Os05g0525550

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Revision as of 10:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0525550| Description = Protein kinase-like domain containing protein| Version = NM_001187567.1 GI:297724264 GeneID:9272354| Length = 5147 b...")
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Gene Name

Os05g0525550

Description

Protein kinase-like domain containing protein

Version

NM_001187567.1 GI:297724264 GeneID:9272354

Length

5147 bp

Definition

Oryza sativa Japonica Group Os05g0525550, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26204551..26209697

Sequence Coding Region

26204551..26204641,26204766..26205303,26205471..26205967,26206065..26206203,26206446..26206517
,26206598..26206669,26206765..26206845,26206953..26207116,26207209..26207477
,26207566..26207692,26207813..26207881,26207979..26208171,26208267..26208684
,26209674..26209697

Expression

GEO Profiles:Os05g0525550

Genome Context

<gbrowseImage1> name=NC_008398:26204551..26209697 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26204551..26209697 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcatggtcgtggttaattctactatgcctcgtcgccgccgccaccgccggcgtgctccaagctcgtgcccagcctgatagcaaagactgcggcctcccggggaagacgagctacgtggacgacaagaccaagatatcctacgcggcggacgacggcttcaccgacggcggctcgttccacaacatctcggcggagtacatcacgccggcgctctcggcgcgctaccacaacgtgcgcagcttccccgacggcgcgcgcaactgctacacgctccggtcgctcgtggccggcctcaagtacctcatccgcgccaccttcatgtacggcaactacgacggcctcagcaagctgccaatcttcgacgtctacatcggcgtcaacttctggatgatggtcaacatctcggacccctccggcgcgacgctcctggaggccatcgtcgtcgtgccggacgacttcgtgcaggtttgcctcgtgaacaccggcaccgggacaccgttcatctccgggctggacctcaggcctctcgagaagaagctctacccgcaggcgaacgacaagcggggcctgtccttgttcggcagatggaactttggcccaattagtactaccgagttcatcaggtaccccgacgatccacacgacagaatatggatgccttgggtctcgccatcatattgggtcgaggtatcgacgacgaggccggtgcagcacacggacgaggacgtattcgacgcgccgacgaaggtgatgcagacggcgattgcgccgctcaacgcctcgagcaacatcgagttcgcctgggtaccctacacgcagcccaaggacccggcgccggggtacatcaccgtcatgcacttctccgagctgcagctccgctccagcaacgccacgcgccagttctacatcaacctcaacggcaacatggtgtttagccagggctacacgccggcgtacctctacgccgacgccatcttcaacagcaacccgttcctacgatacccgcagtacaacatctccatcaacgccaccgccaactcgacgctgccaccgatcatcaacgccatcgaggtgttctccgtcttctccaccgccaccgttggcacagatggtcaggatgcttccgccatgatggtgatcaaggaaaagtatcaggtgaagaagaactggatgggtgatccgtgcgttccaaagacgcttgcgtgggataagttgacatgcagctatgacagctccaaacctgcaagaatcacagacataaatctgtcatccggtggtttaagtggtgagatatcgtccgcttttgcgaatctcaaggctcttcaaaacttggatctgtcaaacaacaatttgacaggttcgattccagatgcactttcacagttgccttcgttggcagtattagatttgacaggaaatcaactcaatggttcaattccatctggacttctcaaaagaattcaagatggtaccctaaatataaaatacggaaataacccaaacctctgcaccaacgacaattcatgtcagccagcaaaacacaagagcaagcttgccatctatgtagctgttcctgtagttctggttttggtgatagtatcagtcacaatactgctcttttgccttctgggacgaaaaaagaagcaaggatcaatgaacacttccgtaaagccgcagaatgagacagcgagctatgtgccgacaaatggcagccatgggcatggctcatcaatgcagcttgagaaccgacggtttacttacaatgatttagagaagataacaaacaactttcagcgagtgctcggcgaaggagggtttgggaaggtctacgatggcttcttggaagatggcactcaagtggcagtcaaattaaggtctgaatcttccaaccaaggggataaggaatttctcgcagaggctcagattttaactcggattcaccacaagagccttgtatctatgatcggttattgcaaggatgggaaatacatggcacttgtctatgagtacatgtcagaaggaacccttcgagaacatatttcaggtaaaagaaacaacgggagatacttaacctggagagagaggcttcgaatcgcgctggaatccgctcaagggctagagtacctacacaagtggtgcaatccgcctcttattcacagagatgtgaaggctaccaacattctattgaatgcgaagctagaggctaagattgctgattttggcttatccaagacgttcaatcttgagaatggcacacatgtatctacgaacacgcttgttggcacacctggatacgtggatccagagtaccaggcaacaatgcaaccaacgaccaagagtgacgtctatagctttggtgttgtcctattggagctggtcacagggaagccggctgtcctacgtgatccagagcccataagtatcattcattgggcgcaacagcgcctagcacagggtaatattgagggagtggtggatgcacgtatgcatggtgaccatgatgtaaatggtgtatggaaggctacggacatcgcactcaagtgtaccacacaagtatcggcacaacggcccactatgaccgatgtggtggcacaactgcaagagtgcctcgagctcgaggaggggcgttgtgccatcagcaatgcgaacaacaatttctataccgacaataacagcaactctaactcaagttatgacatgtatgccactgaccactctattgatatccagtcgtggggaactccatga</cdnaseq>

