Os05g0543700

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Revision as of 10:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0543700| Description = Similar to Chaperone protein dnaJ| Version = NM_001062741.1 GI:115465212 GeneID:4339491| Length = 3688 bp| Definiti...")
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Gene Name

Os05g0543700

Description

Similar to Chaperone protein dnaJ

Version

NM_001062741.1 GI:115465212 GeneID:4339491

Length

3688 bp

Definition

Oryza sativa Japonica Group Os05g0543700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27052485..27056172

Sequence Coding Region

27052757..27052837,27053358..27053438,27053564..27053736,27053814..27053972,27054233..27054362
,27054481..27054643,27055061..27055143,27055639..27055698,27055853..27055939

Expression

GEO Profiles:Os05g0543700

Genome Context

<gbrowseImage1> name=NC_008398:27052485..27056172 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27052485..27056172 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctcccccgccgagatcaagaaggcctattacctcaaggcgaagcaggtgcatccggacaagaatcctgggaaccccgatgcggcgcagaaatttcaggaactcggagaggcataccaagttttaagcgatccttcaaaaagggaggcttatgataagcatggaaaggaggggcttcctcaggataacatggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagattatgttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaacagtcaagaagcaagagggaaggttcaagagaaaattaaagagttacaaaaagaaagagaacagaagcttattcagagcctaaaagatcgacttcaaccatttgtggatgagagaaaggatgaatttgttaactgggcaaatggggaagctcagcggttatcccatgcagcttttggcgaggctatgctcaccactattggctatatttatgtgcgacaagcagcgagagaacttggaaagagtaagttgtatatgggtgtaccattcatagctgagtgggtcagagacaagggccactgcattaaatcacaggttaatgccgcttcaggcgctatcgctctgatgcagctacaagaagggatgaaaaagatggaggaaagtgacaataaggaggaccagattatgaagagtttcgaggagaaaaaagatgccatgcttagttacctatggaaaattaatgtggttgatattgagtcaacacttacacatgtttgccaagcagttttgaaagacgccagtgtcccaaaagatgttctgaagttacgagcaagagcattgaaaaagcttgggacgatattccagggtgcgaagtctctgtaccatcgtgaaaacagcctacaggtggaaaccagcccacggcagggagcagcaacatcgaactga</cdnaseq>

Protein Sequence

<aaseq>MVKDTAYYDTLGVSVDASPAEIKKAYYLKAKQVHPDKNPGNPDA AQKFQELGEAYQVLSDPSKREAYDKHGKEGLPQDNMVDPAAVFGMLFGSDYFEDYVGQ LALASIASVEVEENLNSQEARGKVQEKIKELQKEREQKLIQSLKDRLQPFVDERKDEF VNWANGEAQRLSHAAFGEAMLTTIGYIYVRQAARELGKSKLYMGVPFIAEWVRDKGHC IKSQVNAASGAIALMQLQEGMKKMEESDNKEDQIMKSFEEKKDAMLSYLWKINVVDIE STLTHVCQAVLKDASVPKDVLKLRARALKKLGTIFQGAKSLYHRENSLQVETSPRQGA ATSN</aaseq>

