Os05g0535400

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0535400| Description = Choline/ethanolamine kinase family protein| Version = NM_001187573.1 GI:297724276 GeneID:9268113| Length = 3450 bp| ...")
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Gene Name

Os05g0535400

Description

Choline/ethanolamine kinase family protein

Version

NM_001187573.1 GI:297724276 GeneID:9268113

Length

3450 bp

Definition

Oryza sativa Japonica Group Os05g0535400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26645870..26649319

Sequence Coding Region

26645870..26646235,26647819..26647940,26648059..26648254,26648676..26648793,26648903..26648950
,26649029..26649129,26649212..26649319

Expression

GEO Profiles:Os05g0535400

Genome Context

<gbrowseImage1> name=NC_008398:26645870..26649319 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26645870..26649319 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggcgagcgagacgaaccagaaggcggcggcggcggggagcagcatcccggagggggcgcggcagctgctgcacgagctggcggcggggtggggcgacgtggcggactgccgggcgctggaggtggtgccgctcaggggggccatgaccaacgaggtctaccaggcgcggtggccgccggcggcggaggcggaggcggcggggaggagggtgctggtgagggtgtacggcgagggcgtggagttgttcttcgaccgggaggccgaggtgcgcacgttcgagtccatgtcgcggcacggccacggcccgcgcctcctcggtcgcttccccaacggccgcgtcgaggagttcatccacgccaggacactctcagctgttgatctgcgtgatccagagatttcagccattatagcctcaaagctgagggaattccacaaccttgatatgcctggtccaaaatctgtactcatttgggacagactaaggaactggctcaaaactgccaagaatttgtgcccctctgacgaagccaaagagttctgcttggatagcatggagaacgagatcactgcgttggaaaatgagctttcagaggattaccagtgcgtaggattttgccacaacgatctccagtatggaaacatcatgattgatgaagagaccaaattgctgaccatcattgactatgagtatgcaagttttggtccagttgcttatgacattgcaaaccatttctgcgagatggctgcagactaccattcagaaaagcctcacatactggactacactaaatatccagatactgatgagcagaagcaatttgtgcagagctacctgagctcttcaggcgaggaacctgacgcagagaaggtcaataatctgataaaaagtatcgagaagtacaccttggcaagccatctcatttgggccctctggggaataatttcggagcatgtcaacgatattgacttcgactacatggggtatgcgaggcagaggttcgagcagtactggctcaagaagcctgcaatcctaacatgtcaggtcgttgaataa</cdnaseq>

Protein Sequence

<aaseq>MVASETNQKAAAAGSSIPEGARQLLHELAAGWGDVADCRALEVV PLRGAMTNEVYQARWPPAAEAEAAGRRVLVRVYGEGVELFFDREAEVRTFESMSRHGH GPRLLGRFPNGRVEEFIHARTLSAVDLRDPEISAIIASKLREFHNLDMPGPKSVLIWD RLRNWLKTAKNLCPSDEAKEFCLDSMENEITALENELSEDYQCVGFCHNDLQYGNIMI DEETKLLTIIDYEYASFGPVAYDIANHFCEMAADYHSEKPHILDYTKYPDTDEQKQFV QSYLSSSGEEPDAEKVNNLIKSIEKYTLASHLIWALWGIISEHVNDIDFDYMGYARQR FEQYWLKKPAILTCQVVE</aaseq>

