Os09g0556400

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0556400| Description = Major facilitator superfamily MFS_1 protein| Version = NM_001070433.1 GI:115480608 GeneID:4347820| Length = 3858 bp|...")
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Gene Name

Os09g0556400

Description

Major facilitator superfamily MFS_1 protein

Version

NM_001070433.1 GI:115480608 GeneID:4347820

Length

3858 bp

Definition

Oryza sativa Japonica Group Os09g0556400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22938994..22942851

Sequence Coding Region

22939405..22939518,22939609..22939695,22939900..22939952,22940034..22940175,22940441..22940536
,22940686..22940722,22941156..22941271,22941652..22941666

Expression

GEO Profiles:Os09g0556400

Genome Context

<gbrowseImage1> name=NC_008402:22938994..22942851 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22938994..22942851 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaattcactaaaggatgttccttggagagaatttttcaaaagcaaggcagtgtgggcaatgatatatgctcacttttgtggaagctgggggcactatacttgcttgtcttggctaccaacattctttagtgaggagctggacctgaatttgactgaagcagcatgggtgtcagtccttcctcctttgggctcaatgatcattacatctattgctgcaccttttgcagacaacttgatatcaaatggagtagacaccacaaaggtacgaaagatatgtcaaacaattgcatttctgtcacctgcaactttcatgatgctttcctctgtggatcttggtgtgccaccgtgggaaattgttgcttttcttacaagtggtctggcactctccagcttcgcattgtcaggtctttattgcacccatcaagatatttctcgtgagtatgcaagcattctgctgggcatcacaaacactgtaggtgctgtacctggaatagttggcgttgcactaacaggctatcttcttgatacaactcattcttggagtatatcacttttcgcaccttcgatatttttttacctgacgggtactgctgtctggctagcatttgccagcagtgagcctcaggagttttcgaagtcagaaccggagtcgtcgtga</cdnaseq>

Protein Sequence

<aaseq>MNSLKDVPWREFFKSKAVWAMIYAHFCGSWGHYTCLSWLPTFFS EELDLNLTEAAWVSVLPPLGSMIITSIAAPFADNLISNGVDTTKVRKICQTIAFLSPA TFMMLSSVDLGVPPWEIVAFLTSGLALSSFALSGLYCTHQDISREYASILLGITNTVG AVPGIVGVALTGYLLDTTHSWSISLFAPSIFFYLTGTAVWLAFASSEPQEFSKSEPES S</aaseq>

