Os05g0535600

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0535600| Description = Similar to Inositol-1, 4, 5-trisphosphate 5-phosphatase-like protein| Version = NM_001062692.2 GI:297604819 GeneID:43...")
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Gene Name

Os05g0535600

Description

Similar to Inositol-1, 4, 5-trisphosphate 5-phosphatase-like protein

Version

NM_001062692.2 GI:297604819 GeneID:4339441

Length

4877 bp

Definition

Oryza sativa Japonica Group Os05g0535600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26657932..26662808

Sequence Coding Region

26657932..26657962,26658025..26658195,26658299..26658441,26658514..26658622,26658873..26658984
,26659335..26660116,26660426..26660530,26660791..26660878,26661485..26661547
,26662167..26662214,26662362..26662548,26662692..26662808

Expression

GEO Profiles:Os05g0535600

Genome Context

<gbrowseImage1> name=NC_008398:26657932..26662808 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26657932..26662808 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcctcttcctcctccgcctcgtcgccgctcctacctcgccgaggccaccagctccaggagccagccatggccgcgtcccagatgcggtgcgggggcaggagggagaaccagaaggggcttgtgcagaggtgcgccgagacgatgatgctgtgctgcggcgtggattgctggtgcggcgcgctgcggctgtggcgcagggtggtgcttcgcaagtggctcaacgtcggctccgggtcgggcgactccgacttcagcgccgacgagtgcgacgccagcgacggcgagctcgacggcgaaggcaatgaggggaatgctgaccagcatactgcaatggaagctctttcttacagggataatgaatcatatggtgaagggacgagtttagatggacttggtgcaggaacaattggggatgaaattaaatctatgccttacaggcttagaagacgcaaatcagagacccttcgcgctcagtatattgacatcagagaactcaggatttgtgtagggacatggaatcttgcaggcaagtttccacccagtgatctggacattcaagactggttggataaggaggagcaggctgatatttatgttcttggatttcaagaaattgttccattaaatgctggaaacatatttggttctgaggataacagtccaattgcagtatgggagcatattattcgtgaaactttgaataagatttgtccagataagccgcagtataaatgtcacagtgatcctccttcaccatcaaggtttaatccatcagattatgttatggtgatgaaagatgaattgcttagcgagtctgacagtgacaattatggtgagcttcatccattgattaaacaaaatgatgatatagctattgacaatgatgtagttcatgataaaacatatgaaaacttcagtgctgcttccaacggaagagttcataaaggcaaagatttcagcaggatggattcagtaaagacttctgatcagtcccccaacttaagttatgaaaaagacagatcaaaactggaagagacaaccaaattactctatcatccagaaaggcttggaatgatttggcctgaacagccattggatatgatggctcagtgtcttcgggctagcacttcactgaaggctctagcaactccagcatctttgaaatcaacagtgaattttccaaatgatgatttatcccatcaagttaacagtgacaatggagtgattaaaagtaaaaggccatgctttctgcgaatagtaagcaagcaaatggtgggaatatatctttcaatatgggttcggagagacttgcggaagcacattcagaatttgagagtatcaactgtcggtgtaggtgcaatgggttatatgggcaacaaggcaaaaaaggatggcgatgaactgaaaagaaatgcagatgttgaagaaatcctccgaagaacagtatttaacccacttcctggacttagcacgcctaagggaatattgggtcatgaaaggatcatatggtttggagatctcaactaccgaatcaacttatcatatgaaagagcacatgaacttatctccaagcaagattgggatggattgtttgagaatgatcagctaaaaagagaattgagtaaaggacacacttttgatggttggatcgaaggagatatcagcttccccccaacatataaatacgagtttgactcagaaaagtatgtaagtgatgagccaaaatctggaaggagaacaccagcatggtgtgataggattctttcacgaggaaagggaatcaggttaatttcctacaggagaggagagcttaagctttctgatcaccgccctgtgactgcagtcttcatggcagatgttgaggttctctgccacagaaagttgcagaaagcattaacatttacggatgcagaggttgagcaagttcttcagctgaaggtcgctgaataa</cdnaseq>

