Os05g0545500

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Revision as of 10:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0545500| Description = Conserved hypothetical protein| Version = NM_001062748.1 GI:115465226 GeneID:4339498| Length = 3818 bp| Definition ...")
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Gene Name

Os05g0545500

Description

Conserved hypothetical protein

Version

NM_001062748.1 GI:115465226 GeneID:4339498

Length

3818 bp

Definition

Oryza sativa Japonica Group Os05g0545500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27146474..27150291

Sequence Coding Region

27146766..27147608,27147984..27148508

Expression

GEO Profiles:Os05g0545500

Genome Context

<gbrowseImage1> name=NC_008398:27146474..27150291 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27146474..27150291 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcggcggtggagcggagggagcattcccggaggtcggggcgctcgaggtcgcgctcgccggcgagggaccggggctcgccgccgcgcaggagggagaggtcgccggctgcgaggagtcggtcgcctaggaggaggtctcctgttaagtctactagctcacatagggagaggtcgcctgttcggaggaatggctcacctaggaggtctcctgttaggagtattgggaggtcgccacaaagagatagggtgaaggagcaggtcaggtcaccgaaacagtcatggtcacggtctccgtcacctgccaggaaacgggagtcttggtcgccatcgccgcagagcaaacggctgagaagggctcagagtgagcgggaaggtgcagatgctactgagggtgaccgccggaagaccaccagggagcgtgatgagggaaaggatgtgtcaagggatagaaaggctgagagggaggagggctcttttaaggacaggaaactggattgcgatgatgatagggatcactcaagagatagaaggtctgatcggtcgggtgcttcaagggagacatggtcaagccgagattatgaagggcgtgattcaaggggtagaaggtctgatggggatgatcaaaaaggcatttgcagggagcaaagggcagatcatgatgatagaaaggattctgcaagagagagaagggcagaccgggatgagagcaatggtgaatcagggagatcatctaggcgtgggcgatcagtgtctccagaagagcataggcataggggtagacatgaatcccaatcccaccagtcaccgaggtcatctagaagtgcagcacgtggtgagggacattctgattggaagaagtttaggccaggcttgccggaatatttgcctgaaatggaccgaatgtttgagggtgttgctgtggatggttccgcatcgtttgtggccactgccgaggagcctatagagtgtgatagctctgacgaagcggatggtgatgagcaagaggacgagctgacccctcttagtgttggcaacaaaaggacgagtccaagtaaaaagtccaagagtccagcagtgagggcaatggttagcaacatgagggagtacaatgaccttcaaaggagcaaaatcagcctaatgcaatccatgttgcaagttatgcaggatgtcgccgaagccaaacggaaagccgccgaagccgaaaggagagccgcggaagcccatatgatagccgccgaagctcaagccaacgctcatgagatgaagattaaaaaggtactcgagatggccggagtgtggggtcactccagaaggaagcccaaagctgttcatgggcgtggtcaacattacccagaatggtag</cdnaseq>

Protein Sequence

<aaseq>MASAVERREHSRRSGRSRSRSPARDRGSPPRRRERSPAARSRSP RRRSPVKSTSSHRERSPVRRNGSPRRSPVRSIGRSPQRDRVKEQVRSPKQSWSRSPSP ARKRESWSPSPQSKRLRRAQSEREGADATEGDRRKTTRERDEGKDVSRDRKAEREEGS FKDRKLDCDDDRDHSRDRRSDRSGASRETWSSRDYEGRDSRGRRSDGDDQKGICREQR ADHDDRKDSARERRADRDESNGESGRSSRRGRSVSPEEHRHRGRHESQSHQSPRSSRS AARGEGHSDWKKFRPGLPEYLPEMDRMFEGVAVDGSASFVATAEEPIECDSSDEADGD EQEDELTPLSVGNKRTSPSKKSKSPAVRAMVSNMREYNDLQRSKISLMQSMLQVMQDV AEAKRKAAEAERRAAEAHMIAAEAQANAHEMKIKKVLEMAGVWGHSRRKPKAVHGRGQ HYPEW</aaseq>

