Os05g0537300

From RiceWiki
Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0537300| Description = Similar to Unconventional myosin heavy chain| Version = NM_001062703.1 GI:115465136 GeneID:4339453| Length = 3155 bp...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0537300

Description

Similar to Unconventional myosin heavy chain

Version

NM_001062703.1 GI:115465136 GeneID:4339453

Length

3155 bp

Definition

Oryza sativa Japonica Group Os05g0537300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26763107..26766261

Sequence Coding Region

26764219..26764581,26764671..26764811,26764903..26764973,26765048..26765147,26765220..26765276
,26765384..26765440,26765529..26765609,26765709..26765791,26765876..26766002

Expression

GEO Profiles:Os05g0537300

Genome Context

<gbrowseImage1> name=NC_008398:26763107..26766261 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26763107..26766261 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cattcctcttacttcaaggctcaacatgatacgagaagcctggcctattggttatccaacctgtcaacattgtcagttctcctgcaactctcatttaaaaccaccagggcagcaatctcaaccccacatagacggagattttcctacgagaggatttttcaagctagtcaaacttcaaatagcggacttgcttatttcagtgctcaaccggtggatgggcctagtggattgcaacaaattgatgcaaaatatccagctttgctcttcaagcagcagcttgtggatctgattgagaaggtgtatggaatgataagtgacaaggtgaagaaggagcttaacccgttacttgagttgtgcatacaggatccaaggacttctcactcaaatcaagcaaaggcctcactatcatctgctagtcacttgggccaacaaagccaactcacacactggttgggcatagtgaaaatcctcaacaactgcttgcatctgctaagagcaaatcatgtcccatcaattctgatccacaagttgcttacccaaatattttctatggtcaatgttcaactatttaatagacttctgttgcgccgtgaatgttgttcgttcagcaacggggagtatatcagagctggactaactcaaataaaacattggtgcaatgatgttaatcaagagtttgcagattcagcctgggaagcactgaggcatataagacaagctgttgatttcttggtaatttcgctgaagccaatacggacatggagtgaaatatgcgatgatgtttgcccagctctcagcttacagcagcttgagcgtatagttggcatgtactgggatgatatgaatggcacaaacattatttcagcagagttcacatcaagcatgagaactatgatgaaggaggaatcaaataatgccaccagcttttctgtcctgttggatgacgattccagcatacctttttcacttgaagacattgcgaagtcgatgccaaccattgaggagacgacagagaatgacctgctaccttttgtccgtgaaaaccaaagctttgcgtttatattgcacaggagagattga</cdnaseq>

Protein Sequence

<aaseq>HSSYFKAQHDTRSLAYWLSNLSTLSVLLQLSFKTTRAAISTPHR RRFSYERIFQASQTSNSGLAYFSAQPVDGPSGLQQIDAKYPALLFKQQLVDLIEKVYG MISDKVKKELNPLLELCIQDPRTSHSNQAKASLSSASHLGQQSQLTHWLGIVKILNNC LHLLRANHVPSILIHKLLTQIFSMVNVQLFNRLLLRRECCSFSNGEYIRAGLTQIKHW CNDVNQEFADSAWEALRHIRQAVDFLVISLKPIRTWSEICDDVCPALSLQQLERIVGM YWDDMNGTNIISAEFTSSMRTMMKEESNNATSFSVLLDDDSSIPFSLEDIAKSMPTIE ETTENDLLPFVRENQSFAFILHRRD</aaseq>