Protein Sequence

<aaseq>MAAWSWLILLCLVAAATAGVLQARAQPDSKDCGLPGKTSYVDDK TKISYAADDGFTDGGSFHNISAEYITPALSARYHNVRSFPDGARNCYTLRSLVAGLKY LIRATFMYGNYDGLSKLPIFDVYIGVNFWMMVNISDPSGATLLEAIVVVPDDFVQVCL VNTGTGTPFISGLDLRPLEKKLYPQANDKRGLSLFGRWNFGPISTTEFIRYPDDPHDR IWMPWVSPSYWVEVSTTRPVQHTDEDVFDAPTKVMQTAIAPLNASSNIEFAWVPYTQP KDPAPGYITVMHFSELQLRSSNATRQFYINLNGNMVFSQGYTPAYLYADAIFNSNPFL RYPQYNISINATANSTLPPIINAIEVFSVFSTATVGTDGQDASAMMVIKEKYQVKKNW MGDPCVPKTLAWDKLTCSYDSSKPARITDINLSSGGLSGEISSAFANLKALQNLDLSN NNLTGSIPDALSQLPSLAVLDLTGNQLNGSIPSGLLKRIQDGTLNIKYGNNPNLCTND NSCQPAKHKSKLAIYVAVPVVLVLVIVSVTILLFCLLGRKKKQGSMNTSVKPQNETAS YVPTNGSHGHGSSMQLENRRFTYNDLEKITNNFQRVLGEGGFGKVYDGFLEDGTQVAV KLRSESSNQGDKEFLAEAQILTRIHHKSLVSMIGYCKDGKYMALVYEYMSEGTLREHI SGKRNNGRYLTWRERLRIALESAQGLEYLHKWCNPPLIHRDVKATNILLNAKLEAKIA DFGLSKTFNLENGTHVSTNTLVGTPGYVDPEYQATMQPTTKSDVYSFGVVLLELVTGK PAVLRDPEPISIIHWAQQRLAQGNIEGVVDARMHGDHDVNGVWKATDIALKCTTQVSA QRPTMTDVVAQLQECLELEEGRCAISNANNNFYTDNNSNSNSSYDMYATDHSIDIQSW GTP</aaseq>

