Os05g0534600

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Revision as of 10:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0534600| Description = Conserved hypothetical protein| Version = NM_001062685.2 GI:297604811 GeneID:4339434| Length = 7463 bp| Definition ...")
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Gene Name

Os05g0534600

Description

Conserved hypothetical protein

Version

NM_001062685.2 GI:297604811 GeneID:4339434

Length

7463 bp

Definition

Oryza sativa Japonica Group Os05g0534600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26605921..26613383

Sequence Coding Region

26607501..26607528,26607613..26607658,26607776..26607819,26608763..26608885,26609044..26609158
,26609481..26610241,26610339..26610745,26610832..26610934,26612676..26613178

Expression

GEO Profiles:Os05g0534600

Genome Context

<gbrowseImage1> name=NC_008398:26605921..26613383 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26605921..26613383 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacagggagaaggcggaggagacggaggaggagtacgagagcgacctcgacgacgcgcccctcccggcggtgcggcgccgggacgcggcgagcgacaactacgaggaggaggaggaggaggaggaggaaggggcgaggccctctccgcctacgaaggccggatccgacgcggaatccgacgggcaaggcgccgccgaggtgtacgacgacgacgacgcgtacgaagatgacgaagggtacgaggaatacggggaggtgtacgaggagttcgagcaagggcgaggcgttgcgggcggagtggccaccggggcggtggccgcagcgggggaggaggcggggatgggtatgaagggggaagcggaaggtgaggcgtcggcggcagcggcggagggagaggaggggaagaaggggagcgagccctatgccgtcccgacggctggcgccttctacatgcacgacgaccgcttccaggaggcccgtggccatgggcgccaaaggagaatggtgggtgatagacggctgtggaatgctaaagaggatcaagcgtgggtccatgacagatttgatgaaatgaatttacatgatttccataatgactacacaagaagaaggcccagaggtcgatttagaggacgtggtggtgcacctgttggtaaagttcgtggtggtagccgtgataatttcagaggcaacaggtcgcagacatactatcgtgatggtgctaagaactacatatacgttccgaaagaacctcatagttaccatgataacaccaagaaggttcaacaggttctgaatgataatggcaagaatagaaccatcaaaccacctaatcctcgtgatggcgatgccaacaatttcgattttgttcgaaaagagtctcgccctctttatggcaatgccaaaagtaataagagtgcaccgagagtagttcgaggaagaggctctaaacgttaccaaccacattggaggagtaccgctgagatatcttcagagcataataataaatcacaaaatcttgaaaacacttcttcaaatgcaaacttgggaaaacaccaacatcaagcttcaaattctcaaccagaacgaggatttccgatgaagcagagctttgcatcaaatttgaattcagcttcacctcccttttacccttctaggccatctcatcaggaactcccagtgagtcagaggggggatggacaacccagtaccactactagacacttctcatcccccattggtatggagcatgtctctccaaccccacagtatggccctctcttaagagggaaagcctttgtaccgtctgctgggcatggcaagttgcatgctgaagttcctataaagggcatggatcatccttcatttcattcatctacatcatcatcaactagtcaatttcctatagctactaatcaggtcactggaaattcggctaagtccccacacccaattgtccaacaaaggttggttcaatcatttaatcaatccacaccaaagatgcctggtcagatgtttgctgcgcaatttgctagcagtgataaattgccatcttccatgcaatctacatcaacaattttgactgaaggcactgaaatttcttcacctcatggttccaacaaatctaatactagattgatggcaaagggacaacatagtgaccagggagaagaacatgcttcttttatgtatggtggagctcaagttcttgggactacaggatcacttggtgaccaaaatttccatggaacccctgcactatttccagttatgcagtttggaggccagcatccaggtgggactggcgttccctcaattggcatggctctaccaggatttgtgtctcaacaacaacttggtctgagcaattctgaaatgacttggctaccgatattggctggtgcttctggagctttgggagcaacgtatggttcaccttatattactgtagatggcagctattatccccgaacttctgaacatgcatcttcatcagtttctttgagagaacccagtgcctcttctcagttgaagtcacaagaaataactgaggctttaaatgatgaacttagtcaacgccaacataaacctcggagatattcggaaatgaactttggcaaatga</cdnaseq>

