Os05g0537400

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0537400| Description = Similar to Protein phosphatase 2C| Version = NM_001062704.2 GI:297604825 GeneID:4339454| Length = 2353 bp| Definiti...")
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Gene Name

Os05g0537400

Description

Similar to Protein phosphatase 2C

Version

NM_001062704.2 GI:297604825 GeneID:4339454

Length

2353 bp

Definition

Oryza sativa Japonica Group Os05g0537400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26766712..26769064

Sequence Coding Region

26766712..26767052,26768044..26768149,26768240..26768584,26768693..26769064

Expression

GEO Profiles:Os05g0537400

Genome Context

<gbrowseImage1> name=NC_008398:26766712..26769064 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26766712..26769064 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggcggcggcggcgatatgtggggaggatgagacggcggcgcgggtggggtgcacgggggaatgggcgggcgggatcgagagggtggatcttggggagaggaaggaggcggtggcggcggcgggggcggggaagaggagcgtctacctgatggactgcgcgccggtgtggggctgcgcgtcgacgcgcggccgcagcgcggagatggaggacgcgagcgccgccgtgccgcggttcgcggacgtgccggtgcggctgctcgccagccggcgcgacctcgacgcgctgggcctcgacgccgacgcgctccgcctgccggcgcacctcttcggcgtgttcgacggccacggcggcgccgaggtggcgaactactgccgtgaaaggatccacgtcgtcttgagcgaggagctgaagcgacttggcaagaatttgggggagatgggcgaggtggacatgaaagagcactgggatgatgtgttcacgaaatgtttccagagagtggacgatgaggtttcagggagagtgaccagggttgtcaatggtggcggtgaggtccggtcagaaccggtgaccgcagagaacgtcggctcgacggcggtcgttgcgcttgtctgctcatctcatgtggtggttgccaactgtggagattcgcgcatcgtgctctgccgcgggaaggagcccgtagccttgtcaattgatcacaagcctgacaggaaggatgagcgggcaaggattgaagcccagggaggcaaggtcatccaatggaatggttaccgggtgtccggtatacttgctatgtcccgatcaatcggtgatcgctatctgaaaccatttgtcattccaaaaccggaagttatggtcgttccacgggcgaaggatgatgactgtcttattctagcaagcgatgggctgtgggatgttgtgtcaaatgaagaggcatgcaaagtcgcacgccgacagatccttctgtggcacaagaacaatggcgctgcatcaccattgtctgatgagggtgaaggatccaccgaccctgctgcccaagcagctgccgattatctgatgagactcgctctgaagaaaggcagcgaggataacatcactgtcattgttgtcgacttgaaaccgcgaaagaaactcaagaacatttcataa</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAAAICGEDETAARVGCTGEWAGGIERVDLGERKEAVAA AGAGKRSVYLMDCAPVWGCASTRGRSAEMEDASAAVPRFADVPVRLLASRRDLDALGL DADALRLPAHLFGVFDGHGGAEVANYCRERIHVVLSEELKRLGKNLGEMGEVDMKEHW DDVFTKCFQRVDDEVSGRVTRVVNGGGEVRSEPVTAENVGSTAVVALVCSSHVVVANC GDSRIVLCRGKEPVALSIDHKPDRKDERARIEAQGGKVIQWNGYRVSGILAMSRSIGD RYLKPFVIPKPEVMVVPRAKDDDCLILASDGLWDVVSNEEACKVARRQILLWHKNNGA ASPLSDEGEGSTDPAAQAAADYLMRLALKKGSEDNITVIVVDLKPRKKLKNIS</aaseq>

Gene Sequence

<dnaseqindica>2013..2353#916..1021#481..825#1..372#atggcggcggcggcggcggcggcggcgatatgtggggaggatgagacggcggcgcgggtggggtgcacgggggaatgggcgggcgggatcgagagggtggatcttggggagaggaaggaggcggtggcggcggcgggggcggggaagaggagcgtctacctgatggactgcgcgccggtgtggggctgcgcgtcgacgcgcggccgcagcgcggagatggaggacgcgagcgccgccgtgccgcggttcgcggacgtgccggtgcggctgctcgccagccggcgcgacctcgacgcgctgggcctcgacgccgacgcgctccgcctgccggcgcacctcttcggcgtgttcgacggccacggcggcgccgaggtatacgcgtgtgcttgagaaccatccgcggcgtccggattggtcgcccacggcgcagcctaagctcacgattttgaccgattccgtggccctcgtgttgctgtgcaggtggcgaactactgccgtgaaaggatccacgtcgtcttgagcgaggagctgaagcgacttggcaagaatttgggggagatgggcgaggtggacatgaaagagcactgggatgatgtgttcacgaaatgtttccagagagtggacgatgaggtttcagggagagtgaccagggttgtcaatggtggcggtgaggtccggtcagaaccggtgaccgcagagaacgtcggctcgacggcggtcgttgcgcttgtctgctcatctcatgtggtggttgccaactgtggagattcgcgcatcgtgctctgccgcgggaaggagcccgtagccttgtcaattgatcacaaggtaaactggggaagctttgttatgcctgtaaaggtcatggtccatttttggggataattaatctgaatccgattatgcctttgttttcagcctgacaggaaggatgagcgggcaaggattgaagcccagggaggcaaggtcatccaatggaatggttaccgggtgtccggtatacttgctatgtcccgatcaatcggtatgcatattgatccctgtgctagatctaggctgaagcacttgtctgtctcttttccctgtaaatgagttgtgtgacactgccatagtaaggactgtgctttgggcctggaaattgtggccatggcaagaacaaagcacatgaaactatgcgacatgatgtaaaaaattacatgatcttacattgattttggcctattgccaccttgttttgagatcttctgcatcatagtgctgtagaattaattgttgccatatattatatgatgatgttaacactatgttagtgcaagtccccaagtcctttgccattgcttgtagttttcggcactaagaaaagtatatcaatagtggattatttcagattggctaggcaaaatgtcctgttaccgtattgcccaaagaactattacgctagatcttatttttagtgatgaatatattacgtgctgtgagatatttccatggtgttgtattattcattaggaatatatttacctacaagtaacagcagtttgggccctaaaatcttgtttctatgcgagacatacatatgtgaagattctgcaatcatgtgactatctggatattgccagtttggcactaatcttgttgatgaacttgcgatgaggttaaacatatctctgttatagaattgagtatgcagatttgattaggaaaagaagttacctgccaaagtagaaaagccatcgtttatcgaagcaacaaaggtaccttatgtcatgttcatgcaagtggcacttgcagcttggaccatgactaaatgggtcttagttggacctgttcacatctcttgcgccattcaaataaactaactctattgtgttatacacttggacaacattgttgctccatttcacctgaaatttggttgaaccaatgacagttcagctgacttccctgtgcattggattgcatgtccaaatttagtgccccttgtgctaattttatccgtgttcctgatgttgcaggtgatcgctatctgaaaccatttgtcattccaaaaccggaagttatggtcgttccacgggcgaaggatgatgactgtcttattctagcaagcgatgggctgtgggatgttgtgtcaaatgaagaggcatgcaaagtcgcacgccgacagatccttctgtggcacaagaacaatggcgctgcatcaccattgtctgatgagggtgaaggatccaccgaccctgctgcccaagcagctgccgattatctgatgagactcgctctgaagaaaggcagcgaggataacatcactgtcattgttgtcgacttgaaaccgcgaaagaaactcaagaacatttcataa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0537400, RefSeq:Os05g0537400