Gene Sequence

<dnaseqindica>1..91#216..753#921..1417#1515..1653#1896..1967#2048..2119#2215..2295#2403..2566#2659..2927#3016..3142#3263..3331#3429..3621#3717..4134#5124..5147#atggcggcatggtcgtggttaattctactatgcctcgtcgccgccgccaccgccggcgtgctccaagctcgtgcccagcctgatagcaaaggtacaaacacaaattttcatcgggcattaagtagcgcttcacagtgaaatcaatatgcacaagctatcatactttcgcagttgctaattaaatgtaaagtgaactccaggtttcattagcgtagactgcggcctcccggggaagacgagctacgtggacgacaagaccaagatatcctacgcggcggacgacggcttcaccgacggcggctcgttccacaacatctcggcggagtacatcacgccggcgctctcggcgcgctaccacaacgtgcgcagcttccccgacggcgcgcgcaactgctacacgctccggtcgctcgtggccggcctcaagtacctcatccgcgccaccttcatgtacggcaactacgacggcctcagcaagctgccaatcttcgacgtctacatcggcgtcaacttctggatgatggtcaacatctcggacccctccggcgcgacgctcctggaggccatcgtcgtcgtgccggacgacttcgtgcaggtttgcctcgtgaacaccggcaccgggacaccgttcatctccgggctggacctcaggcctctcgagaagaagctctacccgcaggcgaacgacaagcggggcctgtccttgttcggcagatggaactttggcccaattagtactaccgagttcatcaggtgagtaattaaaagattcatccaagtttttttctagataatagaaatggtttacatctttgatctttaccattgggcacacacagttgaaaaagaaagatgataaatagtcaatccaagagggtacaatgaattgatcaaacggaacacaaccgattaatggccaggtaccccgacgatccacacgacagaatatggatgccttgggtctcgccatcatattgggtcgaggtatcgacgacgaggccggtgcagcacacggacgaggacgtattcgacgcgccgacgaaggtgatgcagacggcgattgcgccgctcaacgcctcgagcaacatcgagttcgcctgggtaccctacacgcagcccaaggacccggcgccggggtacatcaccgtcatgcacttctccgagctgcagctccgctccagcaacgccacgcgccagttctacatcaacctcaacggcaacatggtgtttagccagggctacacgccggcgtacctctacgccgacgccatcttcaacagcaacccgttcctacgatacccgcagtacaacatctccatcaacgccaccgccaactcgacgctgccaccgatcatcaacgccatcgaggtgttctccgtcttctccaccgccaccgttggcacagatggtcaggatggtatgtagatagacagacggtagaatacataagagtaaaacgtacggtgtgatggtttgtgcgtgttactgatcgaaaacatgggtgcacttgacagcttccgccatgatggtgatcaaggaaaagtatcaggtgaagaagaactggatgggtgatccgtgcgttccaaagacgcttgcgtgggataagttgacatgcagctatgacagctccaaacctgcaagaatcacagacatgtaagtaattcagtccacatgtactccctccgtccaaaaaaaaccaactagacacggatatgacactacatagtacaacgaatctggacatgagcatgtccagattcgttgtactatgttgtgtcacatccgtgtttaagtgggtttttttttaggacggagggagtactgaatattggacttgcataatggaattatggaagtatggaactcgcggtcatctgatcatattccttttgcagaaatctgtcatccggtggtttaagtggtgagatatcgtccgcttttgcgaatctcaaggctcttcaaaacttgtatgttatgaggttcagaatgttaatttgttgaccgtttgtggaattttgcgttaaaagacttgcttcatatcttgcagggatctgtcaaacaacaatttgacaggttcgattccagatgcactttcacagttgccttcgttggcagtattgtaagtttggcaactcctgtcaaattttactttattgcctagcatcatttgtaactgacatatgtatataatttatgggcatatggcttctttagagatttgacaggaaatcaactcaatggttcaattccatctggacttctcaaaagaattcaagatggtaccctaaatataaagtaattaagtacacccccactcttctcttagtaatctttgaatgtccaaattcagtcaatttgacaaaatagactgatttggctaaacatcttcattccatcaacagatacggaaataacccaaacctctgcaccaacgacaattcatgtcagccagcaaaacacaagagcaagcttgccatctatgtagctgttcctgtagttctggttttggtgatagtatcagtcacaatactgctcttttgccttctgggacgaaaaaagaagcaaggtgaggcttgttacaaacatagcaattatcaactctatttctctgtccttgaacatttctgatgctagtagttccattcttcgcttatgaaggatcaatgaacacttccgtaaagccgcagaatgagacagcgagctatgtgccgacaaatggcagccatgggcatggctcatcaatgcagcttgagaaccgacggtttacttacaatgatttagagaagataacaaacaactttcagcgagtgctcggcgaaggagggtttgggaaggtctacgatggcttcttggaagatggcactcaagtggcagtcaaattaaggtctgaatcttccaaccaaggggataaggaatttctcgcagaggtagaatttcttcggttgaatttgatcttgctacataaagattctactaagaaaagtatgattaattagtcaagttttgcttgtctaggctcagattttaactcggattcaccacaagagccttgtatctatgatcggttattgcaaggatgggaaatacatggcacttgtctatgagtacatgtcagaaggaacccttcgagaacatatttcaggtatgtacttaagttgttgttcccgatcaattcgcagggtacattgtaaaacttcatctagtggctcatttgatagtcctcatgatatctcccccttctgtgttctcttcctatttgcaggtaaaagaaacaacgggagatacttaacctggagagagaggcttcgaatcgcgctggaatccgctcaaggtaactactttaaaattgtaatactgtttcgtgaggtttgattttacattttctctagaaggttgatcagtaattaaatttcctggttaatggtcagggctagagtacctacacaagtggtgcaatccgcctcttattcacagagatgtgaaggctaccaacattctattgaatgcgaagctagaggctaagattgctgattttggcttatccaagacgttcaatcttgagaatggcacacatgtatctacgaacacgcttgttggcacacctggatacgtggatccagagtatgttaatccatatgtatttcttgatgttgttatttagtgttttatgtgagaaacacaaagtttaaggcttgtggaactaattgaatgtgcaggtaccaggcaacaatgcaaccaacgaccaagagtgacgtctatagctttggtgttgtcctattggagctggtcacagggaagccggctgtcctacgtgatccagagcccataagtatcattcattgggcgcaacagcgcctagcacagggtaatattgagggagtggtggatgcacgtatgcatggtgaccatgatgtaaatggtgtatggaaggctacggacatcgcactcaagtgtaccacacaagtatcggcacaacggcccactatgaccgatgtggtggcacaactgcaagagtgcctcgagctcgaggaggggcgttgtgccatcagcaatgcgaacaacaatttctataccgacaataacagcaactctaactcaagttatgacatgtatgccactgaccactctattgatgtaagtcagaacagcgctgcatttgagacggagcgtaattttggaaggatgccatcaacggccaccggtccagctgcacgataaatcattttgcccatctgatctgaatgctgtcattttctgggaaagatcttcatggaagttttaacaatgttgttttaccaaagtaaatgcaaatgtacaaattaatttcaaaaactcaagatcctcagtataaaccctttcggttatgaactcagaattcatatacttgtctcttctttgagtggcattattgtcctgtactattctttaggaagagaaacaccaatttatctgttcattcatgatgttttgtagtaaccagaatccacattttctattttttctaaatgctctttgctttgatgttggaaataaactcataagcctagtgttgggatgccaaaatttatggaatctgcatagcttagtaggctagcataccacaatttgcatgcattttttttcctgaagggtttagtttcgatggaactgaagctaactttattcgccaagatggactataatctagtgactttactcatcttctattggtagtctaccacctgtctatttgcggtacatttagctgttattaaaaaaaattcctttgggtggatttcaggtggatggagtcacacattgtataccttcctaagaccttgttcggtaatccccatgagatatggattaaaagagattgatgaggaataattccacatgtattgaggtgtgccccccctcaatccccttgttggtgggattaaccgaataaggcctaagggagaacacaaaagtaagatccatttgacagaactctatgtgcatgtacttgaagtgaaaatgctaatattttccttcaatagagttataaaaggatgaatgctcaattattgaacaagaactttctagccagcctttgacttctttaaggagcccatcccttactagggttggtatgcttccagatccagtcgtggggaactccatga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0525550, RefSeq:Os05g0525550