Protein Sequence

<aaseq>MADREKAEETEEEYESDLDDAPLPAVRRRDAASDNYEEEEEEEE EGARPSPPTKAGSDAESDGQGAAEVYDDDDAYEDDEGYEEYGEVYEEFEQGRGVAGGV ATGAVAAAGEEAGMGMKGEAEGEASAAAAEGEEGKKGSEPYAVPTAGAFYMHDDRFQE ARGHGRQRRMVGDRRLWNAKEDQAWVHDRFDEMNLHDFHNDYTRRRPRGRFRGRGGAP VGKVRGGSRDNFRGNRSQTYYRDGAKNYIYVPKEPHSYHDNTKKVQQVLNDNGKNRTI KPPNPRDGDANNFDFVRKESRPLYGNAKSNKSAPRVVRGRGSKRYQPHWRSTAEISSE HNNKSQNLENTSSNANLGKHQHQASNSQPERGFPMKQSFASNLNSASPPFYPSRPSHQ ELPVSQRGDGQPSTTTRHFSSPIGMEHVSPTPQYGPLLRGKAFVPSAGHGKLHAEVPI KGMDHPSFHSSTSSSTSQFPIATNQVTGNSAKSPHPIVQQRLVQSFNQSTPKMPGQMF AAQFASSDKLPSSMQSTSTILTEGTEISSPHGSNKSNTRLMAKGQHSDQGEEHASFMY GGAQVLGTTGSLGDQNFHGTPALFPVMQFGGQHPGGTGVPSIGMALPGFVSQQQLGLS NSEMTWLPILAGASGALGATYGSPYITVDGSYYPRTSEHASSSVSLREPSASSQLKSQ EITEALNDELSQRQHKPRRYSEMNFGK</aaseq>

