Os05g0538900

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0538900| Description = Conserved hypothetical protein| Version = NM_001062706.1 GI:115465142 GeneID:4339456| Length = 2859 bp| Definition ...")
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Gene Name

Os05g0538900

Description

Conserved hypothetical protein

Version

NM_001062706.1 GI:115465142 GeneID:4339456

Length

2859 bp

Definition

Oryza sativa Japonica Group Os05g0538900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26823251..26826109

Sequence Coding Region

26823251..26823314,26823681..26823747,26823834..26823905,26825092..26825143,26825284..26825336
,26825510..26825569,26825752..26826109

Expression

GEO Profiles:Os05g0538900

Genome Context

<gbrowseImage1> name=NC_008398:26823251..26826109 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26823251..26826109 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccgaatctcgagaggctgcatgggagatggccagatggccagttagtatggtgggcccacttgtcagcacggaagcctccagccctccctctccgactcccattctcccgtcccccaaattcgcatctctaccctcgccgacggcggccaagcaccaccgccgtcgtcctccgccacctcgccgtcctctaccacgacgagccggtgtccgccgttgccctcctcgagttcgaccccgttcatctcatccgtcgtcctccgcgagataactctccatcgctgaatcgggcgatgtcgaagcagctggtgtcgcggctgctggggatgttccgctcgcggacgcaggtgccagtggaggagaaacggtgggtggagttcaaggggagcgaccaggatcagaccactgttcaagttgagtggatttgctggttgaatggacaaaggaagaaagctccgacgccagaggagttggctgagctggaagcgaggcgtgaacgtgtcaagcaaaatattgaatggaagtttgaatctccaaatctcaaaagttctattccggagtttcctgatacttcgctagatcagagaaaaggacatgatgaggtatctagatcaaaggatggaagtgatacagaggatgccaccgtagatactgacaggtcttctgaaccgacaggaactggtgctaccttcaaaccggggacatggcagccaccaacatga</cdnaseq>

Protein Sequence

<aaseq>MDPNLERLHGRWPDGQLVWWAHLSARKPPALPLRLPFSRPPNSH LYPRRRRPSTTAVVLRHLAVLYHDEPVSAVALLEFDPVHLIRRPPRDNSPSLNRAMSK QLVSRLLGMFRSRTQVPVEEKRWVEFKGSDQDQTTVQVEWICWLNGQRKKAPTPEELA ELEARRERVKQNIEWKFESPNLKSSIPEFPDTSLDQRKGHDEVSRSKDGSDTEDATVD TDRSSEPTGTGATFKPGTWQPPT</aaseq>

Gene Sequence

<dnaseqindica>2796..2859#2363..2429#2205..2276#967..1018#774..826#541..600#1..358#atggatccgaatctcgagaggctgcatgggagatggccagatggccagttagtatggtgggcccacttgtcagcacggaagcctccagccctccctctccgactcccattctcccgtcccccaaattcgcatctctaccctcgccgacggcggccaagcaccaccgccgtcgtcctccgccacctcgccgtcctctaccacgacgagccggtgtccgccgttgccctcctcgagttcgaccccgttcatctcatccgtcgtcctccgcgagataactctccatcgctgaatcgggcgatgtcgaagcagctggtgtcgcggctgctggggatgttccgctcgcggacgcaggtgccaggtgggcgccgacaagttcggcaaccgctacttcacccgcgtcgaggaggtcgacggcgtcagtacgtctccctccccgcccccatcccctccttcaatccactctcgtaggctacatcaatggcggctcatttcttggtttggtgtgtgtggttgctttttctcgatggcttttttgaccagtggaggagaaacggtgggtggagttcaaggggagcgaccaggatcagaccactgttcaaggttacctctcagtcgatgaacttcaacttctagcttgtgtagagaacctgatatgattactgactttgcactttgtttctgcaggcatgtgtggtttgtgaacctttgattctgatttccgaagtatgaatcgacgtgcttggatttttctgatagttgtgtcacacttgtagttgagtggatttgctggttgaatggacaaaggaagaaagctccgacgccagaggtgagattatggccatgctccacacatgattttctgcaaatattttgagcaggctattgatgtacagcatgtctccatttatactatgtaggtgacattttgatttcatctgattgtgatgtatcactgcactattgtaggagttggctgagctggaagcgaggcgtgaacgtgtcaagcaaaatattgaatgtatgcataacatgattacagattatatcctctctaattcttttctccttaaccctacattaataataagaaggtgttctttacttttcttgttaagcctacattaagcagcgcacaagttttcttttgctgatgttgcggtggtggttactggttggcttgttttacatatgttgctgatttatgttgtgggataattgtaatgtttgggctcaagaataattcataacatttgtgtaatgcatattgtttgtttggtgactatacatgaattactgttacttaccgtgttttagaaaaaccaacttaaatgcatccagccatgcatcttgggattgatggcaaaatgctttattgccttaactttcagtttatcttttaaaaaaaagttactacagtatgtttactcatgtgtagcattataggatacctattggttctgttaagcttacgttcggaaatgactatgctacatgcaacttccatttaaaaaacaatgaaactacaccatgtaattttgtcctacttcccaccgatctcacttgtagaattattactggttagtgggaaaatgtaaattacatacatatgcgccataatcattctgttattgtgttcttgaatgttcatggattttgctccactaatattttaatctgtttcaatccagtactcaaaaaagaaagaagaagaggaaaagaagaccggtgtccgaccagtcaagacggttggtatgttctttctggatctgcttaagagttgggaaaacttgacaatttgcaactccttatagtggcacttgatcatttgtgggactggcaacaatcaaacccctgttcttacttcccctcattgtttatctgcaattttagctttctttggactttatgcatttcaagttctttgtgttcaaggcttaactgatgttacatatctatcatgtcccatgaacaccaaccaatgtgtttctgtttgcaattcctactttctaacttcaccaacagttaaaacattggaaatagaaaaacaatattggcatcattcttttgtctctgctccttagcaactacagattcttaactgttgcttttgtcactttatagtatgtatgtattttcatttatttttcctgggggttcgcccttttctcttgatggtttgaataacgatattcctccaaatatagggaagtttgaatctccaaatctcaaaagttctattccggagtttcctgatacttcgctagatcagagaaaaggtatataatcttatactcctgttccatttctgcatgtgatacaactccttcaacatccatgataacatttcaatctcactgtttaggacatgatgaggtatctagatcaaaggatggaagtgatacagaggatgccaccgtagatactgacaggtgctttccagttctccaaaatatataccgtttgctcttgaactaaattctttttggagggtattgtgacttacttccccatttagcattgctttgcggtcttcttatgtgaacatgataattgttcttgcaagtaaaaaaaaacgaatccaccttgttcttgcaagtaaaatataatgaatccaccaaattagcattactgtatgccatcatggatctgccaatgtcttacagatatcatttcagtgttgcagaatatagaaggcatgctccttttgacaacagcaactgtagttaatctggagctaagactgaaggaacaatttgattattattaaggctattctcgtgtttgtgttctttcaggtcttctgaaccgacaggaactggtgctaccttcaaaccggggacatggcagccaccaacatga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0538900, RefSeq:Os05g0538900