Gene Sequence

<dnaseqindica>1..366#1950..2071#2190..2385#2807..2924#3034..3081#3160..3260#3343..3450#atggtggcgagcgagacgaaccagaaggcggcggcggcggggagcagcatcccggagggggcgcggcagctgctgcacgagctggcggcggggtggggcgacgtggcggactgccgggcgctggaggtggtgccgctcaggggggccatgaccaacgaggtctaccaggcgcggtggccgccggcggcggaggcggaggcggcggggaggagggtgctggtgagggtgtacggcgagggcgtggagttgttcttcgaccgggaggccgaggtgcgcacgttcgagtccatgtcgcggcacggccacggcccgcgcctcctcggtcgcttccccaacggccgcgtcgaggagttcatccacgccagggtgagcatttttttttggccttctctgtttttttttcttcttcttctttcttgtctgcttgcgacaaaatttcttgctgctcttgatttcgtacttggaaggtagtgttcttcagttattcgtattgagtttggaactttggatgggtgactggggaatctgacgcataaattttgtttgcgaattcagagcttttttatttttcggcgagaaattcagagttgtttcactgtttgcaatcgttttcagcctgcatcgtgggaatcgtgtagtaggtagcgtcatatgaatattaatcagttgcctttctttgaaaatttcctcttgatgatgtagtagatgtactctgcagttgtactgtcgaaatttcaacattgaccttcagaaacttatccgggatgttcattcaaatccgtactcaatgaagtcatcacccaattttaattgtggcagccattgtttttgttctcttgttgactacactgtgcctgcctaatattatatctaaaaattaaaacaaaaaacttttcttaatagcttccgagagactgagatactctatccgtctcaaaatataaatgattttgaatggattggacacattatagtattacgaatcagaccagagagcctgatgagtattacttttggcagaaagcatataaattacttgtcctagtaacttgtaagcatgggagggtgttgtcattagttgacatttctgtttcttgggccctgaaaagaaagacatttctgcttcttggagatgactaatagctgtactattttgttttgttaggacatatgaaactgttctcttgctgaataaattgtacaacatgaatcattttctttttccttcataacttcttgacggctttagtgatagcttctgagcctggcagaatgctgtcgttagttagcaattatgcttgctgaagatgtcatacagttcagctactatgtttaatgatggttgtctatgaaattgttttatggtttatcatatttaattgcttatagttcaacgatccaaatatccacatgaaagaacaagtgtgtgtattgtataacgtatctaccgttctacctgcttactgaaacgaatctacctcgctgaacacagccgtgaataaaaaaaagagaagacatagttaattttggtgagcacagccataaggaatcaatttggtgtctgaacacctcaatgagcactggtttaatcatgcaagaaatcttttgattagtaagactgatgaccgagttgctaaaggtcacagaacacggcgtctgagcttcagaataaggcatcagcccgattactttattaatataatatatagggggaaaatatggcatggacaaaacaaagtaggatgggaatgttaatcttttttctcaatttgtttcttcactttcaaaagaaagcatcatgttctgtttgtgttgctgggaagaaccgaagaaggacgattcaaaaacacaaagcattacgatatgatgactataaatatgtttatataggatggtgggtccattaatgttcaaaagaacaaaaggactgatgcaaatattcctttcagacactctcagctgttgatctgcgtgatccagagatttcagccattatagcctcaaagctgagggaattccacaaccttgatatgcctggtccaaaatctgtactcatttgggacagactaaggtattacttaatttgtgtttacactgttttttagcattgcatacttgtaaaatgaaacacatcatcgaagtaaaacactaagttactaactgacaatgcctatgcacatcttcatcaggaactggctcaaaactgccaagaatttgtgcccctctgacgaagccaaagagttctgcttggatagcatggagaacgagatcactgcgttggaaaatgagctttcagaggattaccagtgcgtaggattttgccacaacgatctccagtatggaaacatcatgattgatgaagagaccaaattgctgaccatcattgtaagttcttgctccattgtgtatgtttgattcatctgttccattactattttttgggggaacgagcaagagacttggacatctttatattaagaagaaagctcaatttcgtctagagacatcagaccgaccacaaggaaaaaggagagttaaaccatctgctttgttatttcacatcacacacattgatgcgtcttggtactccgtataaccttatcatacattgagttgtatgttactatctccaggaataaagatttcacttctgaaacgacatactttatgaaagattatgcatattttccttattagccttcatgtatgtcatgtctgtttatgaacctgaagttttatatgtagccaggcgaaattaacaaacatatcgtcttgatcttactggttcctcatcatgcctacacaggactatgagtatgcaagttttggtccagttgcttatgacattgcaaaccatttctgcgagatggctgcagactaccattcagaaaagcctcacatactggactacactaaatatccaggtatttcatattagctgtcaaagttattaatttgtacattattgttctcccttttatccattttggtcaccctatattttctctgttcgttcttgcttatctgcaacagatactgatgagcagaagcaatttgtgcagagctacctgagctcttcaggtaagcatgaagtttgtcattaacatctcattctcccttctctattccataaaaacaataaccgaatatccataataggcgaggaacctgacgcagagaaggtcaataatctgataaaaagtatcgagaagtacaccttggcaagccatctcatttgggccctctggggaataatttcggtttggtttctcctcagtttcacttgcctccaactgtgtaagactgaacaccatgtaaacatccaatttacatcttttgcaggagcatgtcaacgatattgacttcgactacatggggtatgcgaggcagaggttcgagcagtactggctcaagaagcctgcaatcctaacatgtcaggtcgttgaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0535400, RefSeq:Os05g0535400