Os05g0541100

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0541100| Description = IQ calmodulin-binding region domain containing protein| Version = NM_001062721.1 GI:115465172 GeneID:4339471| Length...")
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Gene Name

Os05g0541100

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001062721.1 GI:115465172 GeneID:4339471

Length

2769 bp

Definition

Oryza sativa Japonica Group Os05g0541100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26924607..26927375

Sequence Coding Region

26924663..26924941,26925035..26925262,26926396..26926509,26926596..26927201

Expression

GEO Profiles:Os05g0541100

Genome Context

<gbrowseImage1> name=NC_008398:26924607..26927375 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26924607..26927375 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggcgtcggggaagtggatcaagtcgctggtgagcctcaaggcggcgccggaggggacgacgaaggggcggaggtggacccggctgtggcggagcagctcgtcggcgtcggcgtcggcgtcgaccgcgggggacgcgtcggagtcggcgtcgtcggaggccgacgcgttcagctcggtcgtcgccgccgtcgtccgcgcgccgcccagggacttccgcgtcatccgccaggagtgggccgccgtccgcgtccaggcggccttccgcgccttcttggcgcggcgggcgttgaaggcgctgagaggcatcgtgcggctgcaggcgctggtgcgggggcggctggtgcggcggcagctcgccgtgacgctcaagtgcatgaacgcgctgctgcgggtgcaggagcgcgcgcgggagcggcgggcgcgctgctcggcggatggccgggactcgcaggacgcggtcggcgagcgcgacggccgcgccgacccgatcaaacaagcagaggaacaatggtgtgacagtcaaggatcggtttctgaagtaagatcgaaaatacacatgaggcatgatgctgtggctaagagggaaagggcaattgcttatgcgctttctcaccagcctaggagttcaaaacaaagtgcaaggccaagctctcctgctagatctctgaggaaccatgagtctaataggtgcaatcacgactggagctatattgaaggatggatggcaacaaagccttgggagagcaggctcatggagcaaagccatgctgaattgaagtgttccaagaacagtggcgaactgaacttagctggcgcccaactttcaaatgcaagctcagttaagatgagagggaacagggtggcagcaaagcctccttctgtactctcagcttcttcttcagacttcccgtgtgatgtgagctctgcatcgacatcgtcagcaactccagcaagatccgacggtggacatggtgaaggtccgagttacatgagcttgacgaagtctgcaaaagcaaggcagagctgcaacagtccattccagattcagagacagcgatctggaggcatgtcatcttacaaaagggttgcactctctccattagatgttcagagcaacgcctgttcagaattttcagtcacctccaggaagttaaacagtctgtctctgaaaggccgtagcatgacaaggagcttggacaaggagaatgacaatctgttctag</cdnaseq>

Protein Sequence

<aaseq>MGASGKWIKSLVSLKAAPEGTTKGRRWTRLWRSSSSASASASTA GDASESASSEADAFSSVVAAVVRAPPRDFRVIRQEWAAVRVQAAFRAFLARRALKALR GIVRLQALVRGRLVRRQLAVTLKCMNALLRVQERARERRARCSADGRDSQDAVGERDG RADPIKQAEEQWCDSQGSVSEVRSKIHMRHDAVAKRERAIAYALSHQPRSSKQSARPS SPARSLRNHESNRCNHDWSYIEGWMATKPWESRLMEQSHAELKCSKNSGELNLAGAQL SNASSVKMRGNRVAAKPPSVLSASSSDFPCDVSSASTSSATPARSDGGHGEGPSYMSL TKSAKARQSCNSPFQIQRQRSGGMSSYKRVALSPLDVQSNACSEFSVTSRKLNSLSLK GRSMTRSLDKENDNLF</aaseq>

