccgccccaagtcgaaccctccaaaaccctaaaagctgcccgccgtctcgctccactggccagccgccgccaccgccctactcgcccttctccctctttgcgcatgctcgccaactcgtcgccgtacccgtctccctcctcgtcgtcactgccgccgccagcccctgcaaccgcaaaccatagaaatcatactgaaagaagatatggggaagaagggttggatcggatgcgggggaggggggcgaaatgcaaatatactgccactctggacggtcacgtaagccagtcaacctggtcagaggtcctttggacctcaatgagtcacttaaacaagatcgcggaccctaatgtctatttttcaagatcatggacctaagtaacacctcgctccaactttaaggaccgaccatgtactttactcttttacctacgtactctttagaatccttttgaactaatatcctactgtatgtcttcttttagagatttgacaggaaaccaactaaatggaacaattccgcctggacttctcaagagaattcaggatggctttttaaatctaaggtaatgacaccacattcttcttatagcagtcttcttcagcaaaaggtgcagatcaatttttcagaaaatggacataaacatatttatgtcattaatatatagatatggaaataacccaaatctttgcaccaatggcaactcatgtcaaccaccaaaaaacaagagcaagctagctatctacattgttgttcctatagttctggtcctcgcgatagtatcagtgacgacactactctattgcctactgagaagaaaaaaacaaggtgggtcttgctatcatttgtctgctctacttcatcttcttgaatactactgatgctagttccattcttcacgtacaaaggatcaatgaacaattctgtaaagcgacaaaacgagacaatgagatatgggccaacaaataatggctccgggcataattcatcactgcggcttgagaaccgctggtttacatataatgaactggagaagataacgaacaaattccagcgagttcttggacaaggaggctttggaaaagtctatgatggcttcttggaggatggcactgaagtggcagtcaaagtgaggactgaatcttccaaccaaggtgataaggagtttcttgtagaggtagaattttttaagctgcactttttcttgctatgtaaaaatttctatcaagaaaagtctccatgggggcatcattaaatagacaagtttcaccactttaggctcaaattttaacccggattcatcacaagaaccttgtctctatgatcggctattgtaaggatgagaaatatatggcacttgtgtatgagtacatgtcagaaggaacccttcaagaacacattgcaggtccgaactaacttcatctaccagcttatttttttagtcctttcatgatctccaattcttatatttgcaggaaaaggaaatgatgggagatacttaacctggaaagagaggcttcgaattgcgctggaatctgctcaaggtaactacttagaatttctaatgctatttttagtttgattttacattttttctctctctagaagcttgatcagtatttcaattacatggtgaattaatgatcagggctagagtacctacacaaagggtgcaaccctcctcttattcaccgtgatgtgaagggaaccaacattttgttgaacacgaggctagaggccaagattgctgattttggtttgtccaaggttttcaatcctgagaacggcacccatgtatctacgaacaaacttgttggcacacctggatatgtggatccagagtatgttgtctttcttgaagccctttttttaaagttcttttgttagagaaatactaattgtaagacttattgggactgaccaaatgcgtaggtaccaatcaacaatgcaaccaacgactaagagtgatgtctatagctttggtgttgtcctgttggagttggtaacagggaagccagctatcttgcgtgatccagagcccatcagcatcatccattgggcacaacaacgcttagcacggggtaacattgagggtgtggtgaatgcaagcatgcatggtgactacgatgtgaatggcctatggaaggttgcagacattgcactcaagtgtacggcgctttcgtcagcacaccgccccactatgaccgacgtggtggcacagttgcaagagtgcctcgagctagaggataagcaccaggtcagtgatataaacaatggcttttataatggcaatagtggcgatctaaactctaacttctacaccacttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0524600, RefSeq:Os05g0524600