Os09g0555800

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0555800| Description = Similar to AMP-binding protein (Adenosine monophosphate binding protein 6 AMPBP6)| Version = NM_001070430.1 GI:115480...")
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Gene Name

Os09g0555800

Description

Similar to AMP-binding protein (Adenosine monophosphate binding protein 6 AMPBP6)

Version

NM_001070430.1 GI:115480602 GeneID:4347816

Length

1997 bp

Definition

Oryza sativa Japonica Group Os09g0555800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22914543..22916539

Sequence Coding Region

22914543..22916078,22916342..22916539

Expression

GEO Profiles:Os09g0555800

Genome Context

<gbrowseImage1> name=NC_008402:22914543..22916539 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22914543..22916539 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatagcctgccaaagagagacgctaactacgtccctttgagccccatcaccttcctccacagagccgcctccgtctacgccgaccgcacctccgtcgtgtacggcgccaccagcttcacgtggcgccagacgcaccaccgctgcctccgcctcgccgccgcgctccagtccctcgccgtctcaaagaacgacgtcgtgtccgtcatcgcgcccaacacgccggcgctgtacgagatgcacttcgccgtgccgatggccggagcggtgctgaacgccatcaacacccgcctcgacgcggccaacgtcgccgccatcgtcaggcacgccgagcccaaggtgctcttcgtcgactaccagttcatccgcgtcgccaccgacgcgctcaaggccgtcatgggcgacggcgacggcgacggcggcgaggtcagggcgcccttgccgctgctcgtcgtcatcgacgacgccgacaagccgacgggcgcccgcgtcggcgagctcgagtacgagcagctggtggcgcggggagacccggcgaggtacccgcctcggccggtggaggacgagtgggacgccgtcgcgctcaactacacctccggcacgacgtcggcgcccaagggcgtcgtgtacagccaccgcggcgcgtacctcaacaccatgggccttcttctccagtggggcgtcggccacgagccggtctacctgtggtcgctcccgatgttccactgcaacggctggaccttcacctggggcgtggcggcgcgcggcggcacgaacgtctgcatccgcgcgccgaccgccgacgccatgtacgcggcgttcgccgcgcacggcgtcacccacatgtgcgccgcgccggtgctcttcaacatcctcctcgacggcgcgtgccgggagccgctgcgccgccccgtggaggtgctcaccggcggcgcgccgccgcccgcggcgctgctcgagcgcgtcgagcggctcggcttccacgtcacgcacgcctacggcatgacggaggccaccggcgtggtgatggtgtgcgagtggcgggagcagtgggacgccctgccaccgtcggagcgcgcgcggctcaaggcgcggcagggcgtgagcgcgctcaccctcgccgacgccgacgtgaaggacctcaagacgatggagagcgtgccccgcgacggcgccaccatgggcgaggtcgtgctccgcggcagcaacgtcatgaagggatacttcaagaacccgcgcgccacggcggacgcgttccgggacgggtggttcctcaccggcgacgtgggcgtcgtccacccggacgggtacgtggagatcaaggaccggtccaaggacgtgatcatctccggcggcgagaacatcagcagcgtggaggtggaggcggcgctgtaccagcacccggcggtgcgggaggcggcggtggtggccatgccgcacccgcactggggcgagacgccgtgcgcgttcgtggcgctgaagcgggagttcgccggcgccggcgaggtgagcgagcaggaggtggtgtccttctgccggaacaggatggcgcactacatggtgccgaggaaggtggtgttcgtcgacgagctccccaagaactccacggggaaggtgcagaagctcgcgctgcgcgacatggcgcgccgcctccgcctcagggcgcccgacaaggcgaggcccgtcgctgcccctgcccgccatgggccgttgactcaaactgctaggctttga</cdnaseq>

