Os11g0121400

From RiceWiki
Revision as of 21:14, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0121400

Description

Similar to Protein kinase APK1A, chloroplast precursor (EC 2.7.1.-)

Version

NM_001072144.1 GI:115483900 GeneID:4349633

Length

4719 bp

Definition

Oryza sativa Japonica Group Os11g0121400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:946568..951286

Sequence Coding Region

946876..947330,947499..947622,947739..947875,948627..948762,949468..949802
,950949..951003

Expression

GEO Profiles:Os11g0121400

Genome Context

<gbrowseImage1> name=NC_008404:946568..951286 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:946568..951286 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaactgcgggacgcgagaggagaatgccgtcgttgcggcgcacgcccaagttcagcagctccatttgttacaacatcctgtcaagaatgctgttgcagagaggaagcacacccgcatctcatcagatatgagtgatccttcaacacctaggaaaattgaagatgccaagaacatctccatatacaatgatgtgattgacttcacattgtttgaactcgagactatcacaaggagcttccgtgctgactacgttcttggtgaaggagggtttgggactgtttacaagggctacatagatgagaatgtcagggttggtctgaagtcactacctgttgcagtcaaggtgctcaacaaagatggacatcaaggacacagagaatggcttactgaggttaggttccttgggcagctaagacatccaaatttagtcaagttgattgggtattgctgcgaagatgaccacaggctgcttgtgtacgagttcatgtttcgaggaagtctagaaaaccacttattccgaaggacagctactccactatcgtgggctactaggatgtcgattgcattaggagctgccaaagggttagcttgcctccacaatgctgaaaggccaattatctacagggatttcaagacatcaaatattctgctggactcagattatactgctaaactctctgactttggtctggcaaaagctggcccagaaggcgatcaaacccatgtatcaactcgggtgatgggaacatatggttatgctgcccctgaatatgtgatgactggtcacttgactgctagaagtgatgtctacagctttggtgttgtccttcttgaactcttgactgggcgtaagtccatcgacaagtcacggcccagcagggagcatagcttggttgactgggccctcccgaagctgaacgacaagaggaggcttctccaaatcattgacccaaaactggagggacagtattcagttagagctgcccacaaagcctgcagcctagcatactactgcttgagccaaaacccaaaggcgaggcctcttatgagcgacgtcgttgagactcttgaaccattgcagggcagtggtggaagtgatggagctgttcaatctgttcttggcagtggccttccgagctacagagtaaaccgcagactaatgacgaacagagtccactgtagggcgcttccgaaccccaagtgctcccctgctgtcccagcatgcagggtgagatga</cdnaseq>

Protein Sequence

<aaseq>MGNCGTREENAVVAAHAQVQQLHLLQHPVKNAVAERKHTRISSD MSDPSTPRKIEDAKNISIYNDVIDFTLFELETITRSFRADYVLGEGGFGTVYKGYIDE NVRVGLKSLPVAVKVLNKDGHQGHREWLTEVRFLGQLRHPNLVKLIGYCCEDDHRLLV YEFMFRGSLENHLFRRTATPLSWATRMSIALGAAKGLACLHNAERPIIYRDFKTSNIL LDSDYTAKLSDFGLAKAGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGV VLLELLTGRKSIDKSRPSREHSLVDWALPKLNDKRRLLQIIDPKLEGQYSVRAAHKAC SLAYYCLSQNPKARPLMSDVVETLEPLQGSGGSDGAVQSVLGSGLPSYRVNRRLMTNR VHCRALPNPKCSPAVPACRVR</aaseq>