Gene Sequence

<dnaseqindica>3334..3447#3157..3243#2900..2952#2677..2818#2316..2411#2130..2166#1581..1696#1186..1200#ggtaggtattggagaaggtgtatcaccatcagctgctacagatttgattgcaaggcaagattgagtaaacatttttccttaaaaacatccttaccattttcattttcttagtgctaatttggtagccatctaaaatatctaatcatctggacatatgcttattagattttttattagagtgccgccctgtgttttttgtatgatggtaaattttgtggtttgtaaaatctgatgtaaccaactaatgtgtcttcatttttcatgactattgtttgaaattttagttgttcagatgaattattttgtagctaactgtgcagaatagcaagtggtggttacattttttttttactttcagctgttgaatgatacataaaaataatatttcctgcttcttagttcttatggatttctcacagtgattcgtacgtacatttcacaatagtagtccagttgtcattggctttctatatttgagatttttattaaggaactttgtattacttgtatgcataacaggaatcccatagaaatttgactcttcttcctgctgagatgttaattatattaaacataatgtagtaagtacaattgtgcctgatccctaactgaaaaataaaaatagaacaaaaacaccaaactgttatgaccttttggatcctcatggactattgtttcataacttttaactgttatggctgcccatacaggtccatccctgttcaagaacgatcaagagcagttgctgttgtgtttggtggtttgagctttggaagcgtattagggtatgtgttttcaggtattttgtggtacatatgcacgcttgttcacaattctgccagatagttaattccatatacattgtttggcattacagactattgttcgccccacctattattcagaaccttggctgggaatctgtcttttacatatttggacttcttggaattatttggtgaggaaacatctctaataagcagatgaaatattatttattctgtttaacttcccattcatttttttcataggtgtctagggtttcaatctcttaaagaacaacagttaaggggcaatgaagatatacaagtaatacaagatttggggcagagtccttctggatcaagtgacctcatctcgtcctctgtgtctccaaaatcatcggagtcatcattgggagagctgatgaattcactaaaggttctatttttcaccagatgaaatagttctgccataatctctgttatgacctagaagtatattgatggattaagttacaagactgttctcaagttgggtcatttgtgaagtcaaagtatcaaaatcatggcatggggactatgtgatttgatgctctattgttcataaaatataccaaactgaataactactagttcgaatggttcgagattctattcacctcacctgttgcagatgtgatcattcccaaataaacaaatatggtttgcaatatgaccaggaaaattttttagtgcattattatctctagacaaatcttgaagtagagttctttatacatgtgattatgcggccaacattgcaactttctttttctttaggatgttccttggagagaatttttcaaaagcaaggcagtgtgggcaatgatatatgctcacttttgtggaagctgggggcactatacttgcttgtcttggctaccaacattctttaggtatggtctttggtgttttacacaggtcttgacattttgtttctcttactttttggctcagtgtagattaattgtctctattttgtttaaatgagtagtgcatagttggatagcagctatcaacttagtgctgctgtggagagtgaagtgcttagtttcattgaccatgttttctctttcatttcagtcattttcttaaatgtccatacatgttgttttgggattcagttttatgaaaatggtttgactacgaaaataggaccaaacaaaaaatagatggtttagaattttgcatttgatttttccaaaaaaaaaaactggtttttaaagatcatggtctgatcatttgctatttgtacaatacataatgccaagtttatgccgataacatgtttttgttcttgcaattcattactgttcaaatgatatgcagtgaggagctggacctgaatttgactgaagcagcatgggtatgtacatgcttccttaaaattgtagtgagattcttctattcaatgcttcatttcctcctcactagggaaagtctgttttcccttatttttcattgatgaatgcaatttctgtcatgagagcttatggttttacatatttgctgtaggtgtcagtccttcctcctttgggctcaatgatcattacatctattgctgcaccttttgcagacaacttgatatcaaatggagtagacaccacaaaggtcaggcctttactttcttaattttgtgctgatgataaaatgatttttctctttattttatttatatttactttaggaaataggaagtggttctgtaaataattctaggaatcatttgtaaaggccagaatagtaaacttgtcaggggtgcctgtgttatattctgtatcctgacaggatgttctgttttcttgtggagaactggaaagtgagctatctattgcgggaaattaaagtatctatatctgttaaattttttctataggtacgaaagatatgtcaaacaattgcatttctgtcacctgcaactttcatgatgctttcctctgtggatcttggtgtgccaccgtgggaaattgttgcttttcttacaagtggtctggcactctccagcttcgcattgtcaggtcatgttgttaagcttcccatgagcataccattttctgtgtttgcaagatctaaagctaaatattctggttgataaacaggtctttattgcacccatcaagatatttctcgtgagtatgcaagcattctgctggtaaggcagcatcagtctgtcctctcattttttcttcatttgtattcttgaaaaggaattgaaaaataagagcaatccttcacagtgtgtgtgcttaaagctcgacagattcatttgttttagttcttttatttgtacttgatattagctgcagcactgtacttagtctcagatggctgctctaacttgtttcttgtgtttcagggcatcacaaacactgtaggtgctgtacctggaatagttggcgttgcactaacaggctatcttcttgatacaactcattcttggagtgtatgtcatcatcacagtctaatccatcttcataacctatagtttttcattatgaactgttctaatctcatagttctcttttatgtgcagatatcacttttcgcaccttcgatatttttttacctgacgggtactgctgtctggctagcatttgccagcagtgagcctcaggagttttcgaagtcagaaccggagtcgtcgtgagtcatgacttggatggcaaatagtatatacagttcccagaggggatcagttcaggaagaattttgtcagatgtagtttccctggcaaagcgttggatttttggacattggacaggagaatacagctcattggatattggcaaatttttggccaattttagtttaggcttttgtgtagcgagtgtcatttcacgttctgacacgatttccttttccattacggggagttgcgttgttttctgcagtagtatcccaggtaacggtagaagaagtaaatttgttgtatcatatgacatctttgggtatatgtgatgattgatggagttcattacgacgtgatccttgaccatgtatttagtgaattcttgccagttcgatattatggataaagttagtgttttcgttttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0556400, RefSeq:Os09g0556400