Os05g0529000

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Revision as of 10:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0529000| Description = Protein of unknown function DUF502 family protein| Version = NM_001062654.1 GI:115465038 GeneID:4339401| Length = 32...")
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Gene Name

Os05g0529000

Description

Protein of unknown function DUF502 family protein

Version

NM_001062654.1 GI:115465038 GeneID:4339401

Length

3251 bp

Definition

Oryza sativa Japonica Group Os05g0529000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26340847..26344097

Sequence Coding Region

26341074..26341171,26341284..26341410,26341580..26341677,26341769..26341936,26342297..26342406
,26343065..26343117,26343809..26343976

Expression

GEO Profiles:Os05g0529000

Genome Context

<gbrowseImage1> name=NC_008398:26340847..26344097 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26340847..26344097 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgacgagaagtctccgctgagccagatgggcagccgcgaccgggaccgggagctcctcatccccgtctccggcggcggctcggcccccggagacggcgacggggacggcgacagggcggcctcctcctccgcgtccgccgctctgtcctcctccagccgcgaggcttttcataaggtggtccgaagttgggcttcaaagaaattcatgactggatgtgtaattctcttccccatagcaataacattctacatcacatggtggttcattcattttgttgacggattcttctcgccaatctatgctcaactgggaatcaacatgtttggtcttggctttatcacttctgttaccttcatatttgtggttggagtcttcatgtcatcttgggttggagcatctgtccttagccttggtgagtggattattaagcgcatgccacttgtccgtcatatctacaatgcatccaagcaaataagtgctgcaatatcaccagatcagaacaaacaggcattcaaggaagtggtcatcataaggcatcctcgtattggagaatatgcatttggtttcattacatcatcagtctctctccagagttatactggtcaagaggaactgtactgcgtgtatgtcccaaccaaccatctttatattggtgatatcttcatggtaaattcgaaggatgttataaggccaaatctttctgtccgtgaaggcatcgaaattgttgtatctggtggcatgtcgatgccccaaattctatcaactctggacccacagacaattcttggagacagaacaggagcaagcagaagctga</cdnaseq>

Protein Sequence

<aaseq>MGDEKSPLSQMGSRDRDRELLIPVSGGGSAPGDGDGDGDRAASS SASAALSSSSREAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIY AQLGINMFGLGFITSVTFIFVVGVFMSSWVGASVLSLGEWIIKRMPLVRHIYNASKQI SAAISPDQNKQAFKEVVIIRHPRIGEYAFGFITSSVSLQSYTGQEELYCVYVPTNHLY IGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPQTILGDRTGASRS</aaseq>

