Os05g0539300

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0539300| Description = Protein of unknown function DUF295 family protein| Version = NM_001187575.1 GI:297724280 GeneID:9270344| Length = 11...")
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Gene Name

Os05g0539300

Description

Protein of unknown function DUF295 family protein

Version

NM_001187575.1 GI:297724280 GeneID:9270344

Length

1170 bp

Definition

Oryza sativa Japonica Group Os05g0539300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26853473..26854642

Sequence Coding Region

26853473..26854642

Expression

GEO Profiles:Os05g0539300

Genome Context

<gbrowseImage1> name=NC_008398:26853473..26854642 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26853473..26854642 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggccgcgcctgccactcctggcgcgtggcgctcgcgaagctcgagccaccggcgccgtctccgccgctcccgtggctcctcctcccgagagccgacgggccgcctaccttctcctgtgtcctcagcggctgccgctcccaccgcttcttcatcccgcccggcgcggtgcaacgcgcgcgctacttcggctcgtacgacggcggatggctcttcctcgccatcggcggccaaggccaagctcagcgccaccttctcctcaggcacaaccccttccggctcctcgtcctccccaacgtgacccacttccccgacatggtgtacccgccggtactgggagtggtgaaacgggaccatcagatcagcatcgtcgccgccaccctctcgtgcaagccaaccgaggaaggatgcatcgtcgccggaatcatcgatttcgctcactcccccggccgcgccgtgcggcagatcgcgttgtggcgcatgggcgatcaggtggtcttgccgccgtactgggagcaggtgccgaaccagccgatgattgaagcagtaccggtggacctcatacaccacgatggagccttccatttcctcatccgattggagcacatcatcgtgtgtgaagaacccccggagttccaagaagaagccgtgcatctggtcccggtttacatgtacttccagccgcgcggcggcgacaacggcgacgagacggtccttgctcgctacctcgtggagtctcgcaagaagctgctcatggtcgtcaggtattccagtgggcgtcagcacttgccgacgtcggcgttccgggtgttccagatgaagaagttcaacaatggcgaagaagacgagccgctcaacaatggcgggtttcagtactactggagcgagctggacaagctcgaaggccggatgctgttcgtcggacgaggctgctccagatcctacgaggcgggtgacagctaccccgcgggcatggagggcgtctacttcctggatgaccggagcttcgccgaggcggccatggctttcggtgaaggtgcaaacaagctgccgtaccgctgcagcgacaacggcaaatggtcgggagcaccagctgattcccgggtcgatcgctgcttcccgtcgcgaggcccgtcgatctactcacctccggtttggcttctcccttga</cdnaseq>

Protein Sequence

<aaseq>MGRACHSWRVALAKLEPPAPSPPLPWLLLPRADGPPTFSCVLSG CRSHRFFIPPGAVQRARYFGSYDGGWLFLAIGGQGQAQRHLLLRHNPFRLLVLPNVTH FPDMVYPPVLGVVKRDHQISIVAATLSCKPTEEGCIVAGIIDFAHSPGRAVRQIALWR MGDQVVLPPYWEQVPNQPMIEAVPVDLIHHDGAFHFLIRLEHIIVCEEPPEFQEEAVH LVPVYMYFQPRGGDNGDETVLARYLVESRKKLLMVVRYSSGRQHLPTSAFRVFQMKKF NNGEEDEPLNNGGFQYYWSELDKLEGRMLFVGRGCSRSYEAGDSYPAGMEGVYFLDDR SFAEAAMAFGEGANKLPYRCSDNGKWSGAPADSRVDRCFPSRGPSIYSPPVWLLP</aaseq>

Gene Sequence

<dnaseqindica>1..1170#atgggccgcgcctgccactcctggcgcgtggcgctcgcgaagctcgagccaccggcgccgtctccgccgctcccgtggctcctcctcccgagagccgacgggccgcctaccttctcctgtgtcctcagcggctgccgctcccaccgcttcttcatcccgcccggcgcggtgcaacgcgcgcgctacttcggctcgtacgacggcggatggctcttcctcgccatcggcggccaaggccaagctcagcgccaccttctcctcaggcacaaccccttccggctcctcgtcctccccaacgtgacccacttccccgacatggtgtacccgccggtactgggagtggtgaaacgggaccatcagatcagcatcgtcgccgccaccctctcgtgcaagccaaccgaggaaggatgcatcgtcgccggaatcatcgatttcgctcactcccccggccgcgccgtgcggcagatcgcgttgtggcgcatgggcgatcaggtggtcttgccgccgtactgggagcaggtgccgaaccagccgatgattgaagcagtaccggtggacctcatacaccacgatggagccttccatttcctcatccgattggagcacatcatcgtgtgtgaagaacccccggagttccaagaagaagccgtgcatctggtcccggtttacatgtacttccagccgcgcggcggcgacaacggcgacgagacggtccttgctcgctacctcgtggagtctcgcaagaagctgctcatggtcgtcaggtattccagtgggcgtcagcacttgccgacgtcggcgttccgggtgttccagatgaagaagttcaacaatggcgaagaagacgagccgctcaacaatggcgggtttcagtactactggagcgagctggacaagctcgaaggccggatgctgttcgtcggacgaggctgctccagatcctacgaggcgggtgacagctaccccgcgggcatggagggcgtctacttcctggatgaccggagcttcgccgaggcggccatggctttcggtgaaggtgcaaacaagctgccgtaccgctgcagcgacaacggcaaatggtcgggagcaccagctgattcccgggtcgatcgctgcttcccgtcgcgaggcccgtcgatctactcacctccggtttggcttctcccttga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0539300, RefSeq:Os05g0539300