Gene Sequence

<dnaseqindica>293..1135#1511..2035#ggattgctctgcgaagccgagccctcacagatagagaagaaaccctcgcttcgccgcttcgccggcgcggctggccggccgccaccggcgataacctcgccgccgacgactccgcatccgcttccgccgcagtccgccgcacccggtacgctccccttcctccctccctctctcttttttttggcggctcctcggactgaggccgcacaaaaccctagcgattccgcgatttttcttcgtagtgctgttctgaatcggtttggtttgggggtgatgctgctccaggtggggaatggcttcggcggtggagcggagggagcattcccggaggtcggggcgctcgaggtcgcgctcgccggcgagggaccggggctcgccgccgcgcaggagggagaggtcgccggctgcgaggagtcggtcgcctaggaggaggtctcctgttaagtctactagctcacatagggagaggtcgcctgttcggaggaatggctcacctaggaggtctcctgttaggagtattgggaggtcgccacaaagagatagggtgaaggagcaggtcaggtcaccgaaacagtcatggtcacggtctccgtcacctgccaggaaacgggagtcttggtcgccatcgccgcagagcaaacggctgagaagggctcagagtgagcgggaaggtgcagatgctactgagggtgaccgccggaagaccaccagggagcgtgatgagggaaaggatgtgtcaagggatagaaaggctgagagggaggagggctcttttaaggacaggaaactggattgcgatgatgatagggatcactcaagagatagaaggtctgatcggtcgggtgcttcaagggagacatggtcaagccgagattatgaagggcgtgattcaaggggtagaaggtctgatggggatgatcaaaaaggcatttgcagggagcaaagggcagatcatgatgatagaaaggattctgcaagagagagaagggcagaccgggatgagagcaatggtgaatcagggagatcatctaggcgtgggcgatcagtgtctccagaagagcataggcataggggtagacatgaatcccaatcccaccagtcaccgaggtcatctagaagtgcagcacgtggtgaggtgtgtaatgatatctgacccttttcttatacatatccacctgttagttggcatactatgttcttttgtttcatgtttgtcccttgttgctgttctttgtctgataacctgcacccaaatgaatagaaagtgaaaaaaattatgccttgttatcagcattgttgacactaaacttgtgggtctgtattccatgtaaacccttcttgcttcagagttcagattctagaggatataattagttacccgctatccttttcatttcatactaatgtggtttcttttcatgtttgctatcatatgtggcccgtaagttgcaacctaaactttgtatttgatttgtttcaggacttcatgccatatgacttctttgtgcagggacattctgattggaagaagtttaggccaggcttgccggaatatttgcctgaaatggaccgaatgtttgagggtgttgctgtggatggttccgcatcgtttgtggccactgccgaggagcctatagagtgtgatagctctgacgaagcggatggtgatgagcaagaggacgagctgacccctcttagtgttggcaacaaaaggacgagtccaagtaaaaagtccaagagtccagcagtgagggcaatggttagcaacatgagggagtacaatgaccttcaaaggagcaaaatcagcctaatgcaatccatgttgcaagttatgcaggatgtcgccgaagccaaacggaaagccgccgaagccgaaaggagagccgcggaagcccatatgatagccgccgaagctcaagccaacgctcatgagatgaagattaaaaaggtactcgagatggccggagtgtggggtcactccagaaggaagcccaaagctgttcatgggcgtggtcaacattacccagaatggtagcgcgatggatgcattcattcacacctgtccagcaggaaggatgctcatcatcaagaaatatgttgaggtcgacaactagtccatctcatgttctgttgtgtcattaattttaagttcatgtattattgtctgtttgttcaatcctgtgtatgattatgtatgtgtgtactatggttgtgatgtctgttatatgaacattgttatggtactaagtgtgatgcacttttaatacattgctgatttgaactatgtgctgcatggctgagatttatttgcaaatgttttgttattctttactaacataactcattgtttgctttgacaggatgcagggcagtcgttgtcgtcatcattctcgtcgcggtcgtcgttattctcgtcattctcgtcgtggtcgttgtcagcatcccacaatcgtcgtgctcgaagacagcgcatggatgaagacttaaacaagatgatgttggacttgttggacgatgatgacgaaggtttcttccacgttatgtttcagtatgccatccacattgacaagcatttgactagagtgagtataggcaacctgccttgactgggttgtaatgggtacataataagcttggggatagaaaggcatgttataacatgtttagaatgagtccaactatgttcctcctcctgcatgacctattggttcagtcctatggcctaaaatctagtagcaaatccacctcggtagaagctcttgcgatgtttctttggatggttggcaccccacaatcagttaggcaagctgaggacagatttgagaggtccatggggactgtaagtagcttgtttaacaaagtgttgcagtctgtggtcaagcttgctgttgatgtcataaagcctgtggacccgcaattcagaacaatgcacccaagactgaggaaccgtaggttctatccctacttcaaggattgcataggggctatagatgggactcatgtcccttgcgtggtgccaaacaacaagttcatgcagtacttgtgccgcaagggcatgaccacacaaaatgtcatggctgcatgtgacttcgacatgaggtttacatttgtactatctggatgggcctggttcggtacatgacatgagagtatttgatgatgcacactcaacatacaaccatgtgtttccacatcctcctacaggtatagtgttgcattgtacttcattttgatttgttagttgtagaatgtggcactaactgatgtttcttgctgtaggaaagtattaccttgtggactccggctaccctaaccggccaggttaccttgcaccttacaagggaaccaaatatcatctacaggagtatcgagacagccctgaacctcaaggtaaggaagaaaaattcaactatgcacactcatctcttaggaatgtcattgaaagatcatttggagttttgaaaatgaagtggcgcatgttggaaaaaggtctctagttatgctcctaataaacaggccaaaatcatagttgcatgctgtgctctccataacttcattagggttagtggcatacgggataagcactttgatcgttgtgaccgtgatgagaactatgtgccctcacaagctactgccgatcagcctgagacagaagaagtgtttgatgattgcgatccgatgaatgcatttcatgattccattgcactttgtttggttaaccgttcttgaaagttgtttgtaaagcacaaacatggttatgtactgtaatgcttgcgactgctgtgtatgtttgagaacattttttcggttcctattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0545500, RefSeq:Os05g0545500