Os05g0543300

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0543300| Description = WD40-like domain containing protein| Version = NM_001062738.1 GI:115465206 GeneID:4339488| Length = 2843 bp| Defini...")
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Gene Name

Os05g0543300

Description

WD40-like domain containing protein

Version

NM_001062738.1 GI:115465206 GeneID:4339488

Length

2843 bp

Definition

Oryza sativa Japonica Group Os05g0543300, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27024265..27027107

Sequence Coding Region

27024371..27024445,27024528..27024628,27025230..27025403,27025483..27025582,27025700..27025816
,27025903..27026040,27026138..27026219,27026665..27026714,27026782..27026907

Expression

GEO Profiles:Os05g0543300

Genome Context

<gbrowseImage1> name=NC_008398:27024265..27027107 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27024265..27027107 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgacgctgtcgcagctcgacgacgggatcgtccgcgggatggccatcggcgcggtattcaccgactacgctgggaagataaactgcctcgacttccaccgcaaggaggatctcctcgtcacctccagcgaggacgactccatacgcctctacaacatcaccagcgccacgttgttgaagactacatatcataggaaacatggtgctgaccgtgtctgtttcactcaccatccgagttctatcttatgttcatcaagatacaatctagagtcagcagagtcacttcgttatttatcactgtatgacaaccgttgcttaagatattttaaaggacacaaagacagggttgtttcactatgtatgtcacctgtcaacgatagttttatgtcaggatcacttgatcacagtgtcaggatatgggatcttcgtgtaaatgcttgtcagggtatactacgtttgcgtggtaggccttctgttgcatatgatcagcagggacttgtttttgccgtggcaatggaaggaggtgctattaagctatttgattcccggtcatatgacaaaggtccctttgacactttcttggttggtggagatacagctgaagtttctgacatcaaatttagcaatgatggcaagtccatgcttttgacaacaaccaacaaccatatatatgttctggatgcatatggaggggataagaggtgtggctttagtctggagtcatctcccaatgtagcaactgaagctgcttttactccagatggccaatatgtaatttcaggatctggtgatggtaccttgcatgcttggaacatcaatacaatacaagagattgcttgttggaacagtcacatcggtcctatcactgctttgaagtgggctccccgtcgagcaatgtttgcaactgcgtcaactgccctaactttctggattcccaacaattccagttcgaattag</cdnaseq>

Protein Sequence

<aaseq>MAATLSQLDDGIVRGMAIGAVFTDYAGKINCLDFHRKEDLLVTS SEDDSIRLYNITSATLLKTTYHRKHGADRVCFTHHPSSILCSSRYNLESAESLRYLSL YDNRCLRYFKGHKDRVVSLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPS VAYDQQGLVFAVAMEGGAIKLFDSRSYDKGPFDTFLVGGDTAEVSDIKFSNDGKSMLL TTTNNHIYVLDAYGGDKRCGFSLESSPNVATEAAFTPDGQYVISGSGDGTLHAWNINT IQEIACWNSHIGPITALKWAPRRAMFATASTALTFWIPNNSSSN</aaseq>

