Os11g0557400

From RiceWiki
Revision as of 21:21, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0557400

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001074624.1 GI:115485896 GeneID:4350722

Length

1658 bp

Definition

Oryza sativa Japonica Group Os11g0557400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:22553577..22555234

Sequence Coding Region

22554386..22555087

Expression

GEO Profiles:Os11g0557400

Genome Context

<gbrowseImage1> name=NC_008404:22553577..22555234 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:22553577..22555234 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctcacggcgaccacagttttgccaaggtcatcactgttggaggagaagctggcaccataggctgggttgacctctggaagggcatcctcttctgtgacgtgctcaaggacaacccagtgttcctctatgtctcgctcccaccccccctcatggcaaccaggaagctgcgaggctgcccaagaaatactcgtgacgttagtgtcatcaaaggtcttatcaggtatgttgagctgcagattcacatcaagccaggctcgtttacccgaggcaactacatttccaatggctggacagttgccacatggagcaggatcagctctaatccttttgaggattggcaccagaactgtaaacttgatgcttctcaggtctcttttgaaaataacccagtgcattatgaaaagctgcctgagctgctagacgaccaaggcatacctcagctaaccatggtgcggctccacacaggtcatcctgttctcagcatgcacgaccatgacattgtttacctcatgactaaggtcaactacttagatgacaaagcatgggttcttgccattgacatgaggaacagcacattacaaggtgttgctgaattcaatgcggaaagagtgatcgccttaaggtacgcctttacgcaaagtgggatctctgaatatctgaacatgcttccaggtataaagggaaaccgaaaaagataa</cdnaseq>

Protein Sequence

<aaseq>MSHGDHSFAKVITVGGEAGTIGWVDLWKGILFCDVLKDNPVFLY VSLPPPLMATRKLRGCPRNTRDVSVIKGLIRYVELQIHIKPGSFTRGNYISNGWTVAT WSRISSNPFEDWHQNCKLDASQVSFENNPVHYEKLPELLDDQGIPQLTMVRLHTGHPV LSMHDHDIVYLMTKVNYLDDKAWVLAIDMRNSTLQGVAEFNAERVIALRYAFTQSGIS EYLNMLPGIKGNRKR</aaseq>

Gene Sequence

<dnaseqindica>148..849#cgctaccaaccccacatcgaccatcctgccttgtacgtcatccccgccctcactaacggatcagtgcctgggcgttacgacctccacctattacactcgaatgccgagagctggatcagcaaacggggcttgccacgtccacattcaatgtctcacggcgaccacagttttgccaaggtcatcactgttggaggagaagctggcaccataggctgggttgacctctggaagggcatcctcttctgtgacgtgctcaaggacaacccagtgttcctctatgtctcgctcccaccccccctcatggcaaccaggaagctgcgaggctgcccaagaaatactcgtgacgttagtgtcatcaaaggtcttatcaggtatgttgagctgcagattcacatcaagccaggctcgtttacccgaggcaactacatttccaatggctggacagttgccacatggagcaggatcagctctaatccttttgaggattggcaccagaactgtaaacttgatgcttctcaggtctcttttgaaaataacccagtgcattatgaaaagctgcctgagctgctagacgaccaaggcatacctcagctaaccatggtgcggctccacacaggtcatcctgttctcagcatgcacgaccatgacattgtttacctcatgactaaggtcaactacttagatgacaaagcatgggttcttgccattgacatgaggaacagcacattacaaggtgttgctgaattcaatgcggaaagagtgatcgccttaaggtacgcctttacgcaaagtgggatctctgaatatctgaacatgcttccaggtataaagggaaaccgaaaaagataaaggatgttgttgctggaaccctcttgcaaggaggagtgtaaaatccgcatggtacataatatggtggatggtatgaatgttgattaatggataaggtaaaggtctgaaggctgggatgaaggcaagtttgctctcctcaatgttcgtatcaagaaagagagctaaagctcgcaagcagctcccctcgtatgctgtatccatcactgcctaccatgctggcttgctgcttggagccgccttcctcacctcttgcctcgtgtccttgtctgcaccttggtcagattttgtcagcgccagagcttggaggagccgccttccttgccacatggaactgcctgcgttgtatccttgtctatgctcggagtgggagagttcacttgaacctgcgctggagctctgaggaggtggatcttgccattcgctcccgttggggcttactggtcactgcgtgagaatacatgaaggtccaggctctagtttggggcaattaatctggatagatatggtccagactccagatggataaggtagactattaggtgcgggattatgttagtgttctgagtaggcattcttgctaatgtgggaattgtagctgtacgacatggaaaatgtagtcccaaatgtatgggaattttgcatcattttcaataagttatgaatgagtgagattcagtgaggtactttttcccttcagttgaatctgtattactgctttgagaagatgttctctagaagcatagtgtaatcttgtcaaaatatcgagtctgggatttttaggcagttgtaaaatatgattgcatcctcac</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0557400, RefSeq:Os11g0557400