Os05g0545400

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Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0545400| Description = Protein kinase-like domain containing protein| Version = NM_001062747.1 GI:115465224 GeneID:4339497| Length = 1367 b...")
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Gene Name

Os05g0545400

Description

Protein kinase-like domain containing protein

Version

NM_001062747.1 GI:115465224 GeneID:4339497

Length

1367 bp

Definition

Oryza sativa Japonica Group Os05g0545400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27137241..27138607

Sequence Coding Region

27137241..27138514

Expression

GEO Profiles:Os05g0545400

Genome Context

<gbrowseImage1> name=NC_008398:27137241..27138607 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27137241..27138607 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggcggtggcggcggcggcggcggtgagcaggcaatggacgagggtgcggacgctggggcgcggggcgtccggggcggaggtgttcctggcggcggacgacgcgtcgggggagctgttcgccgtcaagtccgtgggcgcggcgggcgcggcggcgctgaggcgggagcagggggtgatggccgggctgagctcgccgcacgtcgtcccctgcatcggcggacgcgtggggcgcgacgggtcgtaccagatgttcctcgagttcgcccccggcgggtcgctcgccgacgtggcggcgaggtgcggcgggcggatggaggagtgcgccgtcggggagtacgcggtggacgtggccagggggctcgcgtacctccacgggatggggctggtgcacggggacgtcaaggcgaggaatgtcgtgatcggcggcgacggccgggcgaagctcgcggacttcgggtgcgcgaggtgggcggattcgggccggccgatcggcggcacgccggcgttcatggcgcccgaggtcgcgcgcggggaggagcagagcccagccgccgacgtctgggcgctcggctgcacggtcatcgagatggccaccggccgcgcgccgtggagcgacatggacgacgtgctcgcggcggtgcaccggattggctacacggaggccgtccccgaggtccccggttggctgtccgccgacgcgaaggacttcttggccaggtgcttgcaacggcgccccattgaccggagcacggcggcgcagctgctagaacacccgttcgtcgcctccgccgccggcgacggcaagccggaggccgcgaagtccaaatgggtgtcccccaagagcaccctggacgccgcattgtgggagtccgacaccgacgaggaggaagacgacgagctgtcgcagagcacggccgagaggatcggttcactggcctgcgccgcctcgtcgctgccggattgggactccgacgacggctggatcgatgtgatctccacccctaccgaagaatcctgcgagaccaccacctcgccggccgacgaggagacgacgactgacctcaacggcgacatcagaaccgcagaattcgagcttccccacattgacgtggacagcggcaatggcaacaccacccacaatgtgggagaagccaatgctcagcacattatttccccttcgaatttagttttcgatcaagtactatgtaaaacaccattttgtaacaaacacattgcaattgaattcataccatgttttctcctcac</cdnaseq>

Protein Sequence

<aaseq>MAVAVAAAAAVSRQWTRVRTLGRGASGAEVFLAADDASGELFAV KSVGAAGAAALRREQGVMAGLSSPHVVPCIGGRVGRDGSYQMFLEFAPGGSLADVAAR CGGRMEECAVGEYAVDVARGLAYLHGMGLVHGDVKARNVVIGGDGRAKLADFGCARWA DSGRPIGGTPAFMAPEVARGEEQSPAADVWALGCTVIEMATGRAPWSDMDDVLAAVHR IGYTEAVPEVPGWLSADAKDFLARCLQRRPIDRSTAAQLLEHPFVASAAGDGKPEAAK SKWVSPKSTLDAALWESDTDEEEDDELSQSTAERIGSLACAASSLPDWDSDDGWIDVI STPTEESCETTTSPADEETTTDLNGDIRTAEFELPHIDVDSGNGNTTHNVGEANAQHI ISPSNLVFDQVLCKTPFCNKHIAIEFIPCFLLT</aaseq>

Gene Sequence

<dnaseqindica>94..1367#aaacaactcgccacaagttagctcaagctcgagacaaagagggaaccaacagaaaccaccacggcggcggcggcgcgacacatcaccggagagatggcggtggcggtggcggcggcggcggcggtgagcaggcaatggacgagggtgcggacgctggggcgcggggcgtccggggcggaggtgttcctggcggcggacgacgcgtcgggggagctgttcgccgtcaagtccgtgggcgcggcgggcgcggcggcgctgaggcgggagcagggggtgatggccgggctgagctcgccgcacgtcgtcccctgcatcggcggacgcgtggggcgcgacgggtcgtaccagatgttcctcgagttcgcccccggcgggtcgctcgccgacgtggcggcgaggtgcggcgggcggatggaggagtgcgccgtcggggagtacgcggtggacgtggccagggggctcgcgtacctccacgggatggggctggtgcacggggacgtcaaggcgaggaatgtcgtgatcggcggcgacggccgggcgaagctcgcggacttcgggtgcgcgaggtgggcggattcgggccggccgatcggcggcacgccggcgttcatggcgcccgaggtcgcgcgcggggaggagcagagcccagccgccgacgtctgggcgctcggctgcacggtcatcgagatggccaccggccgcgcgccgtggagcgacatggacgacgtgctcgcggcggtgcaccggattggctacacggaggccgtccccgaggtccccggttggctgtccgccgacgcgaaggacttcttggccaggtgcttgcaacggcgccccattgaccggagcacggcggcgcagctgctagaacacccgttcgtcgcctccgccgccggcgacggcaagccggaggccgcgaagtccaaatgggtgtcccccaagagcaccctggacgccgcattgtgggagtccgacaccgacgaggaggaagacgacgagctgtcgcagagcacggccgagaggatcggttcactggcctgcgccgcctcgtcgctgccggattgggactccgacgacggctggatcgatgtgatctccacccctaccgaagaatcctgcgagaccaccacctcgccggccgacgaggagacgacgactgacctcaacggcgacatcagaaccgcagaattcgagcttccccacattgacgtggacagcggcaatggcaacaccacccacaatgtgggagaagccaatgctcagcacattatttccccttcgaatttagttttcgatcaagtactatgtaaaacaccattttgtaacaaacacattgcaattgaattcataccatgttttctcctcac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0545400, RefSeq:Os05g0545400