Gene Sequence

<dnaseqindica>107..181#264..364#966..1139#1219..1318#1436..1552#1639..1776#1874..1955#2401..2450#2518..2643#actctacaacagatcggaaacctcgcgggcggcggcggcggcggcgcgggtaagcgagcggacaccggcgacgagcgcgaggaggaggaggaggaggaaggagaagatggcggcgacgctgtcgcagctcgacgacgggatcgtccgcgggatggccatcggcgcggtattcaccgactacgtgagttctcccgccgcgaaaatcccccatttgtttcgactgattcgccgtggtttcctaatcgaactggtggtggtggcaggctgggaagataaactgcctcgacttccaccgcaaggaggatctcctcgtcacctccagcgaggacgactccatacgcctctacaacatcaccagcgccacgtgagtgcactgattttgttttatttttgttttttagttttagttttacctatgttctgtttcccctggggcatcttgttcgttagaccttcatattgttagatcgttgcagtacgtggatgcgagagtggtgagctctgctgctgcattctcagtttggcttatagattccatagtttgatggttagctttgtgttggggatgttatgtgtggtgggttctacttttcggaactcgggagatgtcaatatcttgctgctagaatccatacttcatgtgtgtcagttctgtgcttctgcttgatggatatatactgatgcactttttatgacctgcgatcgttttctgtctgattaacaacattgctagggatatgcattgcagtcatactggcagcatttgttttgcccttcttttctctattaatgtaatcgttgcttttttttttcattagatttaacctgtcctgcagtatgctctgaattgctcgaattttgctttgtttgatgttaaccaaactgttgagagcattcaataatgtgttgtgtacattttctttcttctgatgaactgatgttataaatggggggctattgtttaggttgttgaagactacatatcataggaaacatggtgctgaccgtgtctgtttcactcaccatccgagttctatcttatgttcatcaagatacaatctagagtcagcagagtcacttcgttatttatcactgtatgacaaccgttgcttaagatattttaaaggacacaaagacaggttggctatgttcttgtttctttcttgtctagcgattatgtctaggataaattatgagaggtgcactatttcatttcagggttgtttcactatgtatgtcacctgtcaacgatagttttatgtcaggatcacttgatcacagtgtcaggatatgggatcttcgtgtaaatgcttgtcaggttcggacaccattccttgtttaatgtgatcaatcatatatacacaaattgcatttagtagggtaatagtaccatttgtcatctcagggctttccatgcttacttgtttagcattagggtatactacgtttgcgtggtaggccttctgttgcatatgatcagcagggacttgtttttgccgtggcaatggaaggaggtgctattaagctatttgattcccggtcatatgacaaagttggtattcagcttgaatctcaaaaactgtaaattcctataaggcttgcggaagttcttatcttgggtgccaaatacaatttcagggtccctttgacactttcttggttggtggagatacagctgaagtttctgacatcaaatttagcaatgatggcaagtccatgcttttgacaacaaccaacaaccatatatatgttctggatgcatatggaggggataaggtcagttacttctgttgcagaaaaaaatgcttcaaattgaactaagtgcataatttcctcaaatcaaatcattgacaccctcaaaatccttttgcagaggtgtggctttagtctggagtcatctcccaatgtagcaactgaagctgcttttactccagatggccaatatgtaatttcaggtatgatattcttgtttttccatttgtatgccatatcatttggcatatatatattccgatatgaactagtagtacacaacaatttacccaactggttcccctgtaagtaaaacttctactaaaagtgctcctaacttaccttgtgcgaccgtcgcttctactaagaacagacctaatgataattggagcatatatttcgccttcaacatgcctttaaccatccgaatagaaatattttgttggcatgatatgctcatactgctttttatgtaccaatataacttatatatgctatagtttctgttgcctattgacagttccactactgctgaaagtgaaggcctatatatgctctaacatttaacaaaacttggaactttttgataccaatatttcaggctgtggccaaagcttttgttgaaaacctttttgcttgattttgcaggatctggtgatggtaccttgcatgcttggaacatcaatacaatacaagaggtgctctttcttaaatcatgcttttaatatgctgttctttgcctcttaagtgtttttccttttgtagattgcttgttggaacagtcacatcggtcctatcactgctttgaagtgggctccccgtcgagcaatgtttgcaactgcgtcaactgccctaactttctggattcccaacaattccagttcgaattaggtgcctagcaaaaaggatggaacgtgtgatatgctgattcaacaaacacttgtatcctgttctttcctgcacaagatgggtatcgtgtatgaagtatcaatctctttattaccatctgtggcaaaaaatgatgatgtacaccttcccattgtattctcttatggctattgttaatacacataaaattttctgcatcagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0543300, RefSeq:Os05g0543300

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os05g0543300&oldid=14817"