Os05g0525000

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Revision as of 10:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0525000| Description = Protein kinase-like domain containing protein| Version = NM_001062629.2 GI:297604774 GeneID:4339374| Length = 3403 b...")
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Gene Name

Os05g0525000

Description

Protein kinase-like domain containing protein

Version

NM_001062629.2 GI:297604774 GeneID:4339374

Length

3403 bp

Definition

Oryza sativa Japonica Group Os05g0525000, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26197287..26200689

Sequence Coding Region

26197287..26197794,26197902..26198034,26198122..26198193,26198285..26198356,26198455..26198535
,26198642..26198805,26198895..26199160,26199250..26199376,26199734..26199802
,26199900..26200092,26200188..26200689

Expression

GEO Profiles:Os05g0525000

Genome Context

<gbrowseImage1> name=NC_008398:26197287..26200689 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26197287..26200689 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccaggtaccccgacgatccacgcgacagagtatggacaccttgggactcgccatcaaattggaccgagatatcaacgacgaggccggtgcagcagacatacgacgacctgttcgaggtgccaacggcggtgatgcagacggctattgtcccaatgtttgccacagacaacatcgagctcgcatgggtagcctacacacagcccaaggacccgtcgccggggtacatcgccatcatgcacttctccgagctggagctcagcccccccagccgtgatgtgcgagaattctacatcaacctcaacggcaacatgatgtacagcaagggctacaagccagtgtatctctacgcccacgccatctacaacaccaaccccttcctacgatacccgcagtacaatatctccatcaacgccacctataactcgacgatgcgaccgttcatcaacgccatggaggtgtactccgttttctccaccaccaccattggcacatatggtcaggacgcttctgccatgatggtgatcaaggaaaagtatcaggtgaagaagaattggatgggtgatccgtgcattccgacagaatttacatgggaaagtttgacatgcagctatgaaaactccaaacacgtaataaaaataaacctgtcctccagtggtttgagtggtgagatatcatcttcttttggggatctcaaggctcttcaatacttggatttgtcaaacaacaatttgacaggttcgattccggatgcactttcacagttaccttcattgacagtattagatctgacaggaaatcaactcaatggttcaattccatctggacttctcaaaagaattcaagatggtaccctaaatataaaatatggaaataatccaaacctctgcaccaacgacaattcatgtcaggcagcaaaacacaagagcaagcttgccatctacatagtcgctcctgtagttctggttctggtgatagtatcagtcacaatactactcttttgccttctaggacaaaaaaagaagcaaggatcaatgaacacttctataaagccgcaaaatgaggcgaactatgtgccgacaaatgacagcgatgggcatggttcatcaatgcagcttgagaaccgacgatttacatataaagatctggaaaagataacgaacaactttcaacgagtgctcggccgaggagggtttgggaaggtctacgatggcttcttggaagaaggtactcaagtggcagtcaaattgaggtctgaatcttccaatcaaggtgataaggaatttctcgtagaggctcaaattttaactcggattcaccataagaaccttgtctccatgatcggttattgcaagaatgggaaatacatggcacttgtctatgagtatatgtcagaaggaacccttcaagaacacattgcgggtaaaagaaacaacgggagacatttaacctggagggagaggcttcgaatagcgttagaatccgctcaagggctagagtacctacacaagtggtgcaatccgcctcttattcatagagatgtgaaggctaccaacattctattgaatgcgaggctagaggctaagattgctgattttggcttgtccaagtcattcaatcttgagaatggcacccatgtatctacgaacacgcttgttggtactcccggatacgtggatccagagtaccaagcaacaatgcaaccatcgaccaagagtgatgtctatagctttggtgtcgtcctgctagaactggtaacaggaaagtcggctgtcctacgtgatccagagcccataagcattatccattgggcgcaacaacgcctagcacagggtaatatcgaagaagtggtggatgcatgtatgtgtggcgaccatgatgtaattggtgtatggaaggttgcggacatcgcattcaagtgtaccgcgcaggtatcagcgcgacggcccactatgactgacgtggttgcgcagttacaagagtgccttgagcttgaggaggagcattgtgccgtcaatgatgcaaacaacaacttctacaccagcaataacagcaaacctaactcaagttatgacacatacgccgctgaccactctatcgatgtgagtcagaacagtgttgcatttgagatggagaaaaattttggaaggatgccatcaacagcccccggtcccgccacacgataa</cdnaseq>

