Os11g0130400

From RiceWiki
Revision as of 21:14, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0130400

Description

Harpin-induced 1 domain containing protein

Version

NM_001072183.2 GI:297611161 GeneID:4349673

Length

1246 bp

Definition

Oryza sativa Japonica Group Os11g0130400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1378976..1380221

Sequence Coding Region

1379318..1380148

Expression

GEO Profiles:Os11g0130400

Genome Context

<gbrowseImage1> name=NC_008404:1378976..1380221 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1378976..1380221 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgaccgcgtccaccccatgcccgctccaccgccgccgtcctcctcccctccgctggaacacgccgccgccgccacggagaccacgccgctgcaccccagcttccgcggcgcgcggccgccgtcgccgggcacgtacatcatccaaatccccaaggaccaggtcctccgcgtcccgccgccagaccgcgcgcgccgctacaagaagctcgcggcgaggcccgcacgccgccgccggctccgccacgcgtgctgcgccgccttctgcgcggccctcctcctgctcctcctcgccgccgccttcgtcggcgccgtctacctcgtcttccgcccccgcgcgccgtccttctccgtcgcctccctctccatccgcggactcgacgccctcgccgtgtcatcgttgactccgcagatcgacgccgccgtgcgcgcggacaacggcgccaacaagaagaccggcatcgactaccgcggcggcggggaggtgaccgtctcctacgccggcgagcggctcgccgccgggccgtggcccgcgttccaccaggcgccgaggaacgtgacggtgttctcgacggcgttggccggaggaggcgtgagcttcccggaggagcagaggaagcggctcgccgcggagcaggccgccggcgcggtgcccctgacggtggaggcgatcgtgccggtgaggttgaggttcgggaaggttctccggacgtggacggtggacgtgaagacgaggtgcgaggtgacggtgaacaagctggcggcggcggcgccgccggcgaacagggggtgcagggtcaaggtccggccgctctggtggtggtggtga</cdnaseq>

Protein Sequence

<aaseq>MADRVHPMPAPPPPSSSPPLEHAAAATETTPLHPSFRGARPPSP GTYIIQIPKDQVLRVPPPDRARRYKKLAARPARRRRLRHACCAAFCAALLLLLLAAAF VGAVYLVFRPRAPSFSVASLSIRGLDALAVSSLTPQIDAAVRADNGANKKTGIDYRGG GEVTVSYAGERLAAGPWPAFHQAPRNVTVFSTALAGGGVSFPEEQRKRLAAEQAAGAV PLTVEAIVPVRLRFGKVLRTWTVDVKTRCEVTVNKLAAAAPPANRGCRVKVRPLWWWW </aaseq>

Gene Sequence

<dnaseqindica>74..904#gccacgcgccgctctcactcggtcactctcactcttcatttcgtcgaacacctttgcctcacaaccaccccccatggccgaccgcgtccaccccatgcccgctccaccgccgccgtcctcctcccctccgctggaacacgccgccgccgccacggagaccacgccgctgcaccccagcttccgcggcgcgcggccgccgtcgccgggcacgtacatcatccaaatccccaaggaccaggtcctccgcgtcccgccgccagaccgcgcgcgccgctacaagaagctcgcggcgaggcccgcacgccgccgccggctccgccacgcgtgctgcgccgccttctgcgcggccctcctcctgctcctcctcgccgccgccttcgtcggcgccgtctacctcgtcttccgcccccgcgcgccgtccttctccgtcgcctccctctccatccgcggactcgacgccctcgccgtgtcatcgttgactccgcagatcgacgccgccgtgcgcgcggacaacggcgccaacaagaagaccggcatcgactaccgcggcggcggggaggtgaccgtctcctacgccggcgagcggctcgccgccgggccgtggcccgcgttccaccaggcgccgaggaacgtgacggtgttctcgacggcgttggccggaggaggcgtgagcttcccggaggagcagaggaagcggctcgccgcggagcaggccgccggcgcggtgcccctgacggtggaggcgatcgtgccggtgaggttgaggttcgggaaggttctccggacgtggacggtggacgtgaagacgaggtgcgaggtgacggtgaacaagctggcggcggcggcgccgccggcgaacagggggtgcagggtcaaggtccggccgctctggtggtggtggtgatcgccggcggcggcggcgccgccgccgctgatggttggatgggtagtacattaacggctacagcctagtatagctagtaacagctgtgcattgaacagagagatattacattacttattatacctgtgaattgaattaatttcataattagtgtccaattttgtggtgcatttcgagctgttggtgaggagattaatggattaccaccagtgtagcattttgcatgttgcagatgtaattggtgaaatactgatggttttctctgttttctgtttgttcaaatggagaatgaattaatcggatatttactcagtttcagatgtaactgatgaagttttggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0130400, RefSeq:Os11g0130400