Os05g0543600

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0543600| Description = Similar to Transcription factor MYB86 (Myb-related protein 86) (AtMYB86) (Myb homolog 4) (AtMyb4)| Version = NM_00106...")
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Gene Name

Os05g0543600

Description

Similar to Transcription factor MYB86 (Myb-related protein 86) (AtMYB86) (Myb homolog 4) (AtMyb4)

Version

NM_001062740.2 GI:297604843 GeneID:4339490

Length

2330 bp

Definition

Oryza sativa Japonica Group Os05g0543600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27047718..27050047

Sequence Coding Region

27047718..27047760,27049123..27049252,27049378..27050047

Expression

GEO Profiles:Os05g0543600

Genome Context

<gbrowseImage1> name=NC_008398:27047718..27050047 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27047718..27050047 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacatgatcacaaagcttgttatagagttgtcatgctcacggttgcagcgatgcggcaagagctgcaggctgcggtggatcaactacctcaggccagacctgaagcgcgggagcttctcgcagcaggaggaggacctcatcgtcgcgctgcacgagatcctcgggaacaggtggtcgcagatcgcgtcgcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaagaagctccggcaacgcggcctcgacccggccacgcacaagcccatcgccgccgccgccgcggcggcgacgtcctcggagtcggcggtcacccaggtggatgaggatcacaagccccacggcgccgccgccgccgccgccgccgccgacggcctcgccgcgaacgccaagcagtcggtgttcgacccgttcccggtgaccgacttcggcgccggcttcgacctcggcgcggcgaacatggcggcggcgctgtacggctcccaccccgacgacggcgccgggttcgtcgccgactacagcagcgtgctcgacgtgtcggagaacctgggctacggcgagagctccagcaacagcagcaactggacctgcgccgaggtgagcaatgtgctcgacagcgaggtgctcaactgggccgcctcggccggcgccgacgccgccgccaaggcagagcccttcgccgacatggagcagcagcacagtggctatggcggcgagtatcaggtggaagacgacgccacgctggagcacaagttctcgctaccatgccatgagcagagcttggctcaattcgacttcaacttggaatacttctga</cdnaseq>

Protein Sequence

<aaseq>MNMITKLVIELSCSRLQRCGKSCRLRWINYLRPDLKRGSFSQQE EDLIVALHEILGNRWSQIASHLPGRTDNEIKNFWNSCLKKKLRQRGLDPATHKPIAAA AAAATSSESAVTQVDEDHKPHGAAAAAAAADGLAANAKQSVFDPFPVTDFGAGFDLGA ANMAAALYGSHPDDGAGFVADYSSVLDVSENLGYGESSSNSSNWTCAEVSNVLDSEVL NWAASAGADAAAKAEPFADMEQQHSGYGGEYQVEDDATLEHKFSLPCHEQSLAQFDFN LEYF</aaseq>

Gene Sequence

<dnaseqindica>1..43#1406..1535#1661..2330#atgaacatgatcacaaagcttgttatagagttgtcatgctcacgtaacccaacgcctaaatcaaagggatcatgctaggaaaaaaaacataattagaacactgatttaaacaaaaaatgaaatgctagagaaacataaaaagcaaaatcgtctaaaattccaattttccctccatttttcattcttcgccactgtaatccgatcgttaccgtgtgtccgcttttcttccatcaactaatacagcacctgcgctccgccacatccatcaaacgatcagtgagattagtgactttaatttgattaatcaattaattaaattaattatctctctcaagatcagcgagtggccgtgagctgattactgtcatcagtagtagtaaacacagtgattcccagtcagttcgatcatgtcacgacgggcgttttcagggggtgatcaagttggacaagtaaaacgcgatgatctgacgcgatttttctccgtaccacatcgcgattctctgcacaggtccccgatcgagctcattgatggcttacagttacacttgccattaaccagtgtttagtctctctcttaactgtactagctggattagtatattatattgctgtccaaagcagaaatcaatcttaggcaaaaaaaaaaagaaaaagaaaatggaaactaaatctctctgtctctctctctgatctctaactaacactgtaattagagagagaaattaagtgaggctctttggcgcgaactagcagtatttttatccagcgagatggaggtatcttgagctctaatccagcgagctcgagaggggagtggcagcttgcttagaaaccacttgatcgctgcctcacctcaccacaccacacaaacacctattctctctctctagctcgctgtctctgtgtctctctctaactgaagttgcaggagttcttggcaagcttccccatatatacccgaccaccaccgggcaacggttgatcgatatagccagtgaggagaagggttatagaggctgatcgaccatcgatcgacgtcgtggcgagcggctagtgttcgttgtcgtcgtcggcggcggcgaggtggtggtggtggtagctacgtaggttgtggacatcgatctagaggtagaggcagggagggggaggaatgggacggctgtcgtcgtgcggcggcgtgcaggcgaagctgaggaaggggctttggtctcccgaggaagacgataagctgtacaatcacatcatccgacatggcgtcggctgctggagctccgtccccaagctcgcaggcaagcaagaacgcacgcaattcaaatgagacaccaactgttcgatcgatcgatcgatcgccattgccgatttggcgagcttgattgggctaattttggttttttgggtcgtgcagggttgcagcgatgcggcaagagctgcaggctgcggtggatcaactacctcaggccagacctgaagcgcgggagcttctcgcagcaggaggaggacctcatcgtcgcgctgcacgagatcctcgggaacaggtcggtttcatgtcttggattctgcattgccgtttcggagcttgcttgctttcttgcaatggcggcagccatggaggttggtcggagggataaaggatttgagggggaataatggtgtggtgcaggtggtcgcagatcgcgtcgcacttgccggggaggacggacaacgagatcaagaacttctggaacagctgcctcaagaagaagctccggcaacgcggcctcgacccggccacgcacaagcccatcgccgccgccgccgcggcggcgacgtcctcggagtcggcggtcacccaggtggatgaggatcacaagccccacggcgccgccgccgccgccgccgccgccgacggcctcgccgcgaacgccaagcagtcggtgttcgacccgttcccggtgaccgacttcggcgccggcttcgacctcggcgcggcgaacatggcggcggcgctgtacggctcccaccccgacgacggcgccgggttcgtcgccgactacagcagcgtgctcgacgtgtcggagaacctgggctacggcgagagctccagcaacagcagcaactggacctgcgccgaggtgagcaatgtgctcgacagcgaggtgctcaactgggccgcctcggccggcgccgacgccgccgccaaggcagagcccttcgccgacatggagcagcagcacagtggctatggcggcgagtatcaggtggaagacgacgccacgctggagcacaagttctcgctaccatgccatgagcagagcttggctcaattcgacttcaacttggaatacttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0543600, RefSeq:Os05g0543600