Gene Sequence

<dnaseqindica>5856..5883#5726..5771#5565..5608#4499..4621#4226..4340#3143..3903#2639..3045#2450..2552#206..708#ggttttaaatatttttttaatcgtatccaacttctctcctccagtcctctccctcccgtagaccgtggatatcgtagaacaaacggaagaacacgagaagcctctcgaagcttccagaatcccgattccaccagattcctcccccccccccccggagccctaattctctcgcgcggttcgtcccgcgacctcccggttcctgccaatggccgacagggagaaggcggaggagacggaggaggagtacgagagcgacctcgacgacgcgcccctcccggcggtgcggcgccgggacgcggcgagcgacaactacgaggaggaggaggaggaggaggaggaaggggcgaggccctctccgcctacgaaggccggatccgacgcggaatccgacgggcaaggcgccgccgaggtgtacgacgacgacgacgcgtacgaagatgacgaagggtacgaggaatacggggaggtgtacgaggagttcgagcaagggcgaggcgttgcgggcggagtggccaccggggcggtggccgcagcgggggaggaggcggggatgggtatgaagggggaagcggaaggtgaggcgtcggcggcagcggcggagggagaggaggggaagaaggggagcgagccctatgccgtcccgacggctggcgccttctacatgcacgacgaccgcttccaggaggcccgtggccatgggcgccaaaggttccggcctttcaaccttcaattgctgcttgatttgctgttgtttccttatatatctagggtatgatgatatgatctagagaacttggtagcctagtttcaaccttcactagtttggtaaccattagtgttctctgaaaccactgcttaagtgcattgcgtgttcaatagttcaattaatatcatctaagttgataacacgagtgtgtcatgctaactagtcctgtggaattgttagaagaggctaaagtttgatatttatatgtgcagtagtagtgtagtatttgatagatacaagtcataaaacggcttaaatgtatttattttcgcaattggtctattttggttctctagatttggtacggttgctcgttgttgcatctcttcgttatgatgtcctgcctaagtttcctttacaggataaccaaggtctgtgagtagcttattgagtaattccccagcatatgataatacatgggtttataacattgaactataactcgtaaagcacgcaaaacatgagctaaaataacaacacgaagtcatgtattcacaggcattactttacagagttgattgttatatgccaagtcgcaaacatgaaacaaaaatgaaactttgcctacaagtttttaaatctggtgtttcatgtgaaattgatttagtattaatgcaaattggacacacttattaaaaagtagaagcgtttaactttgaagtctgatcttgttcaagtgtttctactagaacaatacctacatgatctgaaacatggtctactaggatacactactacaatatagatgagactggtaaggtatggcatggctatgccaataccatgatacattatctctttactattttaaaaagaaaagttgtgtataatggcgagctctacacccacaagtactctagaagatcttttcaggttagatatagtttgcaagaactttaaaaaaatataatattgtagatcttctaaaaatacactattatcatgtaggttgttgatcgtttttacgtagtcatgtctaaaaaattttagatttatcattttcttaagtttaacttatggatcttatactacatttttttaatgctagttacctcatacctgaaatgattaatcagttttagtgcatcagatgaacgaatgcatcacagttgaattcaagcatagttgaaatcatctgttttgaggagggccaatcgcaaatagcttggattgaaccaaatccaaaattttaccttttcttttgcatgctcccctagtttgggaagcatgaatcttaccaagttgggcattgcttagatcaatgtcaaccaacagaaaaaagagaagtaagcccatcagatactaaaccagtaaacactccattgaccattccatactgtacatcattctataattatacacaataattatgatttgtggtaaaaattgttgatagtgtggtagaatgaattgaagtgtattgaacaaatactggaaaatttgtctcaacgaactgaataataggttgtatttactgtttttttcccttttaaaagtagttgtttgactggtgtgctagtgttccagtgtacaaactggatgctgaacccaactaagctagacaagtttgattatgttgaatgctttatctcaattttaaggaatccaatatgatactctgtttcattctctggacatccatgatctatattttaatttctgctacccatgttgtcatttcaggagaatggtgggtgatagacggctgtggaatgctaaagaggatcaagcgtgggtccatgacagatttgatgaaatgaatttacatgatttccataatgactacgtgagtatcatattgtctttttctgtgtgttgaactattgattcatctttcttaccaagatgcttcttttattgattgtactatagacaagaagaaggcccagaggtcgatttagaggacgtggtggtgcacctgttggtaaagttcgtggtggtagccgtgataatttcagaggcaacaggtcgcagacatactatcgtgatggtgctaagaactacatatacgttccgaaagaacctcatagttaccatgataacaccaagaaggttcaacaggttctgaatgataatggcaagaatagaaccatcaaaccacctaatcctcgtgatggcgatgccaacaatttcgattttgttcgaaaagagtctcgccctctttatggcaatgccaaaagtaataagagtgcaccgagagtagttcgaggaagaggctctaaacgttaccaaccacattggaggagtaccgctgagatatcttcagagcataataataagtgagtggaaggtttcttcttatgtgctatctgtgtctttgttttgttaatatagaacttactgtggtactttttgtttttgttgctcatacttcagatcacaaaatcttgaaaacacttcttcaaatgcaaacttgggaaaacaccaacatcaagcttcaaattctcaaccagaacgaggatttccgatgaagcagagctttgcatcaaatttgaattcagcttcacctcccttttacccttctaggccatctcatcaggaactcccagtgagtcagaggggggatggacaacccagtaccactactagacacttctcatcccccattggtatggagcatgtctctccaaccccacagtatggccctctcttaagagggaaagcctttgtaccgtctgctgggcatggcaagttgcatgctgaagttcctataaagggcatggatcatccttcatttcattcatctacatcatcatcaactagtcaatttcctatagctactaatcaggtcactggaaattcggctaagtccccacacccaattgtccaacaaaggttggttcaatcatttaatcaatccacaccaaagatgcctggtcagatgtttgctgcgcaatttgctagcagtgataaattgccatcttccatgcaatctacatcaacaattttgactgaaggcactgaaatttcttcacctcatggttccaacaaatctaatactagattgatggcaaagggacaacatagtgaccagggagaagaacatgcttcttttatgtatggtggagctcaagttcttgggactacaggatcacttggtgaccaaaatttccatggaacccctgcactatttccaggttcgtatttttactattcacacggcaatatagtaaccagagtgttaaatgagtaaacgattacatgggtgaggggaaaagaaataatccaatttctaaaggcttattcctccattgattagagggtgcatgctatgtgccttgagtgaaaatgtttacagtgatgttagtggatttataatctactttgaacttctggtttgatttctgaaaagtagtgttattttcagtagactgccaccccattggagtgaactgaaccaagtttttgtttccaaaaccattctgcaatatgcctttagcttttttttttcccatacagttatgcagtttggaggccagcatccaggtgggactggcgttccctcaattggcatggctctaccaggatttgtgtctcaacaacaacttggtctgagcaattctgaaatgacttggtaatgactctttgaactcttagaatagttgtttgctttatttttctctacctccaattggtatgatgtggttatcacattgtacttcatttagatgttagcacactgctgtttgctcaggcctaatttttttgtgggttgtatctgaatgaaactaggctaccgatattggctggtgcttctggagctttgggagcaacgtatggttcaccttatattactgtagatggcagctattatccccgaacttctgaacatgcatcttcatcagtttctttgaggtatgttagtctaatactctaatatgattcatgttgcaagaatttggatttcgcacacaaggcatatatactgttgagaattgagataatgttaatttaatgatgattcatccttttgttaaattctggttctgaggtatgatcacctattaccaacatgttgacgacaataaataatatgctatgaactactccctccgggttgataatacttgtcgttttggacaagggcacggtctccaaaaaaaaactttaaccattattttccattataatatgtataaaagtgtgaaaaaatatatgattttattaaagtactttttaagactaatctatacatgtagtcaccatatttgaaagacaaatattttaaaaatgattcataatcaaatattctaaagtttgatctcacccttgtctaaaacgacaagtaatatcaacccggagggagtagtagttaatgcccttacatagccctaatctgaggacttatattctatgatttccctctaccaatgtgcttgctttagctgtcttcctgtgggtactgccgtactggttgaccagccgtatcatcagaataggttttggtagataattggagtaacactactctcctgatctggagaggttgatgattactttatttaggttgaataataattgttttgctgcgatttttctgttttgttgtcttgtgcaactgcaagggggcaatttgaatggcatggggatacaatcattatgcatgcacctagcattttcctattatacgtagtctaattgaacaaatgatcgtcattgatttctgtcccagccttcatcaccaaccaccaacacaacatgcacaaacagaaaaatgttaatgagaatacaaaggatcctagtgcttcaatcatcctagtgctttcgatagtaatgattctttctgtttcttttacagagaacccagtgcctcttctcagttgaagtcacaagaaataactggtaaaggcatcttccatccctttccatttattttgtcttctcaattggtatttattttggggtatcttctcctatttttgccacataaatgtaccgaggccttttcctcttttgcagaggctttaaatgatgaacttagtcaacgccaacataaacctcggaggtatgttaaagtttatgtgttctgtttgctgtatgctttctgttctaatactatgtgttaataccatgttgtgtcttgttacagatattcggaaatgaactttggcaaatgaacatagtgacgatggtgttaatgaggacttcatctgttagatttgggtctgtgcaagacttctatctcaaggcctttctgggtccttgcaacacttcagtgtctgatctgtagcactttgggctgtatccagaatgaatgccaggtacgcatgacttctgttgttctttcattgtgttagactggtgttgttctgtggtcttgccctttcacccaaaccttgatcccttgagggtaacataaggaaaatcctttagcagtagacattagatgtctgttgtctttctattcatatatatctttcacttactatgtataataaggaaatttattttctggcattcacttcataattcttttatggtagattcacagtggcaaccaagtatggaacatgttttcatttgttaaggcttctgaagctagttcagagtcttattctattgattatccaagtttattatcacttagtgagctactaagaatttctgcagtgtttccatagatatctagtattttagtgaataaatatgagattgatattttctaattaaaggaggtaattgaatcgtagctaaaactagcttaacaacttgcaattgcttttggaagtatagtgtgtccgtttcttaatttggcatgctaagtccaaattgtggtataccctgaatctgtccttttctccatttccttcgtcacaactcataaacgaatacatgtctcctctcttctaactgcatttggttgatgagtgactggccatttttccacgagaaaagatatttcagcaagacactttaaatggctagatgtttgtattgctcttgtacctcaaccttggataggcagttgtcatgtatattgtgctcctacatgtgcccatgagcattttagaatcgtaggatatgctttgatttgacaaagttggtgctgctccttttcaggtttgacagttgaaggtgtttatatccttactatagtcatttgcagtgattattctgatgggcagttgctattgtgtaattaggtatgattttcgacaattgacgccatttgaatccttactatttgatggacgttctgaaccctgttaccctgtcaggtgagatttacatggtacaccgtccatgttgctattgatcatcttcacattggcatgcatatatgaataatgcgcgatggagaatacgtgaggtctctgttattgtaagctccttttcttggtgaaagagggggaatacaaggtggtgttgggtttgcttgtgttgctcagctgacttgatcactgtcggttaatccgttatgacattttgaagatctgctatgtgatgtgttccctttgctgaagatattgtcgcgatatactagttcggtacgtgttagtgttacacagagttctttctgttcagttcatactacttgtaactgtgtaagcaccaggtcttctgaattactacaattttaccattggtttccctttatagtggagtatgatattaacaactactacgtagaaagatgtaaaagtgagaaacttatgtgaatgttgtacatgcacgtcttataaaaaaatatttattt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0534600, RefSeq:Os05g0534600