Protein Sequence

<aaseq>MSRYPDDPRDRVWTPWDSPSNWTEISTTRPVQQTYDDLFEVPTA VMQTAIVPMFATDNIELAWVAYTQPKDPSPGYIAIMHFSELELSPPSRDVREFYINLN GNMMYSKGYKPVYLYAHAIYNTNPFLRYPQYNISINATYNSTMRPFINAMEVYSVFST TTIGTYGQDASAMMVIKEKYQVKKNWMGDPCIPTEFTWESLTCSYENSKHVIKINLSS SGLSGEISSSFGDLKALQYLDLSNNNLTGSIPDALSQLPSLTVLDLTGNQLNGSIPSG LLKRIQDGTLNIKYGNNPNLCTNDNSCQAAKHKSKLAIYIVAPVVLVLVIVSVTILLF CLLGQKKKQGSMNTSIKPQNEANYVPTNDSDGHGSSMQLENRRFTYKDLEKITNNFQR VLGRGGFGKVYDGFLEEGTQVAVKLRSESSNQGDKEFLVEAQILTRIHHKNLVSMIGY CKNGKYMALVYEYMSEGTLQEHIAGKRNNGRHLTWRERLRIALESAQGLEYLHKWCNP PLIHRDVKATNILLNARLEAKIADFGLSKSFNLENGTHVSTNTLVGTPGYVDPEYQAT MQPSTKSDVYSFGVVLLELVTGKSAVLRDPEPISIIHWAQQRLAQGNIEEVVDACMCG DHDVIGVWKVADIAFKCTAQVSARRPTMTDVVAQLQECLELEEEHCAVNDANNNFYTS NNSKPNSSYDTYAADHSIDVSQNSVAFEMEKNFGRMPSTAPGPATR</aaseq>

