Os05g0530701

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Revision as of 10:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0530701| Description = Leucine-rich repeat, plant specific containing protein| Version = NM_001187570.1 GI:297724270 GeneID:9271295| Length...")
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Gene Name

Os05g0530701

Description

Leucine-rich repeat, plant specific containing protein

Version

NM_001187570.1 GI:297724270 GeneID:9271295

Length

1416 bp

Definition

Oryza sativa Japonica Group Os05g0530701, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26418320..26419735

Sequence Coding Region

26418320..26419735

Expression

GEO Profiles:Os05g0530701

Genome Context

<gbrowseImage1> name=NC_008398:26418320..26419735 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26418320..26419735 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgtagcctccgtcgtgctcctcctccacctcctctccatggcggcggcggctacggcggcgctggccatggaccccgccgagagggagacgctgctgctcgtcatggaggccgtctcctccgaccgcgagtggcgctccgtcggccctgacccgtgcggctccccgtggcccggcctcgagtgcaagcctgtgccggccgccgggaacgtgtcgtcggcggcggcgaggctgcacgtcacgcggctggacttcggggtggcgccgaacccgacgtgcaaggacggcgcggcgttcccgcacctcgcgttcgcgctgccgcacctccagtcgctgttcctcgtcgactgcttcaagaacccggcggccaccacggcgttcacgctgccgccgtcggccaacctcacctcctcccgcctgcagcagctcagcgtccggtccaacccgtcgctgtccggcacgctgccgccgcagctgtccagcatccggtcgctgcaggtgctgaccgtgtcccagaacgcgctcatccgcggcgaggtcccgcagggcatcggcgagctcaagagcctcgtgcacctcgacctcagctacaactcgctcaccggcacgatcccgagccgcatcggcgagctccggagcttggtcggcctcgacctcagctacaactccttctccggctccatcccgggccagctcggcgacctcgccatgcttcagaagctggacctgagctccaacaacctcaccggcggcgtcccggccaccatcaccgggctgacatctctcaccttcttggcattgagcaacaatggcctaagcggccacctcccggccggcctctccgacctccttgacctccagtacctgatcatggagaacaacccgatgggcgtcccgttgccgtcggagctcggcgacattgcgcggctgcaggagctccggctggccaactccggctactcggggtcgatcccggagacgctcggccggctggcgagcctgacgacgctgtcgctggagaacaacaacctcaccgggaggatccccgccgggctgagccggctcaagcggatgtaccacctcaacctgagcaagaacgggctggacggcgtcgtgccgttcgacggcgcgttcctcaggcgcctcggccggaacctcgacctcagcggcaacccggggctgtgcgtcgacggccgcgccgtcttgcaggccgacgtcggcgtcggcgtctgccgccgcgccggcgacggcggggacatcgcctccgtgtccgccgccaccgacgtactatcagttggcacattgttcaggcgagatggacaactctggctcgccggcggccgctggtcagcgctgctgctcatccggccggtcgccgtggcgctgtgctgcagctgctgccttctgctctga</cdnaseq>

Protein Sequence

<aaseq>MPVASVVLLLHLLSMAAAATAALAMDPAERETLLLVMEAVSSDR EWRSVGPDPCGSPWPGLECKPVPAAGNVSSAAARLHVTRLDFGVAPNPTCKDGAAFPH LAFALPHLQSLFLVDCFKNPAATTAFTLPPSANLTSSRLQQLSVRSNPSLSGTLPPQL SSIRSLQVLTVSQNALIRGEVPQGIGELKSLVHLDLSYNSLTGTIPSRIGELRSLVGL DLSYNSFSGSIPGQLGDLAMLQKLDLSSNNLTGGVPATITGLTSLTFLALSNNGLSGH LPAGLSDLLDLQYLIMENNPMGVPLPSELGDIARLQELRLANSGYSGSIPETLGRLAS LTTLSLENNNLTGRIPAGLSRLKRMYHLNLSKNGLDGVVPFDGAFLRRLGRNLDLSGN PGLCVDGRAVLQADVGVGVCRRAGDGGDIASVSAATDVLSVGTLFRRDGQLWLAGGRW SALLLIRPVAVALCCSCCLLL</aaseq>

Gene Sequence

<dnaseqindica>1..1416#atgcctgtagcctccgtcgtgctcctcctccacctcctctccatggcggcggcggctacggcggcgctggccatggaccccgccgagagggagacgctgctgctcgtcatggaggccgtctcctccgaccgcgagtggcgctccgtcggccctgacccgtgcggctccccgtggcccggcctcgagtgcaagcctgtgccggccgccgggaacgtgtcgtcggcggcggcgaggctgcacgtcacgcggctggacttcggggtggcgccgaacccgacgtgcaaggacggcgcggcgttcccgcacctcgcgttcgcgctgccgcacctccagtcgctgttcctcgtcgactgcttcaagaacccggcggccaccacggcgttcacgctgccgccgtcggccaacctcacctcctcccgcctgcagcagctcagcgtccggtccaacccgtcgctgtccggcacgctgccgccgcagctgtccagcatccggtcgctgcaggtgctgaccgtgtcccagaacgcgctcatccgcggcgaggtcccgcagggcatcggcgagctcaagagcctcgtgcacctcgacctcagctacaactcgctcaccggcacgatcccgagccgcatcggcgagctccggagcttggtcggcctcgacctcagctacaactccttctccggctccatcccgggccagctcggcgacctcgccatgcttcagaagctggacctgagctccaacaacctcaccggcggcgtcccggccaccatcaccgggctgacatctctcaccttcttggcattgagcaacaatggcctaagcggccacctcccggccggcctctccgacctccttgacctccagtacctgatcatggagaacaacccgatgggcgtcccgttgccgtcggagctcggcgacattgcgcggctgcaggagctccggctggccaactccggctactcggggtcgatcccggagacgctcggccggctggcgagcctgacgacgctgtcgctggagaacaacaacctcaccgggaggatccccgccgggctgagccggctcaagcggatgtaccacctcaacctgagcaagaacgggctggacggcgtcgtgccgttcgacggcgcgttcctcaggcgcctcggccggaacctcgacctcagcggcaacccggggctgtgcgtcgacggccgcgccgtcttgcaggccgacgtcggcgtcggcgtctgccgccgcgccggcgacggcggggacatcgcctccgtgtccgccgccaccgacgtactatcagttggcacattgttcaggcgagatggacaactctggctcgccggcggccgctggtcagcgctgctgctcatccggccggtcgccgtggcgctgtgctgcagctgctgccttctgctctga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0530701, RefSeq:Os05g0530701