Os11g0578700

From RiceWiki
Revision as of 21:21, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0578700

Description

Hypothetical protein

Version

NM_001074675.1 GI:115485998 GeneID:4350774

Length

1852 bp

Definition

Oryza sativa Japonica Group Os11g0578700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:23692775..23694626

Sequence Coding Region

23693631..23694494

Expression

GEO Profiles:Os11g0578700

Genome Context

<gbrowseImage1> name=NC_008404:23692775..23694626 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:23692775..23694626 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acaccatgcatgctgtacacatttgattctgacggcaccaaggcgacgggcctctacagcctcgtggagaagaaggcgtacgttttgccgctccaggatctacctaataggcatatcatagtgtcctgctatggctggattgtaaacgccgatgagagatcagagttgcaccttgtcaatcccatcactggcgagcagatcgccctgccatcggtcaccaccattgagcaggtgaagcccatctatgacgacgatgctgctgctgccaacgggtacaaatacttgtggcacacgggagaggtgacggtttccgactcgtcctcgatcctctattacaaggcatttgtgtcttgtgatccatccatgggaggaggatatactgtggtgctcatccacaatccgtattgccagctctcgttcgcaagggctggtgatgataagtggacatggctgcccccgtattccgactatgaggactgtttttttaaagatgggttgctgtatgctgcgactttgttaggagaaatacacatgtttgatcttaccgacccaaaggtcgcgccaaagatagttatgggtaaggtgaaggactttctgtatgagaatatttatatcgttgaagcttcatgcggtaacctactgcaaatttggcggtccgatgatctaccgaagtgggatgtaccggagggggatgaagatgatgatcactcgtttgattcagaatctgagttcgactctgagtcatatgtgtgtgatactaacacgatcaaggtacataaagtgagtttgacagaaggaaagattgtggaaataagtagcttggacgagaacttgctgtttcttgggcacggccaaacgctttga</cdnaseq>

Protein Sequence

<aaseq>TPCMLYTFDSDGTKATGLYSLVEKKAYVLPLQDLPNRHIIVSCY GWIVNADERSELHLVNPITGEQIALPSVTTIEQVKPIYDDDAAAANGYKYLWHTGEVT VSDSSSILYYKAFVSCDPSMGGGYTVVLIHNPYCQLSFARAGDDKWTWLPPYSDYEDC FFKDGLLYAATLLGEIHMFDLTDPKVAPKIVMGKVKDFLYENIYIVEASCGNLLQIWR SDDLPKWDVPEGDEDDDHSFDSESEFDSESYVCDTNTIKVHKVSLTEGKIVEISSLDE NLLFLGHGQTL</aaseq>

Gene Sequence

<dnaseqindica>857..1720#gtcccggccgccgccgccgcatctcgtctcctctggtatcccggcggcagccaccttctctccccgccggcgtggcggggcgccgccttccatcggtgtggacgtcggccggcggcggagggaagaagaagaacctggcggctggcgctacgagtccgagaaatcggaggccttctcgcagccggaggtttccgattttccatatggttagtaacaaaccaatcccactctgcttgttaatcagggcattggaaatggacaatggcggctgggatctgatcttatgtgatgccatatttttggcaaagagttggaaattcttttttgcccgaatccgtcgctcaatcgaagaaagggagtagttggggattaactcttcagtctcctattcggatagagattgattgctttacgagttatatatgtgcacctggaagaattatttgtcgcaagaatcactgcttgtcaactggggatttagagggggaaaacaaggaggaactctgaactggggtgttgctgctgccttcagtagttcagattcatgatattgacagtgtgagaagtttgggcaagcaaattttggggtttctgccaacaagcgattcggattcaattctgaatcctagaacagctgaaggaacaacaacaggacaagttaattgtagctgtgcaagtagtctgcttgataaatctctccatccatccagcactgatggagcttccacaggatgttttgatgagcatatttgccaccttggaggtccctgacctcgtccgggctggttccgtctgctcctcttggcgatccgcgtacacaagcatatgcagccttggacattgcaagccacagtagacaccatgcatgctgtacacatttgattctgacggcaccaaggcgacgggcctctacagcctcgtggagaagaaggcgtacgttttgccgctccaggatctacctaataggcatatcatagtgtcctgctatggctggattgtaaacgccgatgagagatcagagttgcaccttgtcaatcccatcactggcgagcagatcgccctgccatcggtcaccaccattgagcaggtgaagcccatctatgacgacgatgctgctgctgccaacgggtacaaatacttgtggcacacgggagaggtgacggtttccgactcgtcctcgatcctctattacaaggcatttgtgtcttgtgatccatccatgggaggaggatatactgtggtgctcatccacaatccgtattgccagctctcgttcgcaagggctggtgatgataagtggacatggctgcccccgtattccgactatgaggactgtttttttaaagatgggttgctgtatgctgcgactttgttaggagaaatacacatgtttgatcttaccgacccaaaggtcgcgccaaagatagttatgggtaaggtgaaggactttctgtatgagaatatttatatcgttgaagcttcatgcggtaacctactgcaaatttggcggtccgatgatctaccgaagtgggatgtaccggagggggatgaagatgatgatcactcgtttgattcagaatctgagttcgactctgagtcatatgtgtgtgatactaacacgatcaaggtacataaagtgagtttgacagaaggaaagattgtggaaataagtagcttggacgagaacttgctgtttcttgggcacggccaaacgctttgactccacgctgaagagtacctgcagctgaaggcaaatcatgtttacttcactgataataacgaactgtatctttttggatacaagaacaaccatcgtgatattggagtgttggacttggaaaatttccgccgt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0578700, RefSeq:Os11g0578700