Gene Sequence

<dnaseqindica>1..508#616..748#836..907#999..1070#1169..1249#1356..1519#1609..1874#1964..2090#2448..2516#2614..2806#2902..3403#atgtccaggtaccccgacgatccacgcgacagagtatggacaccttgggactcgccatcaaattggaccgagatatcaacgacgaggccggtgcagcagacatacgacgacctgttcgaggtgccaacggcggtgatgcagacggctattgtcccaatgtttgccacagacaacatcgagctcgcatgggtagcctacacacagcccaaggacccgtcgccggggtacatcgccatcatgcacttctccgagctggagctcagcccccccagccgtgatgtgcgagaattctacatcaacctcaacggcaacatgatgtacagcaagggctacaagccagtgtatctctacgcccacgccatctacaacaccaaccccttcctacgatacccgcagtacaatatctccatcaacgccacctataactcgacgatgcgaccgttcatcaacgccatggaggtgtactccgttttctccaccaccaccattggcacatatggtcaggacggtatgtacatagacgatagagaacacacacacacacacacacacaagtgaaatggcctaattgttttggcgcgtgttactgatcgaaatcatctttgcacttgacagcttctgccatgatggtgatcaaggaaaagtatcaggtgaagaagaattggatgggtgatccgtgcattccgacagaatttacatgggaaagtttgacatgcagctatgaaaactccaaacacgtaataaaaatgtaagtaattgagtccacacgtactgaatattggagttgcataacggaagtatgaaacagggtcatctgatcacattctctttgcagaaacctgtcctccagtggtttgagtggtgagatatcatcttcttttggggatctcaaggctcttcaatacttgtacgttctgagttgaataatgttaatttgttaaccttgtttgtaagaattttgcattaaaatttgcaaagtcttgcttcatatcttctagggatttgtcaaacaacaatttgacaggttcgattccggatgcactttcacagttaccttcattgacagtattgtaagtttcgcaacttctgtcaaattttactttattgcctagcatcatttgtattaacaaacatctacatataccttatgggcatatggcttctttagagatctgacaggaaatcaactcaatggttcaattccatctggacttctcaaaagaattcaagatggtaccctaaatataaagtaattaagtacaccacgttcttctcacagcaatctttgaatgtctaaactcaaccattttgagaaaatagattgatttgactaggcgtcttcattccatcaacagatatggaaataatccaaacctctgcaccaacgacaattcatgtcaggcagcaaaacacaagagcaagcttgccatctacatagtcgctcctgtagttctggttctggtgatagtatcagtcacaatactactcttttgccttctaggacaaaaaaagaagcaaggtgagggttacaaccatagcaactatctgctctatttctctgttcttgaacattactgatgctagttgctccattcttcgcttatgaaggatcaatgaacacttctataaagccgcaaaatgaggcgaactatgtgccgacaaatgacagcgatgggcatggttcatcaatgcagcttgagaaccgacgatttacatataaagatctggaaaagataacgaacaactttcaacgagtgctcggccgaggagggtttgggaaggtctacgatggcttcttggaagaaggtactcaagtggcagtcaaattgaggtctgaatcttccaatcaaggtgataaggaatttctcgtagaggtagaatttcgtcagttgaatttgatcttgctacatagagatttctactaagaaaagtccaagtaattagttaacatttgcttgtttaggctcaaattttaactcggattcaccataagaaccttgtctccatgatcggttattgcaagaatgggaaatacatggcacttgtctatgagtatatgtcagaaggaacccttcaagaacacattgcgggtacgtatttatgtttttgttcccgatcaagttgcagagtactccttccattttatattttaagttgtttgacttttttttcttagacaaacttctttaaatttgatcaagtttatagaaaaatatagtagtattttcaatacaatacaaacttattatcaaaatatattcaatgttagatttaaagaatctaatttgatattttagattgctaaatttttctataaacttgatcaaaaagtaaaagtcaaacgacttataatatgaaacagagggagtacactgtaaaacatcatgtagtggatcattttatagtcctcatggtctcacccctctttgttctctacctatttgtaggtaaaagaaacaacgggagacatttaacctggagggagaggcttcgaatagcgttagaatccgctcaaggtaactactttaaatttgtagtagtgctacttgaggtttgattttacattttctctaaaaggttggctagtagttaaattctttggttaatggtcagggctagagtacctacacaagtggtgcaatccgcctcttattcatagagatgtgaaggctaccaacattctattgaatgcgaggctagaggctaagattgctgattttggcttgtccaagtcattcaatcttgagaatggcacccatgtatctacgaacacgcttgttggtactcccggatacgtggatccagagtatgctaatttatatgtatttcttgatgttgttctttagtattttctatgaggaacacaaagtttaaggtttgtggtactgattgaatgtgcaggtaccaagcaacaatgcaaccatcgaccaagagtgatgtctatagctttggtgtcgtcctgctagaactggtaacaggaaagtcggctgtcctacgtgatccagagcccataagcattatccattgggcgcaacaacgcctagcacagggtaatatcgaagaagtggtggatgcatgtatgtgtggcgaccatgatgtaattggtgtatggaaggttgcggacatcgcattcaagtgtaccgcgcaggtatcagcgcgacggcccactatgactgacgtggttgcgcagttacaagagtgccttgagcttgaggaggagcattgtgccgtcaatgatgcaaacaacaacttctacaccagcaataacagcaaacctaactcaagttatgacacatacgccgctgaccactctatcgatgtgagtcagaacagtgttgcatttgagatggagaaaaattttggaaggatgccatcaacagcccccggtcccgccacacgataa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0525000, RefSeq:Os05g0525000

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os05g0525000&oldid=14705"