Protein Sequence

<aaseq>MDSLPKRDANYVPLSPITFLHRAASVYADRTSVVYGATSFTWRQ THHRCLRLAAALQSLAVSKNDVVSVIAPNTPALYEMHFAVPMAGAVLNAINTRLDAAN VAAIVRHAEPKVLFVDYQFIRVATDALKAVMGDGDGDGGEVRAPLPLLVVIDDADKPT GARVGELEYEQLVARGDPARYPPRPVEDEWDAVALNYTSGTTSAPKGVVYSHRGAYLN TMGLLLQWGVGHEPVYLWSLPMFHCNGWTFTWGVAARGGTNVCIRAPTADAMYAAFAA HGVTHMCAAPVLFNILLDGACREPLRRPVEVLTGGAPPPAALLERVERLGFHVTHAYG MTEATGVVMVCEWREQWDALPPSERARLKARQGVSALTLADADVKDLKTMESVPRDGA TMGEVVLRGSNVMKGYFKNPRATADAFRDGWFLTGDVGVVHPDGYVEIKDRSKDVIIS GGENISSVEVEAALYQHPAVREAAVVAMPHPHWGETPCAFVALKREFAGAGEVSEQEV VSFCRNRMAHYMVPRKVVFVDELPKNSTGKVQKLALRDMARRLRLRAPDKARPVAAPA RHGPLTQTARL</aaseq>

Gene Sequence

<dnaseqindica>462..1997#1..198#atggatagcctgccaaagagagacgctaactacgtccctttgagccccatcaccttcctccacagagccgcctccgtctacgccgaccgcacctccgtcgtgtacggcgccaccagcttcacgtggcgccagacgcaccaccgctgcctccgcctcgccgccgcgctccagtccctcgccgtctcaaagaacgacgtcgtaagcaactctataccctattattatagtcgtaatcgggcgagttcagaggttctgagaagcagcgggtgagaacgactagctagtgagaatctaaagagttactgtagtttttttcatattttggcttctagaataactacaaatttttacaatctaggtaagaatctaaactattttgggagagttgaaaataagatgtagtatatgtgtcactctccatgcatgtcacgtgctaatttttgtatcatgtggttacgtaggtgtccgtcatcgcgcccaacacgccggcgctgtacgagatgcacttcgccgtgccgatggccggagcggtgctgaacgccatcaacacccgcctcgacgcggccaacgtcgccgccatcgtcaggcacgccgagcccaaggtgctcttcgtcgactaccagttcatccgcgtcgccaccgacgcgctcaaggccgtcatgggcgacggcgacggcgacggcggcgaggtcagggcgcccttgccgctgctcgtcgtcatcgacgacgccgacaagccgacgggcgcccgcgtcggcgagctcgagtacgagcagctggtggcgcggggagacccggcgaggtacccgcctcggccggtggaggacgagtgggacgccgtcgcgctcaactacacctccggcacgacgtcggcgcccaagggcgtcgtgtacagccaccgcggcgcgtacctcaacaccatgggccttcttctccagtggggcgtcggccacgagccggtctacctgtggtcgctcccgatgttccactgcaacggctggaccttcacctggggcgtggcggcgcgcggcggcacgaacgtctgcatccgcgcgccgaccgccgacgccatgtacgcggcgttcgccgcgcacggcgtcacccacatgtgcgccgcgccggtgctcttcaacatcctcctcgacggcgcgtgccgggagccgctgcgccgccccgtggaggtgctcaccggcggcgcgccgccgcccgcggcgctgctcgagcgcgtcgagcggctcggcttccacgtcacgcacgcctacggcatgacggaggccaccggcgtggtgatggtgtgcgagtggcgggagcagtgggacgccctgccaccgtcggagcgcgcgcggctcaaggcgcggcagggcgtgagcgcgctcaccctcgccgacgccgacgtgaaggacctcaagacgatggagagcgtgccccgcgacggcgccaccatgggcgaggtcgtgctccgcggcagcaacgtcatgaagggatacttcaagaacccgcgcgccacggcggacgcgttccgggacgggtggttcctcaccggcgacgtgggcgtcgtccacccggacgggtacgtggagatcaaggaccggtccaaggacgtgatcatctccggcggcgagaacatcagcagcgtggaggtggaggcggcgctgtaccagcacccggcggtgcgggaggcggcggtggtggccatgccgcacccgcactggggcgagacgccgtgcgcgttcgtggcgctgaagcgggagttcgccggcgccggcgaggtgagcgagcaggaggtggtgtccttctgccggaacaggatggcgcactacatggtgccgaggaaggtggtgttcgtcgacgagctccccaagaactccacggggaaggtgcagaagctcgcgctgcgcgacatggcgcgccgcctccgcctcagggcgcccgacaaggcgaggcccgtcgctgcccctgcccgccatgggccgttgactcaaactgctaggctttga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0555800, RefSeq:Os09g0555800