Gene Sequence

<dnaseqindica>1113..1475#1565..1705#1797..1867#1942..2041#2114..2170#2278..2334#2423..2503#2603..2685#2770..2896#taataagacgaaatgatgacctcctcagtaggaatgatgacttgatcaagaaaattgaagattccggtcaagttgttgctgagctccaggcagccttagaaaggtaaccaccataagttttttttaatcctcaacgattcatttttagccacattctacatttctttgtcatcgtctttttatggaacaagtgcctctgttattcaaccttccacatacacaggatagaagggaaagcggccaacttagaggcagaaaatcaaattcttcgccaacaagcaattgcaacccccccatctacagccaagtctcaagctgcattctctaaaatcagtatgatccatgtaatgtgtcttcaatagatcttacagttgtatgactgttgaatattctcacttgaattggtagatgcatttcaacagagaagtccagaaaatggacatattttaaatggcaacgtagcatatgctgaaaagtccttgactggtccagcagaaacaagaccctctatggttgttaaccaagtatgtggtcgcatgtcaaaaccgtcctttctgtttggtgataaattagtccatatgttgcaactgatttaaataatgcattaacgcagggtagcatcctcaatttgattaaccaaaaggattatgaaagtggagataaaatgcaaagagcacataatgaagtatatcaggtaggctggtttctatgttctgtagttgcctgacctccaactgctgaaatggtacctttgtttgttttggtattcttctcagcaccagcagccccaggatgatcagcagttattgcttcagtacattacccagcaccttggattctctggtagtaaacctgtcgctgcgcttcttctataccaatgccttcttcattggaaatcgtttgaaacagcaaaaacaagtgtctttgacagtatcctacaagagataaactcagcaatagaggtttgtggctcatttctttgaatatttaaaccttcttgttctgtagctgtactctagtagcacatatcctgcaccttgtaacatgatacgagacatctttatgcagccacctggaatccagaatcattacattgttataatattaactgacattcctcttacttcaaggctcaacatgatacgagaagcctggcctattggttatccaacctgtcaacattgtcagttctcctgcaactctcatttaaaaccaccagggcagcaatctcaaccccacatagacggagattttcctacgagaggatttttcaagctagtcaaacttcaaatagcggacttgcttatttcagtgctcaaccggtggatgggcctagtggattgcaacaaattgatgcaaaatatccagctttgctcttcaagcagcagcttgtggatctgattgagaaggtgtatggaatgataagtgacaaggtgaagaaggagcttaacccgttacttgagttgtgcatacaggtacttcctctcctaagagaactagaaaagtagccatcagttctgaaacattttctttctgaaaatctgtaaatattgtaaatattcaggatccaaggacttctcactcaaatcaagcaaaggcctcactatcatctgctagtcacttgggccaacaaagccaactcacacactggttgggcatagtgaaaatcctcaacaactgcttgcatctgctaagagcaaatcatgtacgtgataaacgaatacaaatgccaatgattatccactcccagtgtatgacttaccagatcaactgtcctttctatgttaaatttgcaggtcccatcaattctgatccacaagttgcttacccaaatattttctatggtcaatgttcaactatttaataggtgagcttattttctctcctatagcattttttgagagacttagttattatttttttcccctgttttggaagcagacttctgttgcgccgtgaatgttgttcgttcagcaacggggagtatatcagagctggactaactcaaataaaacattggtgcaatgatgttaatcaagaggttgttcggatatgtctgtagattttttttttttcaaaatgctgccagcttaagtttttagtgtttacacagtttgcagattcagcctgggaagcactgaggcatataagacaagctgttgatttcttggtgcgtgtgtttttctttcattatgaaaagagagatgaaaaaagattggcatgtgaacaaattgaaacttagttttccaaaatatttcctaccttgtcattcaccaggtaatttcgctgaagccaatacggacatggagtgaaatatgcgatgatgtttgcccagtaagtattatatatttttctggttatttagagaacctttgtgctattcattaggtctacatgtgtaatcatttcaacgcctgttcaggctctcagcttacagcagcttgagcgtatagttggcatgtactgggatgatatgaatggcacaaacattatttcagcagaggtgagatgatatgttttcttatttaatcgtacaattaagtcctgcattatttggcctgctattccttttgaaatgctaatcatgtgacttgtgatttagttcacatcaagcatgagaactatgatgaaggaggaatcaaataatgccaccagcttttctgtcctgttggatgacgattccaggttttctactatgctaaaaagtttccatggccattctccattccctttcagtgctcatttaacttctgttgattatctttgcagcatacctttttcacttgaagacattgcgaagtcgatgccaaccattgaggagacgacagagaatgacctgctaccttttgtccgtgaaaaccaaagctttgcgtttatattgcacaggagagattgagtggttccctcttcacagatcattcaccggctatgtgaaaaaggagcgcctctgtgtagcgtggatattacacgttattcatgttgtagactagtaacccatttaggaatcaagagcaattgcagctgagggtttctaggcctctctggtttgaatggttggttaagcaaactgtacatgttttatctgcagtgtgtataacacacgttattcatgttgtagactagtgacccatttatgaattaagagcaattggacc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0537300, RefSeq:Os05g0537300