Gene Sequence

<dnaseqindica>57..335#429..656#1790..1903#1990..2595#cttcttcctcctcgcgctgcccccacaggaggagtttgtgagctctctcagcgtcgatgggggcgtcggggaagtggatcaagtcgctggtgagcctcaaggcggcgccggaggggacgacgaaggggcggaggtggacccggctgtggcggagcagctcgtcggcgtcggcgtcggcgtcgaccgcgggggacgcgtcggagtcggcgtcgtcggaggccgacgcgttcagctcggtcgtcgccgccgtcgtccgcgcgccgcccagggacttccgcgtcatccgccaggagtgggccgccgtccgcgtccaggcggccttccgcgccttcttggtaagacacagatttttctgatgctgctcttgatgtggcgcggtggtggtgatgctgtgctttgcgtggtgtgtcaatggcgtgtggagttaggcgcggcgggcgttgaaggcgctgagaggcatcgtgcggctgcaggcgctggtgcgggggcggctggtgcggcggcagctcgccgtgacgctcaagtgcatgaacgcgctgctgcgggtgcaggagcgcgcgcgggagcggcgggcgcgctgctcggcggatggccgggactcgcaggacgcggtcggcgagcgcgacggccgcgccgacccgatcaaacaagcagaggtacatgggaacacagcctgacccgcgtgcttctcttacgattgatacgtgcagtgctatatccttcttgcgttaatttctgaatgcaaaaaattgcattggtggcgcttcctctgtgcagtggattaaagaatcgaaatacttgtgtagtggagtatatataaatggtaatctgcatgccatttctgcaaattcgatggcattgctccatttcttgggactttgggagtggaatttggtagagtcagattgaagtgtgccttccattttcctatatcggtatgtaagatgggcctctagctcaacactggtacgtctatggcccatgggctgtgtgagtgtgtggttgaattcactcccatgtaggctttaatattgcaactactccctccgtttcacaatgtaagtcattctaacatttctcacattcatattgatgtaacatcaatctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaaaggaagtatttagaacaagatagagcttgcaccaatccaaatcaaagttataaagtaagattttgaattcagtcctcaaaatagttgtcttactgacatacaaaaatgatgtatttatttggagatcatttgaaggcttgaaaattgaaaattgttctttttagttaagttatactactaggtgttataatttgagaggtttgtactggtgccttaatttgattccttaagaagaaagtgatgtatgacttaatatggtgggggtacttttacctgaaaatgacttttcggactgataaggacaattaaggttccttttttagtaatgattgagtccattaagattgttgttttctctctcgtaatgacaacacatgtttgaatcgatcttggaagtgatcctgttaggtaagaagaggcaatgctgacaagaccgataacgccttttgcaattagttattgccaggcaaagttctaagctggaactgtgctggttcttttaaaaagtcctgaggccacacaggaatatattttttggtgttttaattagagagaaaaaaagcgaattttgctttaaaatgagatgtatatcgtattaacatgtcaaagattgtggcattgcaggaacaatggtgtgacagtcaaggatcggtttctgaagtaagatcgaaaatacacatgaggcatgatgctgtggctaagagggaaagggcaattgcttatgcgctttctcaccaggtatacttttgtatcattaagaggaactcttgcgctggacgacgcaagttgatataacatgctgctcacatccattttcctttcagcctaggagttcaaaacaaagtgcaaggccaagctctcctgctagatctctgaggaaccatgagtctaataggtgcaatcacgactggagctatattgaaggatggatggcaacaaagccttgggagagcaggctcatggagcaaagccatgctgaattgaagtgttccaagaacagtggcgaactgaacttagctggcgcccaactttcaaatgcaagctcagttaagatgagagggaacagggtggcagcaaagcctccttctgtactctcagcttcttcttcagacttcccgtgtgatgtgagctctgcatcgacatcgtcagcaactccagcaagatccgacggtggacatggtgaaggtccgagttacatgagcttgacgaagtctgcaaaagcaaggcagagctgcaacagtccattccagattcagagacagcgatctggaggcatgtcatcttacaaaagggttgcactctctccattagatgttcagagcaacgcctgttcagaattttcagtcacctccaggaagttaaacagtctgtctctgaaaggccgtagcatgacaaggagcttggacaaggagaatgacaatctgttctagcttgctgttctatggacaaattagctaatttgcatcttacatatatattatctgatccgttgttagcatttatacatccaagccaagctcaatgcctcattgcctctatcatgttttttgtatgcacaactgagattagtcattagttaaatgtctgaacctctttttatccct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0541100, RefSeq:Os05g0541100