Gene Sequence

<dnaseqindica>2927..3024#2688..2814#2421..2518#2162..2329#1692..1801#981..1033#122..289#gaaggggagacgccctcatctcgctcgcgccgagccgcatccccgtttcgcagcgatcgcgacgaccgaggccgcccgggaggtcgcggcggcggcggcggcggtggcagggaggtgcccgatgggcgacgagaagtctccgctgagccagatgggcagccgcgaccgggaccgggagctcctcatccccgtctccggcggcggctcggcccccggagacggcgacggggacggcgacagggcggcctcctcctccgcgtccgccgctctgtcctcctccagccgcgaggtgcccatcccagcccagttctctcccccttccacctgaatcccttagggtttacttttcctcattttaattcagctgcagtttaattctgtatatttttggcttataatagcttagtgcacgattttgctgttttgttcgttgtgtctcttatcctgttgtagattaggggtttactggtgagatgtaaggtggaaaaaatatcactattgcagtttatgtgataggatatgcttcattgttgtgtttgggagctaggataacgatactatgcccatgtttgatgtggtgaacccagttatttcatattagtgatgagctcacttgcttgatatatggtatggtattgctcatttagtctgcttagaaagtaaaggtgagaagtcgcagcttcagttgatattaccacttgaacagagcaagatgttatgtaaattatttatttggttatgatatttggaaattcctaaacctcctcgattgctcaagtgaaccgcaatgacagctatttttcaaaaaacattgttcaacaaaaagttccaagtgtaacgtttatgttcttattcctgcttttcgcatctgatacttgccttgcacaaaaagtatgctatacagatttgacatctctcctcatattgttgaagcctgataatcccatgttctgattccctttacgttttctatgatgcaggcttttcataaggtggtccgaagttgggcttcaaagaaattcatgactggatggtaagtctctgaaggatgctgcctaataaatttctgctcgttcttctatgcatctgagtactgtctaccagtgaacagtataattctttctagctaaaagaaagttctatttatgctacagtgtctgtgatggtttatcatacatgacacggttgttgtgggtatgtattatagcatacttaaggaatgtggttacaattcaaaaggtcaaatttatgggttccagaattaataaaatcttccagaattcaaacttctgttctctttgcagaactgagagtaattcaggcaagtgctttggcaagatcactaggttcattgctggttcgtatgatagtgggtgcctatttcttggaatctgggatatagtctttattttttaaaaggaaatcagcttggagaaattggttaaatgccaagatggtcacgtttggttggaagttatgtagagttatagattgatactcgtgtggttgcttgattagtgattgtgtatatattcacatggcaatgacaacgatgaagcacacaattagggtttaacactgttttcttatgctatgataatttcaatgatagtatatgaatttatctttccacatgctagtttatacactaagatgtttgtttgttcattttcttttccggatacttccagtgtaattctcttccccatagcaataacattctacatcacatggtggttcattcattttgttgacggattcttctcgccaatctatgctcaactgggaatcaacatgtttggtatgtgaactcaccaaatatttctgaaatagttgattgctcatgttataatttctttcccccaaaacagcattcattgtgcttttagtttagtgctgagtcctttacatgttacacatttctgtttacattttatgaaaaagttttgtgctggtacaatgttaggtgtaataattctggtatagattagtcctagctgatagttggtcagaggtctgggaagcttggcatttgaatgatcaatgatgtagagcaaattcattttatgtttgaacttgatcgcatatgagtggaatgtgggatgcttgttgcctattacttttttttttcaccctatttattctacaaatgaatcctcaggtcttggctttatcacttctgttaccttcatatttgtggttggagtcttcatgtcatcttgggttggagcatctgtccttagccttggtgagtggattattaagcgcatgccacttgtccgtcatatctacaatgcatccaagcaaataagtgctgcaatatcaccaggtaaacctactgtcgcactaatagcatgtctgcaaattagcttgggttcaaattaactctgctgatttctaattaactctggtttctacagatcagaacaaacaggcattcaaggaagtggtcatcataaggcatcctcgtattggagaatatgcatttggtttcattacatcatcagtctctctccaggtaagacgactattaactattatttcgcttgagattacattacattaagatgtttatgtcatttgtacaaaaataataaaattgttgatatccgttcagcttttatattagcatgtagtaaatgtctggtttcagtacctaatttcatctcatcatcacgtggtaacagagttatactggtcaagaggaactgtactgcgtgtatgtcccaaccaaccatctttatattggtgatatcttcatggtaaattcgaaggatgttataaggccaaatctttctgtccgtgaaggcatcggttagtcataagcatgtcctttccgtgtcccatttccacttgatattcatgaaggtagttcaactttgttctgttataaaattccttgatttattcttaacacgtcatgcagaaattgttgtatctggtggcatgtcgatgccccaaattctatcaactctggacccacagacaattcttggagacagaacaggagcaagcagaagctgagatctctccttggttgcaacttgactaaaattatcagaccaagtacagtgaactagatcctgagcaacacgatgtattagtggtctgtcgagctctaggatcacaaggatctgtaaattagtagaagtaggtgactcatatattccttgttcatccgttggcagtttgtaccatggtttgcactttctaccacgttctatacaagaatgcttcgtagttgtaacgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0529000, RefSeq:Os05g0529000