Gene Sequence

<dnaseqindica>3336..3416#2735..2815#2437..2609#2201..2359#1811..1940#1530..1692#1030..1112#475..534#234..320#ccactccttctagaggaaaaggatcgattttttttcttccccaatttcttcctggtgctcacctcctcctcccccgggatcttccagaagcttccagaactgaccttggtaaagaatctttctctctctggctttcttggtggaggcttggtttctctgttggtttctcctggtgtgattggaggttggcgtttgcaggtgcgggcgagatccaaggaggagggtttcctgccatggtgaaggataccgcgtactacgacaccctgggggtcagcgtggacgcctcccccgccgagatcaagaaggcctattacctcaaggtgaattcctttttgcgcctttgatttcttcatctttttttttcttgattgattgatttcgtgtgtcgtcatcaatgtagaattgcagatagctattggcctattgagctaatcttcgtgtgccaaattgatttttttttaatctctcttccaggcgaagcaggtgcatccggacaagaatcctgggaaccccgatgcggcgcagaaatttcaggtagttttttttttctttttctcccgtgccttctgttgatatctgtgattctgtgctagtaatttgatttgttggatttgattgtggaatgaaaagtaagactacgtgttcacaaaaacatgttttttctttatgaattggaatagtttactgcaagtgtcaaagctatgctatagctagaagaatgtgaataggctggagtttgcttgatttttaccaagtgatatcagatttttgcaatgcagcgcctgtgttacttgttaagaggcatagttttatcgtcggagatgccatgattttcagtatgagcatcttctgggtgttaagaggcagagttttatcgacagagatgccagtatgttttttgagcggaatgtttggttgtttggtgtatatacattgaagctattgtgttgattgtctattcggcatcaaatgcctgcttaaattatttccctctatgaattattgaattaaatagcttgatgttaacaggaactcggagaggcataccaagttttaagcgatccttcaaaaagggaggcttatgataagcatggaaaggaggggcttcctcagtaagtcacgaattttttttatgtctggtaaacaatgggtgttcttctcaaaagataaaagggtggcaactaaaaaactgtttaatctttaatctgaacaagtgtgctgagaatatagagcgggccaatttggtaaattaattgcacagtgcaacaagaaaattggagtgtattcaaatgacctgtcaatttctatgggttgatacttggtagatcactatttccttagctataaaagcacatctgtttaaaggaaaaggagacttctctaggcacgttatgaaattcaaacagtcagttatggaacacaatattttcagttaagatgatatttatagttcaatagaaactaaagaaattatgcgttgtgctgtaccctttaagttggcgtcttacacattttacacggcatttcagggataacatggtggatcctgctgctgtctttgggatgctttttggaagtgactattttgaagattatgttggacagcttgcactggcatccatagcatcagtggaagtcgaggaaaacttaaacagtcaagaagcaagagggaaggttcaagagaaaattaaagtatgttactctcgaagttccctactgttttgcttaaatagtttcattaaagttagcattccacttaggctctaggatgctgagacacaaattaaaactaaagcttcctgtgtgacaggagttacaaaaagaaagagaacagaagcttattcagagcctaaaagatcgacttcaaccatttgtggatgagagaaaggatgaatttgttaactgggcaaatggggaagctcagcggttatcccatgcaggtacatcatgtgattgtgtactactttgtttttatttgagagggctatatgctttctgcagtcacttttactttgtttgataaatcagttgctttcaccagcagattggcaaattggatatgattacatccacatagacatagattttgtggggtcttaattttaaaacaaattgtatagaactcatcgttgcacgttccctaattcactttattcatacgagtattttaccattggcttatcaaatgaatatttttcagcttttggcgaggctatgctcaccactattggctatatttatgtgcgacaagcagcgagagaacttggaaagagtaagttgtatatgggtgtaccattcatagctgagtgggtcagagacaagggccactgcattaaatcacaggttaatgccgcttcaggtacaccccgagacactgttttgtttctggtgcaatatacgattcaagtactccttgataattagctcctgttgcaggcgctatcgctctgatgcagctacaagaagggatgaaaaagatggaggaaagtgacaataaggaggaccagattatgaagagtttcgaggagaaaaaagatgccatgcttagttacctatggaaaattaatgtggttgatattgagtcaacacttacacatgtttgccaagcagtaagtttttgcgtatccttgttagtggaagaaggcttgcatagtaacaattatgcactgtgcacgtcaaagaagaaagaactaaaaacatatgagttacttttgtgtaatcttctaccttacaggttttgaaagacgccagtgtcccaaaagatgttctgaagttacgagcaagagcattgaaaaagcttgggacgatattccaggtaagcttatgttaacgccttctgcctgtttcaaccaagtactcatggaaaaaccacatcagatctgcaaatgtcctttgtcttatactcttatgcatggccatggatggacgattggccaatatgcttactctctatgtaaccgtgcatcaaaccaaacagccaaaaacgaaccattgttgattcactgtttcaatattattgatcatcagttgaagttttgcgcatgaaccatcatagatgatcagttatgcataaaagacctctaatcaactagttccaatatataagttatgcatatgtgagtcttacctcatatatatcgtactaaaacaatagaagcagtggattaatccagatttcatacttgtagtgtctttcctgttgcagtatctttgcgtgcagctcatgtgttcttgttttgtagcatcttatctcgagtgagtttgatagcagtgcataggtgacagagcacacgatgattatattcacatgggttgtttttcaatgtaaaaatcagggtgcgaagtctctgtaccatcgtgaaaacagcctacaggtggaaaccagcccacggcagggagcagcaacatcgaactgaagactgcaaaagtacaaaaaggaaaaaaaaaagtacacctgacagacgcaatttctggttttttggaggtgtcgtctctcgtgtccgtttattcatttttgtaagattttagacgacgcgtatcgttctggataaaatttgctgtttgatttggtctccgttttctttgtaaaaatggtgatgctgtcgtgagctctgaacacgaagattttgttggtgctctgcaacctgcatattactagcttgggctatctcgttgtaagatttgcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0543700, RefSeq:Os05g0543700