Protein Sequence

<aaseq>MASSSSSASSPLLPRRGHQLQEPAMAASQMRCGGRRENQKGLVQ RCAETMMLCCGVDCWCGALRLWRRVVLRKWLNVGSGSGDSDFSADECDASDGELDGEG NEGNADQHTAMEALSYRDNESYGEGTSLDGLGAGTIGDEIKSMPYRLRRRKSETLRAQ YIDIRELRICVGTWNLAGKFPPSDLDIQDWLDKEEQADIYVLGFQEIVPLNAGNIFGS EDNSPIAVWEHIIRETLNKICPDKPQYKCHSDPPSPSRFNPSDYVMVMKDELLSESDS DNYGELHPLIKQNDDIAIDNDVVHDKTYENFSAASNGRVHKGKDFSRMDSVKTSDQSP NLSYEKDRSKLEETTKLLYHPERLGMIWPEQPLDMMAQCLRASTSLKALATPASLKST VNFPNDDLSHQVNSDNGVIKSKRPCFLRIVSKQMVGIYLSIWVRRDLRKHIQNLRVST VGVGAMGYMGNKAKKDGDELKRNADVEEILRRTVFNPLPGLSTPKGILGHERIIWFGD LNYRINLSYERAHELISKQDWDGLFENDQLKRELSKGHTFDGWIEGDISFPPTYKYEF DSEKYVSDEPKSGRRTPAWCDRILSRGKGIRLISYRRGELKLSDHRPVTAVFMADVEV LCHRKLQKALTFTDAEVEQVLQLKVAE</aaseq>