Gene Sequence

<dnaseqindica>3957..4411#3665..3788#3412..3548#2525..2660#1485..1819#284..338#gctgcccccctctcgctctcccaccaccgtccatcccacttccacgcgcacacagcaaagcaaaccaacaccaaaccaaaccaaagcaagcttcgtttccgctgcccccccacaggccactggaggatgaagagcacgcagcatcgcctctaccggcggcgcatggcataggcatcgcctgcccccaccccgcccccgcccaagaatgagagcttgggcctccactacaagagatagagacagacccaccaccatcaagaacatcaggaggagaagtagatagatgggcaactgcgggacgcgagaggagaatgccgtcgttgcggcgcacgcccaaggtattcttcgcttcctcggatttgatttcttgggggatttcccggtgattgttttcttgggatgctggttgttgggatgggatctcgggttggatgatctgaatttcatcaaaaaaaattgatcttggtggttatttctgggttcccctgatctctaggactctaggttggtgggttcagtggggaattgacaaaagcactgtctttcctttttgctatatatgatgacttatgttattgggacctttggatgggtgttttggttgcaaatgttcattcttgttagggctattccaaatcggcattttggtactctccggtttaggtttgattaaaatctgatatcaacatttgctccaaatcttcaacattgtttttctgtttgttgcatatgaatgttcaacattgtttttctgtttgttgcatatggggattctgggattttggtttacagtctacatttgctcaacatctttttttttcctttttttgcggggaagccctcatccccttaatctttctggtgtggttgctctgtgatttcttctctgctgcatatccttatcttcttggttgctgtatcagaaattctgcttcattatgttcatcgggacaatttacaggcacttcccccaatagtgctgcaatttctgtgctctctgcttcactgaggcactgttgactttcagtttaacagaaaatagagttatgatcctgcaagttggaaaaacataatcacttcttgcagtttgctgcattgtttaagcaatttggagccctttttttattgcatgcaactctgcagtagatctggtctcctggtcctgtttacctctttctgtaatcaacttgcccatgtatgtacttttttacagtatttttaggtagaataccatattataattgctaggaatcgccaacgctcgtttccagtagttctcttgttagtttgtgattatagcttccctaaacgtatttcagcaggattagctctctttcatccatccatctctgtgaatgctgaaaattcaatatgaaaaaaaaagcttgccttttattttgtttgtacgagaatttctggtaaccttaattcgtttataccttaactattttttctttcttattgttgaaatgtcatcttctcagttcagcagctccatttgttacaacatcctgtcaagaatgctgttgcagagaggaagcacacccgcatctcatcagatatgagtgatccttcaacacctaggaaaattgaagatgccaagaacatctccatatacaatgatgtgattgacttcacattgtttgaactcgagactatcacaaggagcttccgtgctgactacgttcttggtgaaggagggtttgggactgtttacaagggctacatagatgagaatgtcagggttggtctgaagtcactacctgttgcagtcaaggtgctcaacaaagatggacatcaaggacacagagaatggcttgtgagttgccaacttgttcaatattcactatggttgctgatgtccgttatgtacatggatacgcggaacattaacaattactcgtacaagaacatgatatatcttaattatgtaaattatggaaaaatatttgttgatgctaactatgtatttcacaacaaatcaacaatggcacatgcagcatttagttatactcaagttaacaagtacgctagcaaataaatataccatgcaaaattctgctttcatgtttcttagtttgttccctttttggaatagaaaatttctcaagaagctacaagtcatagttagaatgattcattgggcttgtatcatgaagaaaaatgtgcacacttgataggttgatgaaggctaaagtattaatttcattggccgaatgcatgtagactgagtcatactgttaaatagcatatttcttgaatgtttacaaacagaacagtgtatctacacatgctacaaatagaacagtgtatctacacatgctcggaataggtgaaattctatttcttttttaaaggagaataagcaacatgtccataaacgaaacatgatatattgaatttgactaagcaattttggcagttttcgggcatattattaacttggaaattcattaccttttcattcttgtcgttatgttagaagaattatcaagaagtaactcatcttttgtttctttgtcagactgaggttaggttccttgggcagctaagacatccaaatttagtcaagttgattgggtattgctgcgaagatgaccacaggctgcttgtgtacgagttcatgtttcgaggaagtctagaaaaccacttattccgaagtaagaatccaactccttttcatcacttcatgaatgatatcatggctgaatagtttctgtgatcacactttttaaatatatatgtttctctctataatgcaatcaagcaccatagctgaagttgaccatattgtggataatagagttgcaacgttgttctattaaatatcgttgatatgagcaaatgatcagcgctctagaacctggtatggtaggatttcatttcgacttgctgttcacaaggattccaaattgtccagagctttttgactgaacaaccgatttaactgttcgctgctagaccctcagtaagtttaggccctcttcatatttatcattcttggaaaaccttattgacgtgtttttaacaagattgcccaaagtgtccagttaaccatctgaatgattttctttgttggtatacttaatagaatcattcgtgatagttaactaccatgcatagagtatgcgagctacccatacttatctgctaaatatcttctgtattttttcttccaaaatatatgaatactattgaatactggcatgtatgatttgaaatgttggcacggtatttcatcaattcatttgtaggttaagtaaattatatgccaaataggcccaacactgaatattaggctgactaaagattatgctcaactatattttttttcttgtacattgtggtgaaattgtattcgagagtaggaaatttcctgacattgtctgtgcttttcatttttcttctcagggacagctactccactatcgtgggctactaggatgtcgattgcattaggagctgccaaagggttagcttgcctccacaatgctgaaaggccaattatctacagggatttcaagacatcaaatattctgctggactcagttgagtagcatttcttgccaatatcttgttttttttcctttctcttctatgcatctgttgggaatatgtaaatatttttcataatagcatttatcttttatttgcacttacacaggattatactgctaaactctctgactttggtctggcaaaagctggcccagaaggcgatcaaacccatgtatcaactcgggtgatgggaacatatggttatgctgcccctgaatatgtgatgactggtactctcctcattttatcttttttaagttttcttcattttttttttctgaatagcgttattacccttcatcaaaatgtgaccagaaagtttactaagtgatatgcaagtatgcagtttctgttttgcccttgcaatttcatctgatgtatatatacctattgggcaggtcacttgactgctagaagtgatgtctacagctttggtgttgtccttcttgaactcttgactgggcgtaagtccatcgacaagtcacggcccagcagggagcatagcttggttgactgggccctcccgaagctgaacgacaagaggaggcttctccaaatcattgacccaaaactggagggacagtattcagttagagctgcccacaaagcctgcagcctagcatactactgcttgagccaaaacccaaaggcgaggcctcttatgagcgacgtcgttgagactcttgaaccattgcagggcagtggtggaagtgatggagctgttcaatctgttcttggcagtggccttccgagctacagagtaaaccgcagactaatgacgaacagagtccactgtagggcgcttccgaaccccaagtgctcccctgctgtcccagcatgcagggtgagatgagagtgtgctgtttcagttgctcctggaataggttcagttgtacattgcaagtctaaaccgttgatggtgcgtgagtgtgcacacctgcgctgtgtgcttttgggttttatcttttttcttttttttttttggctttctcccccagttttcaacctgtaaatttgctctgcatggtggtgcttgtaaggccctctaattttcagtggtcttatgtgttgttgactgtgttttgccctgccaaaaccggcaaggtttaaccccagaaatgaaaggctgaactaagagtgcaacgatggttgctatgctac</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0121400, RefSeq:Os11g0121400