Os11g0529500

From RiceWiki
Revision as of 21:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0529500

Description

Type III polyketide synthase family protein

Version

NM_001074538.2 GI:297611927 GeneID:4350633

Length

1690 bp

Definition

Oryza sativa Japonica Group Os11g0529500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:21054610..21056299

Sequence Coding Region

21054762..21055837,21056061..21056226

Expression

GEO Profiles:Os11g0529500

Genome Context

<gbrowseImage1> name=NC_008404:21054610..21056299 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:21054610..21056299 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcccactgccgacgatggagaccgcgcacgccaccgtgctcgccatcgggacggcgaacccggcgaagtgcgtggcccaggaggagtacgtcgactggtacttccgggtcaccaagagcgaccacctggtcgaccttaaagccaagatgaagaggatgtgtgacaaatcaggcatcaggaagcgccatttgtgcctcacggaggacatgatcgctgcccatccagagctcctcgaccgcgccgccccgtccctcgacgcgcgcctcggcatcgccagggacgccgtgccggagctggccatggccgcggcggcgagggcgatcgccgagtggggccgccccgccgcggacatcacccacctcgtcgtctccaccaacgccggcgcccacgcccccggcgccgacgcgcggctcgcggagctcctcggcctccgcgccaccgtccagcgcaccgtcctctacatgcacggctgctccgccggctgcagcgcgctccgcctcgccaaggacatcgccgagagcaaccgccgcgcgcgcgtgctcgtggcgtgcgcggaggtcttcctcatagcgctcgccgcccccgacgaggcccgcctcgacgccctcgtcgccgcgtcgctgttcggcgatggcgccggtgctgtcatcgtgggcaccgacggcgacgacgacccgggagcccccgtcgaacacccccccatcttccacatgttgtccgcgtcgcagaccaccatagccgggacccaccagagagtctccctgcagctgagcgagcgcggcctcgactacaagatctccggcgaggtgccggcgctggtgcgcgccggcatcgagcggtgcatggaggacgcgctggcgccgctcggcctcgccggctgcggcggcggatggaaccacctcttatgggcgatgcacccgggcggccgcgctatcttggacagctacgaggcgggtctccggctggagcccgggaagctggcggcgagccggcgggtgctgagcgagtacggcaacatgagcggcgccgcgatcatcttcgtcctcgacgagctgcgacgccggcgccggcggcgggatggtggggaagaagaggaggaggagtcggacgagtactgcgagtggggtgccatggttggggtcgggccggggctcaccattgagacgatggtgctgcgtgccagtgccaccggcggccatgtcggcgacgaagtcaagaagtcgactactgcttga</cdnaseq>

Protein Sequence

<aaseq>MASPLPTMETAHATVLAIGTANPAKCVAQEEYVDWYFRVTKSDH LVDLKAKMKRMCDKSGIRKRHLCLTEDMIAAHPELLDRAAPSLDARLGIARDAVPELA MAAAARAIAEWGRPAADITHLVVSTNAGAHAPGADARLAELLGLRATVQRTVLYMHGC SAGCSALRLAKDIAESNRRARVLVACAEVFLIALAAPDEARLDALVAASLFGDGAGAV IVGTDGDDDPGAPVEHPPIFHMLSASQTTIAGTHQRVSLQLSERGLDYKISGEVPALV RAGIERCMEDALAPLGLAGCGGGWNHLLWAMHPGGRAILDSYEAGLRLEPGKLAASRR VLSEYGNMSGAAIIFVLDELRRRRRRRDGGEEEEEESDEYCEWGAMVGVGPGLTIETM VLRASATGGHVGDEVKKSTTA</aaseq>

Gene Sequence

<dnaseqindica>463..1538#74..239#gtgtgcatcctctctcaccttacagtgcttttcgttctcgatctcggcaacgacgacgacgacggcgactgccatggcgagcccactgccgacgatggagaccgcgcacgccaccgtgctcgccatcgggacggcgaacccggcgaagtgcgtggcccaggaggagtacgtcgactggtacttccgggtcaccaagagcgaccacctggtcgaccttaaagccaagatgaagaggatgtgtgagatttcttaaacgatgatatgcttcatcagatgtttttaatttaatgttgagacattagattccttcagtttcaagctattaatccactaaaataacagagaaatactaaaactattaaccttttattaatccttttattttatgttgaaaccgtttctccatcttttaattccttcagtttctctgttaatgttgaaacattttcgcttcattggcaggtgacaaatcaggcatcaggaagcgccatttgtgcctcacggaggacatgatcgctgcccatccagagctcctcgaccgcgccgccccgtccctcgacgcgcgcctcggcatcgccagggacgccgtgccggagctggccatggccgcggcggcgagggcgatcgccgagtggggccgccccgccgcggacatcacccacctcgtcgtctccaccaacgccggcgcccacgcccccggcgccgacgcgcggctcgcggagctcctcggcctccgcgccaccgtccagcgcaccgtcctctacatgcacggctgctccgccggctgcagcgcgctccgcctcgccaaggacatcgccgagagcaaccgccgcgcgcgcgtgctcgtggcgtgcgcggaggtcttcctcatagcgctcgccgcccccgacgaggcccgcctcgacgccctcgtcgccgcgtcgctgttcggcgatggcgccggtgctgtcatcgtgggcaccgacggcgacgacgacccgggagcccccgtcgaacacccccccatcttccacatgttgtccgcgtcgcagaccaccatagccgggacccaccagagagtctccctgcagctgagcgagcgcggcctcgactacaagatctccggcgaggtgccggcgctggtgcgcgccggcatcgagcggtgcatggaggacgcgctggcgccgctcggcctcgccggctgcggcggcggatggaaccacctcttatgggcgatgcacccgggcggccgcgctatcttggacagctacgaggcgggtctccggctggagcccgggaagctggcggcgagccggcgggtgctgagcgagtacggcaacatgagcggcgccgcgatcatcttcgtcctcgacgagctgcgacgccggcgccggcggcgggatggtggggaagaagaggaggaggagtcggacgagtactgcgagtggggtgccatggttggggtcgggccggggctcaccattgagacgatggtgctgcgtgccagtgccaccggcggccatgtcggcgacgaagtcaagaagtcgactactgcttgagcctcgaagctatagctaagctagcgagctcgatccattcgctgctgagcttgaagcgtcttgagtgtgggtgcggtcgtgcagagtatgcaagtaaaaaaaaagacggaaataagatactataaaataatgggaaataactaaatactccc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0529500, RefSeq:Os11g0529500