Os05g0535300

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0535300| Description = Conserved hypothetical protein| Version = NM_001062690.2 GI:297604815 GeneID:4339439| Length = 2788 bp| Definition ...")
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Gene Name

Os05g0535300

Description

Conserved hypothetical protein

Version

NM_001062690.2 GI:297604815 GeneID:4339439

Length

2788 bp

Definition

Oryza sativa Japonica Group Os05g0535300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26641428..26644215

Sequence Coding Region

26641636..26641687,26642278..26642384,26643665..26644039

Expression

GEO Profiles:Os05g0535300

Genome Context

<gbrowseImage1> name=NC_008398:26641428..26644215 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26641428..26644215 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgatgcagcaggagcagacgcggccacgtcggctggtccaatcctgtaatgagtcggttgcttcactggctaaacgaaatggctcaccctgtcaacaaggcgatgattaccaaggtgtcaaaacaatgagaaatccatgggccttccttcctgaggtatcacagactcgcatggagcatgacgtgatttctgaagattcatcacatctaaggcagatgccaggacaccatcatgacaccatcaagaatgtgaagatcatggtcgagctaacttgtcatattcttgagaatgcaacatcacttgaaggtcttacactagacacaatatttgatggaaataataatcctgcagataggctatctgttcacgaagttggtcgttgtggccgcatacatagccctatggtcatggaagccaaaaacgcgctcttggctatcgagagatacatcgtcgggaaagtcccctctacagtgaagctggatgttctaaaaccctgcagctggtgccatacaaattcaagtgttgagtga</cdnaseq>

Protein Sequence

<aaseq>MSMQQEQTRPRRLVQSCNESVASLAKRNGSPCQQGDDYQGVKTM RNPWAFLPEVSQTRMEHDVISEDSSHLRQMPGHHHDTIKNVKIMVELTCHILENATSL EGLTLDTIFDGNNNPADRLSVHEVGRCGRIHSPMVMEAKNALLAIERYIVGKVPSTVK LDVLKPCSWCHTNSSVE</aaseq>

Gene Sequence

<dnaseqindica>209..260#851..957#2238..2612#gattccactcccctcccctcctctcctcgcgcagccgcgccacgccgcgccttgccgctgacaccggagcaagatcgagagagagcgcggcgtatcggggtgatctggtctccccgcgcgcgcgcgccgccctgctggtttcggaatcgaagaggagcagagagggcggcggggaagaagaggggaggtgaagcggcggcggcggctcatgtcgatgcagcaggagcagacgcggccacgtcggctggtccaatcctgtagtgagctcgtctctttgatccatcgccccatcggcctcttcgtcgcattgcatcgtgtttagtgtttctgtgttaatgccctggcgtccatagcttgtttagtataccgctattcttttttagagtatactccattcggttcatattataggtttaggtcgtttcgactaaattttagaaaaatacagcaatgtttccaacacaaaataaacatattatgaaaatatattaaaattttagttttaatgaaacggagtattatactgctgcaccgagacaaaaagaggagggtgtattatactgctgctttgggactgaactggaggttctttactactgttagtggctaagtttgattcgtttaggttaaatagcttaaaatctttctttggttctctggaagaaaaaaaagcttggatagtagatataagactgttgctttctttttctgattgagtatttcaatttgcagtctttaacagaagaatatgcgttcgtgcccaaaagttgcataacagaaacaaattagatgtatgcatgttttatactccattatcatcggtacctattgtcaccatgatgtgttgcagatgagtcggttgcttcactggctaaacgaaatggctcaccctgtcaacaaggcgatgattaccaaggtgtcaaaacaatgagaaatccatgggccttccttcctgaggtataaaattccgatacatcctggttcacttacctttacaagcacaatgttgaacttctctcccactatggtgtttttaggacatctggtatcatatacactccttattgccactacaagatgctgcacgtaccgcatgcgtgtctcagatatttctacgttcttggagatgccgtcccaatctcatcttcagtgcgaaaacattgggattgaatgacaattggttggaaaggaataaagtaataggagaactcaatggaaaagttgaccacattatgaaaaccactccggtgttggcttgaagacttttgggcttagatcctataatttggtcgacgcctgttatcttgattgttggctccagatagctgttacaccggcaattgaagaactcatccttttgctgtttccagaggacaaggcaaactactacgacttcccattctcacttttattcaatagaggtggaagctcgattaagcatctttatctcagctattgtgtcttccgtcctactggtggacttaattgcttgcgaagtctgtttctgtatgaggtgcgcattactgggcacgaattagggtgccttttttccaattcctttgtgttagagcagttggaactcacagattgcaaagagcttagttacctcaagataccttgcctgcttcaacggctcagcaagctggcaatgtatggatgggaagcatcacaagtgatggaaattaaagctccaaatcttttaaacttccattatgagggtaatctagcacgactatcagatggaggtctaccgtatgtgaagaacctaaccatagcttccattcgttggcataatgctatttattatgcctgtgcaaatcttccatccattgtgcccactattgaaactctcactgtattttcagttagcgaggtacattacgcaacttaagattatatcattagattccagcattatgcatatagcaatagtcataccttgaaatgtgattaatctcgacaatttatgcagattatcaatacgccgatcgcacctttaagatttctccacctcaagcaccttactgtttttcttcacacagtccctagggtcgtttccccaacatatgattatctttctttagcttattttcttgatgcatctcctgccttggagactttcactttgaaggtaagtaaagttttcacgtgtaagtaaattttaatatgcggaaatatatatctatcatatatagtggaactatttgttgaaatattctctgctggttcatatgcaggtatcacagactcgcatggagcatgacgtgatttctgaagattcatcacatctaaggcagatgccaggacaccatcatgacaccatcaagaatgtgaagatcatggtcgagctaacttgtcatattcttgagaatgcaacatcacttgaaggtcttacactagacacaatatttgatggaaataataatcctgcagataggctatctgttcacgaagttggtcgttgtggccgcatacatagccctatggtcatggaagccaaaaacgcgctcttggctatcgagagatacatcgtcgggaaagtcccctctacagtgaagctggatgttctaaaaccctgcagctggtgccatacaaattcaagtgttgagtgatacggattgtccaatatttaatcgtgagctgttgcttaggtgtggctttttcttgagctactgaatctacccgttgttttgagttttgtattatttttcatgggtattgtgctttgtttcttaagttgtcacaagtgtcattgttctgtgattgtcattacatgggctggttcaat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0535300, RefSeq:Os05g0535300