Os05g0541400

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0541400| Description = Similar to Transcription factor LAX PANICLE| Version = NM_001187577.1 GI:297724284 GeneID:9269440| Length = 1245 bp|...")
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Gene Name

Os05g0541400

Description

Similar to Transcription factor LAX PANICLE

Version

NM_001187577.1 GI:297724284 GeneID:9269440

Length

1245 bp

Definition

Oryza sativa Japonica Group Os05g0541400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26941141..26942385

Sequence Coding Region

26941141..26942385

Expression

GEO Profiles:Os05g0541400

Genome Context

<gbrowseImage1> name=NC_008398:26941141..26942385 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26941141..26942385 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccttcgggtggagcgcgccagccgcgccgtgccagccgagctgcggccccggcggcgacgacgacgacgacgtcctcctcgccgccgtcttgggcgcgagcttcgagctccactccctcgtcgacggcggcggcaacggcgccgccggcgccgttcgctctgacgatgcctacggcctcgacgtcgacctgccgtcccaccagatgagcctcctgcgttgccaagatggtctgagtgctcttcacggcgacgcgtccccgacggcggcggcggcggcgttccttgactcggtggatgtgttgccagtgccggccatcgccggcgcgacgcacgacgacggcgggctcctcgataggttcgcgttcccgaacgttgccgagacgacgaccgtgcaagccgccgcgtcgaacaccgccttctccggatacagcagcaacaccaccggcggcggcaacatctcctccggcgagtcgaacacctacacggaggtggcgtcgacgccgtgcgccgtgtcgacgacgacgacgacgacggctctgcccccgtcgaagcggaagctaccagagaagtaccccgtcgtaggcacatcaccaacgacgaagaccacgacgacgtcggagacagccgcagagcgccggagcaccaagagaggggccgggggcagcagcagcatcacgttcggcggcggctgccacggcgccggtgcggcggcggcgctgctcggctacggccgcgggtacgagccggacacggaggcgatagcgcaggtgaaggagatggtctaccgcgcggcgccgatgcgcccggtcaccctcggcggccccgcctccgcctccgacccgtcatcccggccgccgccgccgccccagcggccgcggcgcaagaacgtgcgcatctccagcgacccgcagacggtggcggcgcggctgcggcgggagcgggtgagcgagcgcctgcgcgtgctgcagcggctggtccccggcggcagcaagatggacacggccaccatgctcgacgaggccgccagctacctcaagttcctcaagtcgcagctcgaggcgctggaaaccctagggaatggcaatggcaacggcaacctgttgcaccatggctactacactggatcaagaaatgctactgctactgctgctactggttctagcaatagcactgtacttgcatttgggcgagatggacttgctggctttgtgaaatccaataggaatttgcaattgtag</cdnaseq>

Protein Sequence

<aaseq>MDAFGWSAPAAPCQPSCGPGGDDDDDVLLAAVLGASFELHSLVD GGGNGAAGAVRSDDAYGLDVDLPSHQMSLLRCQDGLSALHGDASPTAAAAAFLDSVDV LPVPAIAGATHDDGGLLDRFAFPNVAETTTVQAAASNTAFSGYSSNTTGGGNISSGES NTYTEVASTPCAVSTTTTTTALPPSKRKLPEKYPVVGTSPTTKTTTTSETAAERRSTK RGAGGSSSITFGGGCHGAGAAAALLGYGRGYEPDTEAIAQVKEMVYRAAPMRPVTLGG PASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKM DTATMLDEAASYLKFLKSQLEALETLGNGNGNGNLLHHGYYTGSRNATATAATGSSNS TVLAFGRDGLAGFVKSNRNLQL</aaseq>

Gene Sequence

<dnaseqindica>1..1245#atggacgccttcgggtggagcgcgccagccgcgccgtgccagccgagctgcggccccggcggcgacgacgacgacgacgtcctcctcgccgccgtcttgggcgcgagcttcgagctccactccctcgtcgacggcggcggcaacggcgccgccggcgccgttcgctctgacgatgcctacggcctcgacgtcgacctgccgtcccaccagatgagcctcctgcgttgccaagatggtctgagtgctcttcacggcgacgcgtccccgacggcggcggcggcggcgttccttgactcggtggatgtgttgccagtgccggccatcgccggcgcgacgcacgacgacggcgggctcctcgataggttcgcgttcccgaacgttgccgagacgacgaccgtgcaagccgccgcgtcgaacaccgccttctccggatacagcagcaacaccaccggcggcggcaacatctcctccggcgagtcgaacacctacacggaggtggcgtcgacgccgtgcgccgtgtcgacgacgacgacgacgacggctctgcccccgtcgaagcggaagctaccagagaagtaccccgtcgtaggcacatcaccaacgacgaagaccacgacgacgtcggagacagccgcagagcgccggagcaccaagagaggggccgggggcagcagcagcatcacgttcggcggcggctgccacggcgccggtgcggcggcggcgctgctcggctacggccgcgggtacgagccggacacggaggcgatagcgcaggtgaaggagatggtctaccgcgcggcgccgatgcgcccggtcaccctcggcggccccgcctccgcctccgacccgtcatcccggccgccgccgccgccccagcggccgcggcgcaagaacgtgcgcatctccagcgacccgcagacggtggcggcgcggctgcggcgggagcgggtgagcgagcgcctgcgcgtgctgcagcggctggtccccggcggcagcaagatggacacggccaccatgctcgacgaggccgccagctacctcaagttcctcaagtcgcagctcgaggcgctggaaaccctagggaatggcaatggcaacggcaacctgttgcaccatggctactacactggatcaagaaatgctactgctactgctgctactggttctagcaatagcactgtacttgcatttgggcgagatggacttgctggctttgtgaaatccaataggaatttgcaattgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0541400, RefSeq:Os05g0541400