Gene Sequence

<dnaseqindica>4847..4877#4614..4784#4368..4510#4187..4295#3825..3936#2693..3474#2279..2383#1931..2018#1262..1324#595..642#261..447#1..117#atggcgtcctcttcctcctccgcctcgtcgccgctcctacctcgccgaggccaccagctccaggagccagccatggccgcgtcccagatgcggtgcgggggcaggagggagaaccaggtaccagttcttggccggggtggagttgggttcccttgcatttttgctcgcgttcttggatcaaatcggttattattgctgttcttgttgttgctgctgtctgattctgaaaattctctcgtctgctccgggtggtggtggagaaggggcttgtgcagaggtgcgccgagacgatgatgctgtgctgcggcgtggattgctggtgcggcgcgctgcggctgtggcgcagggtggtgcttcgcaagtggctcaacgtcggctccgggtcgggcgactccgacttcagcgccgacgagtgcgacgccagcgacggcgagctcgacggcgaaggttaacctgcctcaccgagtcaccgtcccctctcctcttccttcctagctgctctgatttgatccagtttactcaagctttgctcttgtctggaggaaaaatggggggagaatttggtgtgcgaatttgtgttgttttgattgctaggcaatgaggggaatgctgaccagcatactgcaatggaagctctttcttgtacgcctttgtgatttgactctccttttttttttcagaagattaaaaaataatcccattcaaagaattggttagtttttttttctttagaactaggagatgtcatgtttaattttgtgtgtaagttgatgatcttgcaattgcaagtgccggcaatttggtatggtcattaatatctctgagaaagacttccattgtgatgtgtagctaggctagtactctctgcataccagcggctttcttttggtatattcaacctttttaaggaaaggaatgttaggtcagggagttcaaggatttggcgaaagcatgataccttttcgattcttttctaagcttgcttgagcaaaatgggtagcaaaaagtgaggataaagcaggcaacttttgcttaactcatagcctcgtttttttcttattgcttcaatgaatggtaatgtgaccatcttatctagttgactttactatctaatgacagctgctccctttgataaaagtcctgtaggtgttgtttttagttaacaacatgtccttatcaattgctcttcttgcacttaacttgcatatgttattgaatcatgcatattctgattgttctctttattatgccatttgtgcagacagggataatgaatcatatggtgaagggacgagtttagatggacttggtgcaggaacaattggtaatttcattattagctcctcatttttttttggagaggtctgctgaagatctgcacattcggttttttgataagtctatttctttctacatgttctatcttttagatgagttgtccctagttgattttcatacaagggaatggtcttgcatattggtgctaaaatactaatctgagcagtaaaggctagtttggttttgtagacagaacatatgagtccattgaccaaagaggaaagaccttatgtttggtaatcatttacatacgagagactgtagcctcgaatttcagtttccctggggtgatgatgcctctagatcggtttatcttaaactgttctacaaaatagtacatcatgcttttcttgtttttattaataaacatttgatgttatcacaatggatgaaacagaattgaatataattagcaagcattcagctttcaatattttttcaagttactctgaagtccatgtttagtacattaagtgcctatttgaaaaggcagggctgattggttgccttatgtgcagcacaagcacttgtttgataaaactgacatggcaggtttgccttatatgctaatgcaatcaactacacaatgtaggggatgaaattaaatctatgccttacaggcttagaagacgcaaatcagagacccttcgcgctcagtatattgacatcagagaactcaggtatagccgtatagaattttctccatctttgcatttttttttcctggtcctagttatgttcttccagttacagtgagtattgttcctatcatcttatgtcactatgtaattaattaatgtgatgtcagccactcatttcaccgtattcctatcacacaaatcatttcaggttaatgctacaattgaacccacttgttaccggctgaaataaataaaatatgatacttttgtatatgtttcaaactgttttctatatgcaggatttgtgtagggacatggaatcttgcaggcaagtttccacccagtgatctggacattcaagactggttggataaggaggagcaggctgatatttatgttcttgggtaaatcactattcacaatttttttccccctattttgtaaggtaaaagatttgtgccgcagattcgcatgaagcactccacttcttatctttgaaaactaaaaaaatgtttctggatcatgatttgaaattattttggcatcacagtttcttcaaaagagacagacattattttattatttagctatggtatggtggtggttctatttgtattcgtgtatgtcatgatgttggttggttgttctgttgtcagcactacaactgaagtatataaaaaatccattgtcataaatttatgtttatctttcagatttcaagaaattgttccattaaatgctggaaacatatttggttctgaggataacagtccaattgcagtatgggagcatattattcgtgaaactttgaataagatttgtccagataagccgcagtataaatgtcacagtgatcctccttcaccatcaaggtttaatccatcagattatgttatggtgatgaaagatgaattgcttagcgagtctgacagtgacaattatggtgagcttcatccattgattaaacaaaatgatgatatagctattgacaatgatgtagttcatgataaaacatatgaaaacttcagtgctgcttccaacggaagagttcataaaggcaaagatttcagcaggatggattcagtaaagacttctgatcagtcccccaacttaagttatgaaaaagacagatcaaaactggaagagacaaccaaattactctatcatccagaaaggcttggaatgatttggcctgaacagccattggatatgatggctcagtgtcttcgggctagcacttcactgaaggctctagcaactccagcatctttgaaatcaacagtgaattttccaaatgatgatttatcccatcaagttaacagtgacaatggagtgattaaaagtaaaaggccatgctttctgcgaatagtaagcaagcaaatggtgggaatatatctttcaatatgggttcggagagacttgcggaagcacattcagaatttgagagtatcaactgtcggtgtaggtgcaatgggttatatgggcaacaaggcaagtatcaactttaatccactgctcttattattcaattcaacagcactcaaaacattcgcaaatcatttagtcaagaagtcccataggttaatcagtttggtgttggtttgtacttccttctatctgctctatatgttagcataaaaatttagtttcatctactttgttattctacaaatcattggcttgacgatgcttcttcatgctgcaccttttcttttttcaaaatttagaaaataattggtgcaccgtgcacatgtgcttcttgaatgttccaggggtcaatatcagtcagcatgtctatacatcagacacatttttgctttgtatgttgccacctaacttctggagaaaaggatggcgatgaactgaaaagaaatgcagatgttgaagaaatcctccgaagaacagtatttaacccacttcctggacttagcacgcctaagggaatattgggtcatgagtaagttcacaaacttgtttttattttttttgaccaagggctgagcgcccccatttccattacaagttcacaaacttgtgtcttatgaaaaccttttactatcctcgagaggcttgcacccaaccagaatttattcttctatggtttcatctactgtttgtcgctggacactactcatgataatgccttgcttacgatataaccatcttttcccttgatttcttatggttatccatgtcatcattttcagaaggatcatatggtttggagatctcaactaccgaatcaacttatcatatgaaagagcacatgaacttatctccaagcaagattgggatggattgtttgagaatgatcaggtaatttgatggtgtgatacattcattaccattatagatttctgaatcatgcttttcctccctttgtaacagctaaaaagagaattgagtaaaggacacacttttgatggttggatcgaaggagatatcagcttccccccaacatataaatacgagtttgactcagaaaagtatgtaagtgatgagccaaaatctggaaggagaacaccagcatggtatgttagtttttcatagcactgccttctttttttttgcataattaaccttaaaagattaactcaagttcatgcttagaaatcatatctgttgcctgttcaggtgtgataggattctttcacgaggaaagggaatcaggttaatttcctacaggagaggagagcttaagctttctgatcaccgccctgtgactgcagtcttcatggcagatgttgaggttctctgccacagaaagttgcagaaagcattaacatttacggatgcagaggttgagtatcatctggtaacggaagaagatagaacttgagtgaaaatatatatatttgattgtgcaggcaagttcttcagctgaaggtcgctgaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0535600, RefSeq:Os05g0535600